Chrysemys picta (western painted turtle): 101931561
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Entry
101931561 CDS
T04662
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04514
Cell adhesion molecule (CAM) interaction
cpic04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
101931561 (LRRC4B)
04517 IgSF CAM signaling
101931561 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpic04515
]
101931561 (LRRC4B)
Cell adhesion molecules [BR:
cpic04515
]
Immunoglobulin superfamily
NGL family
101931561 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
LRR_At5g56370
LRR_EndoS
LRR_RPS2
DUF7617
Insulin_TMD
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
101931561
NCBI-ProteinID:
XP_042703108
UniProt:
A0A8C3FV43
LinkDB
All DBs
Position
17:24246554..24265300
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AA seq
645 aa
AA seq
DB search
MAAPRCCSRRGLPPPRPSRMFWKPVLLLGFWLPSLAWAGASPTSCPAACSCSNQASRVIC
TRRELVEVPESISINTRYLNLQENNIQLIKTDTFKHLRHLEILQLSKNLIRKIEVGAFNG
LPNLNTLELFDNRLATVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL
KKLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDMIRPGSFQGL
TSLRKLWLMHAQVSTIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP
WHCNCDVLWLSWWLKETVPNNTTCCARCHAPANLKGRYIGELDQSHFTCYAPVIVEPPTD
LNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTG
QYTCMVTNSAGNTTASATLNVSAVDPAATGYTYFTTVTVETLETAQEDALPTKKEPGPTP
AVGWDVTYSTTSLTPRSTRSTEKPYTVPITDAAEGGMKDLDDVMKTTKIIIGCFVAITFM
AAVMLIVFYKLRKQHQFHKHHGPTRTIEIINVEDELPAAAGAPGDSHLALPALEHDHLNH
YAAFKAHYNNNAGALACAKNPLLNSIHEPLLFKSSSKENVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccccgttgctgctcccggagggggctgccacctccccgtccctctaggatg
ttctggaagccggtcctgctcctggggttttggctgccctcgctggcgtgggccggagct
tcgcccacttcctgcccggccgcctgctcctgcagcaaccaggccagccgggtgatctgc
acgcgccgggagctggtggaggtgccggagagcatctccatcaacacgcggtacctcaac
ctgcaggagaacaacatccaactcatcaagaccgacaccttcaagcacctgcggcacctg
gagatcctgcagctgagcaagaacttgatccgcaagatcgaggtgggcgccttcaacggc
ctgcccaacctcaacacgctggagctcttcgacaaccgcctggccacggtgcccacccag
gccttcgagtacctctccaagctgcgggagctctggctgcggaacaaccccatcgagagc
atcccgtcctacgccttcaatcgggtgccctccctgcgccgcctggacctgggcgagctg
aagaagctggagtatatctccgaggcggccttcgaagggctggtgaacctgcggtacctg
aacctgggcatgtgcaacctcaaggacatccccaacctgacggcgctggtgcggctggag
gagctggagctgtcgggcaaccggctggacatgatccgccccggctccttccagggcctc
accagcttgcgcaagttgtggctgatgcacgcccaggtgtccaccatcgagcgcaacgcc
ttcgacgacctcaagtcgctggaggagctgaacctgtcccacaacaacctcatgtcgctg
ccccacgacctcttcacccccttgcaccggctggagcgggtgcacctcaaccacaacccc
tggcattgcaactgtgacgtcctctggctcagctggtggctgaaggagacggtgcccaac
aacaccacctgctgcgcccgctgccacgccccggccaacctcaaggggcgttacatcggc
gagctggaccagagccacttcacctgctacgcgccggtcatcgtggagccgcccaccgac
ctcaacgtgacggaggggatggcggcggagctgaagtgccggacgggcacctccatgacc
tcggtcaactggctgacgcccaacgggacgctgatgacgcacggctcgtaccgggtgcgg
atttccgtcttgcacgacggcacgctcaacttcaccaacgtgacggtgcaggacacgggg
cagtacacctgcatggtgaccaactcggccggcaacaccacggcgtcggccaccctcaac
gtctcggccgtggacccggccgccaccggctacacctacttcaccaccgtcaccgtggag
acgctggagacggcccaggaggacgcgctgcccaccaagaaggagccgggccccacgccc
gccgtgggctgggacgtgacctactccaccacctccttgacgccccgctccacccgctcc
acggagaagccctacaccgtgcccatcaccgacgcggccgagggcggcatgaaggacctg
gacgacgtgatgaagaccaccaagatcatcatcggctgcttcgtggccatcaccttcatg
gcggccgtcatgctgatcgtcttctacaagctgcgcaagcagcaccagtttcacaagcac
cacggccccacccgcaccatcgagatcatcaacgtggaggacgagctgccggctgcggcc
ggcgcccccggcgacagccacctggccctgccggccctggagcacgaccacctcaaccac
tacgcggccttcaaggcccactacaacaacaacgcgggggccctggcctgcgccaagaac
ccgctcctgaactccatccacgaacctctgctgttcaagagcagctcaaaggagaacgtg
caggagacgcagatctga
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