Chrysemys picta (western painted turtle): 101932178
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Entry
101932178 CDS
T04662
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X3
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04270
Vascular smooth muscle contraction
cpic04625
C-type lectin receptor signaling pathway
cpic04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101932178 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
101932178 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
101932178 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpic04131
]
101932178 (ARHGEF12)
Membrane trafficking [BR:
cpic04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101932178 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
101932178
NCBI-ProteinID:
XP_008162754
LinkDB
All DBs
Position
13:8865640..8970254
Genome browser
AA seq
1538 aa
AA seq
DB search
MSGTQSTITDRFPLKKPTRHGSILSRETPADKKQKVERCSSAHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVIIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTNSNHGDVVKLIKSGSYVALTVQGRPPGSSQIPLADSEVDPAAFGHMSPIMTSPHSP
GTSGNAERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQSLQEDYSRAPTSRLLKEI
QETKKHIPQLQEQLSKATGSTQDGVLASRSVTESLQISEVEAESGDGLSKIDYSSGDGSR
PNSDIADSPRSGLKERISLEESPDKSEIQDTDSQSSIGSPSSRMAPQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYTDLYKQTNSKETRRVF
LEFNQFFLDRAANLKVPVPDEISIDLEKRRPELIPEELHRHYIQTMQDKVYPDVQRHLED
FRQKRSMGLTLAENELTKLDAERVRDRITLERERACAEQIIIKIEEVLMTSQPLEEDKSS
TMQYVILTYMKYLGVKVKEPRSLEQKRGRIGFLPKIKQSIKKEKEGEEKVKRRGFPSILG
PPRRPSRHDSSAIGRAMEIQKQRHPKHLSSASSVSPEPPDLVKMRQSGSSSDGTDTTCPP
ANPMSPLAMGPFTSPEGSKDSETGPKQSGDAPPPSDSMDGTPRTPNTIFDFPSPPLDQLQ
EEEGELDRLADLGTPKPFRKMDSVGFGDIQSEDELFDFDTETDPPNWQQLVSQEVLLGLK
PHEIKRQEVINELFYTERAHVRTLKVLHQVFYQRVLREGILTPSDLRKIFSNLEDILLLH
TGLNDQMKAVRKRNETSVIDQIGEDLLTWFSGAGEENLKHATATFCSNQPFALEVIKSRQ
KKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYSERPEEKESVKK
AADHCRQILNYVNQAVKESENKQRLEDYQRRLDLSYLKQSEYPMLDEIRNLDLTKKKMIH
EGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLRCHSKILASTSDSKHTFSPVIKL
NTVLVRQVATDNKAFFVISMSENGAQIYELVAQTVSEKTVWQDLIARMAGTVKVEASKRP
IPLPQSGPGDEEREEEEQQKLKEEQHDIPASGMQSPDKDLGLESPLMLKTQSPSAIMAEK
SEVEDLLGTETHFEKDQRAEESSACYGPPVPFQISEERWALDALRNLGLLKQLLVQQLGM
AEKGTLEDWRCFPRYRTVSRGGQAESGIQRGLQHSDDKMQQPGTDQMPPGTGTSESAACY
GLRTSTEFPASQDAVQLGSRDARFSNNLVMDHVNMNLETPTPELEGVGADDSGEHFFDAR
DAHSDENPLEGEVMERKEDEEVHLRISGNYLILDGYGTVQESSTDEDVSSLVLQCTAGHS
SLDSAHQQPISPRDAQSDEGSSPFAEEFMASRWGPVDELCSDAPSPHLSVESRIQIMQYI
QKIEADLEHLKEVEENYTTLLRQRLAGSAPTDEHSDKS
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaacctacaaggcat
ggcagcattctgagcagagagactccagctgacaagaaacagaaggttgaacgctgcagt
agtgcacacgacttcgatccgacagatagctcctccaagaagacaaagtctagctcggag
gagagtagatccgagacgtatggtctcgttcagcgctgcgttatcatccagcgggatgaa
aatggatttgggctgacagttagtggagacaatccagtctttgtgcagtcagtcaaagaa
gatggagcagccatgcgggctggagtgcagacaggtgatcgaatcatcaaggtgaatggg
actcttgtaacaaactcaaaccatggggatgtggtgaagctgatcaagtcgggttcctat
gtagctctcactgtgcaggggcgcccaccagggtcgtcccagattccattagctgattct
gaagtggatccagcagcatttgggcatatgtctcccatcatgacatctccccattcgcct
ggcacatctggaaatgcagagagaattactagcccggtgctgatgggggaggagaacaat
attgttcacaaccagaaagtggagattctgagaaagatgctgcagaaagagcaggagcgg
ctgcagtccttgcaagaagattacagccgagcgcccacctcgcgcctgcttaaggagata
caggaaactaagaagcacatccctcagctgcaagagcagctgtccaaagccaccggctct
actcaggatggagttttggcctccagatctgtgacggagtcactgcagatcagtgaagta
gaggctgagagtggggatgggctgagcaaaatagactacagcagtggtgacggctcccgg
ccgaacagtgacattgctgatagtccccggagtggcctgaaggaacggatttccctggag
gagagtccagataagagtgagattcaagatactgattctcaatccagtattgggagtccc
tcctcccgcatggcacctcagatcatcggagcagaggatgacgactttgacactgaacag
gagcagattaatgggcaatgcagctgtttccagaacatcgagctgctgaaatctcgcccg
gctcacctggctgtgttcctgcatcatgtggtgtcccagtttgacccagcaacgctgctc
tgctatctttacacggacttgtacaaacagaccaactccaaagagactcgtcgtgtcttc
cttgagtttaaccagttcttcctggaccgagctgcgaatctgaaggttccagttccagat
gaaatatctattgatctagaaaaaagaaggccagaactcattccagaggaattgcaccgc
cattatatccaaactatgcaagataaagtctatccagatgtccagaggcatctggaagat
ttcagacagaagcgtagcatgggattgacgctggccgaaaatgaactgaccaagctggat
gcagaacgtgtccgtgaccggatcacgttggagagagagcgagcgtgtgcggagcagata
attatcaaaattgaggaggtgttgatgacttctcagcctctggaagaggacaagagttca
accatgcagtatgtgattctcacctacatgaaatatttgggtgtgaaagtcaaggagccc
cggagcctggagcagaaacgtggacgtattggtttcctgccaaagataaagcaaagtata
aagaaagagaaagaaggggaggaaaaagtgaagaggagaggcttccccagtatcctggga
ccaccacggagaccaagtcgccatgacagcagtgcaattggcagggccatggaaattcag
aagcagcgccatccaaagcacttatcctcagcctcttcagttagtccagagccgccagac
ttggtcaagatgcgccagagtgggtcctccagtgatggtacagacactacatgccctcct
gccaatcctatgtctcctttagctatggggccctttacctccccggagggaagcaaggac
agcgagacaggccccaagcagtctggagatgctccacctcctagtgactctatggatggc
acgccccgcacacctaacaccatctttgatttcccatcccctccgctggaccagctgcaa
gaggaggaaggagaacttgatagattagctgacttgggaacaccaaaacctttccgaaag
atggacagtgtgggctttggggatattcagagcgaggatgagctgtttgattttgacact
gagactgatcctcccaactggcagcagctggtgagccaagaggtgctgctggggctgaaa
ccccacgaaatcaaacgccaggaagtgattaatgagctgttctacactgagcgagctcac
gtccgcacgctgaaggtgctgcatcaggtcttctaccagcgtgtactccgtgaaggcatc
ctgaccccctctgacctgcgcaaaatcttttcaaacctggaggatatccttctgctccac
actggtttgaatgatcagatgaaagctgtccgtaaacggaatgagacctctgttattgat
cagattggggaagacttgctaacctggttcagtggagcaggcgaggagaacctgaaacac
gcaactgccaccttttgtagtaaccagccttttgctctagaggtgatcaaatcacggcag
aagaaagactctcgcttccaaacctttgtgcaggatgctgagagcaatccactgtgtcgc
cggttgcagctgaaagatatcattcccactgagatgcagaggctgactaagtaccccctt
ctgctggataatatcgctaagtactcagaacggcctgaggagaaggagagtgtgaagaaa
gcagcggatcactgccgtcagatccttaactatgtgaaccaggcggtcaaagaatctgag
aataagcagcgtttggaagattatcagcgtcgccttgacctatcctacttgaagcagtca
gagtaccctatgctggatgaaatcaggaatttggatttaaccaagaagaagatgattcac
gaaggacctctgacctggaaagttaatcgggacaagactattgatctctacacgctactc
ttggaggatattctagtgctgttgcaaaagcaagatgataaactggtgctgaggtgtcac
agtaagatcctggcatccacttctgacagcaaacacacattcagtcctgttatcaagctg
aacactgtgctggttcgccaggtggcgacagataacaaagctttcttcgtcatctccatg
tcagaaaacggcgcccagatttatgaattggtggcacagactgtttctgaaaagactgta
tggcaggacctgatagctcggatggcagggacagtcaaagtcgaggcatctaaaaggccg
attccattaccacaatcgggacctggcgacgaggagcgtgaggaagaggagcagcagaag
ctgaaagaagaacagcatgatatccctgccagcggtatgcagagtccagataaagatttg
ggacttgagtctcccttgatgctgaagactcagtctccttcagcaatcatggctgagaag
tccgaggtagaagatcttcttgggactgaaacacattttgagaaagatcaacgggcagaa
gaatcttctgcatgctacggaccaccagtccctttccagatctcagaagagcggtgggca
ttggatgcgttaagaaacttgggcttgctgaagcagctgttggtgcagcaactgggcatg
gctgagaaggggacccttgaagactggcgatgttttcccaggtataggaccgtttcccgg
gggggccaggcagagagtggtatccagcgtggactgcagcattctgacgacaagatgcag
cagcctggaacagaccagatgcctcccggaacaggaactagtgaatctgcagcttgttat
ggcctccggacttcaaccgagtttccagcttcacaggatgctgtgcagctggggtctaga
gacgccaggtttagtaacaatttagtaatggaccatgtgaacatgaacctggagacccct
accccggagctggaaggggtgggtgctgatgacagtggagagcacttctttgatgctcgt
gatgcccacagcgatgagaacccattggaaggtgaagtaatggagaggaaggaggatgag
gaggtgcacttacggatctcaggaaattatttgatccttgatggatatggaactgtgcag
gagagctctacagatgaggacgtgtcctctctagttctacagtgcactgccggccactcc
tctttggactcggcacaccagcagccgatttccccacgagatgcccaatcagatgaaggg
agctccccgtttgctgaggaatttatggcctcgcgctgggggccagtggacgaattgtgc
tccgatgcaccgagcccccatctctccgtagagtcgcgtatccaaataatgcagtacatt
cagaagatagaggctgaccttgaacacttaaaggaagttgaggaaaattacaccactctc
cttcgccaaaggctggctggctcagcccccacagatgagcattcagacaaaagttag
DBGET
integrated database retrieval system
