Chrysemys picta (western painted turtle): 101932281
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Entry
101932281 CDS
T04662
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpic01009
]
101932281 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101932281 (HDAC6)
04131 Membrane trafficking [BR:
cpic04131
]
101932281 (HDAC6)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101932281 (HDAC6)
Enzymes [BR:
cpic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101932281 (HDAC6)
Protein phosphatases and associated proteins [BR:
cpic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101932281 (HDAC6)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101932281 (HDAC6)
Membrane trafficking [BR:
cpic04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101932281 (HDAC6)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
101932281 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101932281
NCBI-ProteinID:
XP_042701757
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MRDQLLQGDEVKGEPRSGVKGLGSKMGEGSRDLKVTGSGGPEGPQPRRSPGLPETKRRGR
AQRMNKEAEELESGLQRLQDDAKLQPPLGQGSRRTAASPRWASRTCAVLCAAVPQLPHLR
SGCISASSEPSASPVCLHSRPPGHHAHRDKMDGYCMFNHLAIGARYARQKLGVERVLIVD
WDVHHGQGTQFLFEEDPSVLYFSVHRYEQGRFWPHLPASDSPAVGQGRGEGFNINVPWNA
VGMRDGDYLAAFLHVLLPVAFEFQPQLVLVAAGFDSVLGDPKGEMAASAACFAHLTHLLM
ALAGGKVLLSLEGGYNLSSLAEGVCAALRTLLGDPCPRLEPPVAPCRSALSSVSRTLAIH
EKYWRSLRRGAQGIGSDLLPPPPPTRPTPPPEDVEEEPAPTTPPDPREVTRPLPAARTGL
VYDERMTEHYNMWDRYSPDSWLSPALGGEWGLVVRAGGAGSPDSWVLCLPCSLAYVQTVK
ATAGMKPRELHRQGDQYNSIYICASSYECARLAAGSAFNAVRAVLEGEVQNAVAIVRPPG
HHAESDTACGFCFFNSVALAARFAQRLAGRPMKVMILDWDVHHGNGTQHMFEEDPSVLYV
SLHRYDHGTFFPTSEDADADQVGKGPGRGFTLNVPWNGPRMGDAEYLAAFHRLVLPVAYQ
FAPELVLVSAGFDAARGDPLGGYLVSPEGYAHMTHLLLGLAGGRVVLVLEGGYNLVSISE
SMTMCTRTLLGDPLPELGRLQAPHPSALHSLARASAEHRRYWACLRLDVPIREDSRPRSG
QPGPIREDSPPEDPSGGSESPPASEGSDNDILRLGAQLSPDSALLGGASPGGEEPPASEV
SEDPPSLLDEAAALLPSPSISLGVEFADTGTLYAVTPLPWCPHLDSLQPLPPAGLDVLAP
CEECGSQAENWVCLDCYRVLCGRYVNQHMLAHGSVSGHPLVLSYADLSVWCYTCQSYVHH
PTLLPAKALAHRMKFGEDPATGL
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaccagctcctccaaggggacgaggtcaaaggagaaccgaggtcgggggtgaaa
ggtctcgggagcaagatgggggaggggtcaagagacttaaaggtcacaggaagcgggggg
ccggagggcccccagccccgtcgcagccccgggctccccgaaaccaaacgccgcggccga
gcccagaggatgaacaaagaggcagaggagctggaatcggggctgcagcgcctgcaggac
gacgccaagctgcagccacctctggggcagggcagccggagaacagctgcatctccgcgc
tgggcgagccgtacctgtgcggtgttatgtgcggctgttccccagctgccccacctcaga
agtggctgcatctcagcatcaagcgagccttccgctagccctgtttgtctccattccagg
ccgccaggacaccacgcccaccgagataagatggatggttactgcatgttcaaccacctg
gccatcggggccagatacgcccggcaaaaactgggagtggaacgagtcctgatcgtcgac
tgggacgttcaccatgggcagggcacccagttcctcttcgaggaggatcccagcgttctc
tatttctccgtccatcgctacgagcaggggaggttctggccccaccttccggcttccgac
agccccgccgtggggcagggccgcggagagggattcaacattaacgtgccgtggaacgcg
gtgggaatgagggacggggattatctcgctgcctttttacacgtcttactgccagtggcc
tttgagttccaaccccagctggttctggtggccgccgggttcgactctgtgctcggggac
cccaagggcgagatggctgcgtcggccgcgtgcttcgctcacctgactcatctgctcatg
gccctggcgggaggcaaggtgctgctgtctttggagggtggctacaatctgagctccctg
gccgagggggtctgtgcggccctgaggaccctcctgggggacccctgtccccggctggag
ccgcctgttgccccctgtcgcagcgctctgagctccgtgtccaggacgctcgcgatccac
gagaaatactggcggagcctgcggagaggggctcaggggattggctctgatctcctccct
ccccccccccccacgaggccgacaccccccccagaagatgtggaagaggagccagccccc
acgacccccccagacccccgtgaggtgacgcgacccctcccggctgcccgcactggcctg
gtgtatgacgaacgcatgacggagcattacaacatgtgggacaggtacagcccggattcc
tggctctccccggctctgggaggggagtgggggctggtggttagagcagggggggctggg
agcccggactcctgggttctctgcctgccttgcagcctggcgtacgtgcagacggtgaag
gccacagctggcatgaagccgcgggagctgcaccgccagggggaccagtacaactccatc
tacatctgcgccagctcctacgagtgcgcccggctggcagccggctctgccttcaacgcc
gtgcgagccgtgctggagggcgaggtgcagaacgccgtggccattgtccggccccccggg
catcacgccgagtccgacacagcctgtggcttctgcttcttcaattcggttgccctggca
gctcggttcgcgcagcgcctggcgggacggcccatgaaggtgatgatcctggactgggat
gttcaccatggcaacggtacccagcacatgtttgaggaagatccgagcgtgctgtacgtc
tctctgcaccgttacgaccacggcaccttcttccccacctctgaggacgctgacgccgac
caggtggggaaggggccgggccgtggcttcaccctcaacgtgccctggaacggcccccgc
atgggcgacgccgagtacctggccgccttccaccgcctggtgctgcccgtcgcctaccag
ttcgctccagagctggttctggtgtcggctgggtttgacgccgcccgtggggacccgctg
gggggctacctggtgagccccgagggctacgcccacatgacccacctcctgctggggctg
gcaggaggccgggtcgtgctggtactggagggaggctacaacttggtgtcgatctccgag
tccatgaccatgtgcacccggaccctgctgggggacccgctgcccgagctggggcgcctg
caagcgccacaccccagcgccctgcactcgctggcccgggcgagcgccgagcaccgcaga
tactgggcctgcctgcgactggacgtgccgatccgggaggactcaaggccccgatccggg
cagccgggccccatccgggaggactccccaccagaggatccctcaggggggtccgagagc
ccccccgcctctgagggctccgacaatgacatcctgaggctgggagcccagctgagccct
gactccgccctgctgggcggggcttcccctggaggggaggagcctccagcttcagaggtg
tcagaggaccccccgagcctcctggacgaagcagctgccctgcttccctccccctccatc
agcctgggggtggagttcgcagacacggggacgctctacgccgtgacccctctgccttgg
tgtccccacctggactcgctccagccccttcccccggccgggctggacgtgctggcgccg
tgtgaggagtgcggcagccaggccgagaactgggtctgcctggactgttaccgggtgctc
tgcgggcgttacgtcaatcagcacatgctggctcacggctcggtttccggccaccccctg
gtgctgagttacgccgacctgtcggtctggtgctacacctgtcaatcatacgtccatcac
ccgaccctgctgccagccaaggccctggctcaccgcatgaagttcggggaggacccggcc
actgggctctga
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integrated database retrieval system
