Chrysemys picta (western painted turtle): 101932995
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Entry
101932995 CDS
T04662
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101932995 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpic03021
]
101932995 (SMARCA4)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101932995 (SMARCA4)
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101932995 (SMARCA4)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101932995 (SMARCA4)
Chromatin remodeling factors
BAF complex
101932995 (SMARCA4)
PBAF complex
101932995 (SMARCA4)
GBAF(ncBAF) complex
101932995 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
101932995
NCBI-ProteinID:
XP_008173643
LinkDB
All DBs
Position
Unknown
AA seq
1646 aa
AA seq
DB search
MSTPDPPMAGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHAIPPQG
SGGYAQDNMHQMHKPMDSMHEKGISDDPRYGQMKGMGMRPGGHTGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSGSQMSSGPGGVPLDGTDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGPVQGAGPGPGP
GPTPPNYNRPHGIGGPNMPPPGPSGVPPGMPGQPPGAPPKPWPEGPMANAAAPTSTPQKL
IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLD
PVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVV
CMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQH
AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLI
DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD
GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLDTWLEMNPGYEVAPRSDSEESGS
EEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA
LARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGL
GKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRA
FVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA
PRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETIL
IIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSE
KDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFE
LLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN
EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLR
LCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDENRYST
GSGSGSASFPHTASTLCLNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDR
RREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSL
TEKQWLKVYMAIEEGTLEEIEEEVRQKKSSRKRKRDVDVGSATPTTSTRSRDKDDDSKKQ
KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
RQKIEKEEDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGRRRTSRGSR
AKPVVSDDDSEEEQEEDRSGSGTEDD
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagatcctccaatggcaggaactcctcgcccagggccttctcctggaccc
ggcccatcacctggtgcaatgttgggccccagtcctggaccctcgcctggctctgcacat
agtatgatgggacccagccctggaccaccttcagcaggacacgctatcccacctcagggg
tctgggggctatgctcaggacaatatgcatcagatgcacaagccaatggattccatgcat
gagaagggaatatctgatgaccctcggtacggccagatgaaggggatgggaatgaggcca
ggtgggcacacaggaatgggtcctcctccaagcccaatggatcagcattctcaaggttac
ccttctccgctcggtggttctgagcatgcctcaagcccagttccagctaatggtccatcc
tctggctcgcaaatgtcctccggtcctggcggagtcccgttggacggtactgacccacag
gcattaggacaacagaaccggggcccaaccccttttaaccagaaccagctgcaccagtta
agagctcagatcatggcctataagatgcttgccagagggcagcctttacctgaccatctt
cagatggcagtgcagggaaagagaccaatgcctggaatgcagcagcaaatgccgacgcta
cctccaccctctgtatctgggacagggccagtacaaggagcagggcctgggcctggacca
ggaccaacacctccaaattacaacagacctcatggtataggagggcctaacatgccgcct
cctggaccctcaggagttcccccaggaatgcctgggcagccccctggtgcacccccaaag
ccctggcctgaaggaccaatggcaaatgctgcagcccccactagcacacctcagaaactg
attcctcctcagccaactggccgtccttcaccagcacccccggcggtacctcctgcagca
tctcctgtaatgccaccccaaactcagtcacccgggcagccagcccagcctgcccccatg
gtgcagctccatcagaagcagaatcgtatcacgccgatccagaagccaagaggacttgac
ccagtggaaatccttcaggagagggaatacagattgcaggctcgcattgctcacagaatt
caagagctagaaaacctgcctgggtccctggctggtgacctgagaaccaaagctaccatt
gaactgaaagcactaagactgcttaacttccagagacagctgcgtcaggaagtcgtggtg
tgcatgagacgagacactgccctggaaacggcgctgaatgccaaggcatacaaacgcagc
aagcggcagtccctgcgcgaggctcgcatcacggagaaactggagaaacaacagaagatc
gagcaagaacggaaacgcagacaaaagcaccaggaatacctcaatagcattctccagcat
gccaaggatttcaaagaataccatcgatccgtcacgggcaaaattcaaaagcttacaaaa
gctgtggccacttaccatgctaacactgagcgtgagcagaagaaagagaatgagaggatc
gagaaagagcgaatgcgcaggttgatggctgaggatgaagaagggtatcgtaagcttatc
gatcagaagaaagataagcgcttggcatatctactccagcagacagacgagtatgtggcc
aacctgaccgagctggtgcgacaacacaaggccgcacaggtggcaaaggagaaaaagaag
aaaaagaaaaagaagaaggcagagaatgcagaagggcaaactcctgcaattggaccagat
ggcgaacctctggatgagaccagccaaatgagtgatctccctgtgaaagtgatccatgtg
gaaagcggtaaaatccttactggcacagatgctccaaaggctggacagctggacacgtgg
ttggaaatgaacccaggatatgaagtagctcccagatctgacagtgaagaaagtgggtca
gaggaggaggaagaggaggaggaagaggagcagccgcaacctgcccagcctgccctgcct
gtggaggaaaagaagaagatcccagatccagacagtgacgatgtgtcagaagtcgacgcc
aggcacattattgaaaatgctaagcaagatgttgatgatgagtatggggtctcccaagct
ctggcgaggggattacaatcttactacgctgtggcccacgcggtcactgaacgagtggac
aaacagtccacgctcatggtcaatggcgtcctcaaacaataccagattaaaggcttggag
tggctcgtctctttgtacaataataacctgaatggtatcctggcggatgagatgggtctg
ggcaaaacgatccagaccatcgctttaatcacatacctcatggagcacaagcgtatcaat
ggacccttcctcattattgtacctctctcaacgttgtcaaactgggcatatgaatttgat
aaatgggctccttctgtggtgaaggtctcatacaagggctctccagcagcaagacgggca
tttgtacctcagcttcgaagtgggaaatttaatgtcttgctcacaacctacgagtacatc
atcaaagataagcacattcttgccaagattcgctggaagtacatgattgttgatgaaggt
cacagaatgaagaatcaccactgtaagctaacccaagtcctcaacacacactacgtagca
ccgcgtcgtttgctgctgacaggaactccactacagaataagctgccagagctgtgggct
ctactcaatttcctccttcctaccatcttcaagagctgtagcacatttgagcagtggttt
aatgctccctttgccatgaccggagagaaggtggatttgaatgaagaagaaactattctg
attatccgtcgtttgcacaaagtgctgcgtcccttcctgctcagacggttaaagaaggag
gtagaagcacaactgcctgaaaaggtggagtatgtgatcaagtgtgacatgtcagcatta
cagagggtgctgtatagacacatgcaggccaagggcgtgctgctcaccgatggctcggag
aaggataaaaagggcaaaggtggtacaaaaaccctgatgaacaccatcatgcagctgagg
aagatctgtaaccatccgtacatgtttcagcacatagaggaatccttttcagagcactta
ggtttcactggaggtattgtacagggactagacctgtaccgagcatctggcaaattcgag
ctcctggaccggattcttcccaaactacgagccaccaaccacaaggtgctgctgttctgc
cagatgacctcgctcatgaccatcatggaagactactttgcataccgcggcttcaaatac
ctccggctggatggaaccactaaagctgaagaccgcggcatgctgctgaagaccttcaac
gagcccggctctgaatatttcattttcctgctgagcactcgagccggagggctgggactg
aacttacagtctgcagatactgtgattatttttgacagtgactggaatccgcaccaggat
ttgcaggcccaggaccgagcgcatcgtattgggcagcagaacgaggtgcgtgtgctccgc
ctctgcaccgtgaacagcgtggaggagaagatcctggctgcagccaagtacaagctaaac
gttgatcagaaggtcatccaggccggcatgttcgaccagaaatcctccagccacgagcgg
agggctttcctccaggctatcctagagcacgaggagcaggatgagaacagatacagcacg
ggcagcggcagtggcagtgcaagtttcccccacactgcctcaaccctgtgcctgaaccct
gacttggaggagccacctctaaaggaagaagatgaagttcccgacgatgaaacggtcaac
cagatgattgcccgtcatgaagaggaatttgacctttttatgcgcatggacctggaccgc
aggcgggaggaagcacgcaatccaaagcgaaagccacgtctaatggaagaggacgagctg
ccatcctggattattaaggatgatgctgaggtggagaggctcacatgtgaggaggaggag
gagaagatgtttgggcgagggtcacgtcaccgtaaggaggtggactacagtgactcgctt
accgagaaacagtggctcaaggtatacatggctatagaggagggcacgctggaggagatc
gaggaggaggttcgtcagaagaaatcttcccgcaaacgcaagcgagatgttgacgttggc
tctgccaccccgactaccagcacccgcagccgggacaaagacgatgatagcaaaaagcag
aaaaagcgcggcaggcctcccgccgaaaagctctccccaaacccccccaacctcaccaaa
aaaatgaagaagatcgtggatgctgtgattaaatacaaggacagtagtagtggacgccag
cttagcgaagtcttcatccagctgccttctcgcaaagagctcccggagtactacgagctc
atccgcaagccagtggatttcaaaaaaataaaggaacgcatccgcaaccacaagtaccgc
agcctgaatgacctggagaaggacgtcatgctgctgtgtcagaacgcacaaacctttaat
ctggaaggctctctgatctacgaagactcgatagtgctgcaatccgtcttcaccagcgtg
aggcagaaaattgagaaagaggaagacagtgaaggtgaggagagtgaggaggaggaggaa
ggagaagaggaaggatctgaatccgagtctcgctccgtcaaggtgaagatcaaactgggc
agaaaggagaaagcacaagaccggctgaagggtcgcaggcgaaccagccgcggctcccgg
gccaagccagtggttagtgacgacgatagcgaagaggagcaggaagaggatcgctcagga
agtggcactgaagatgattaa
DBGET
integrated database retrieval system
