Chrysemys picta (western painted turtle): 101933805
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Entry
101933805 CDS
T04662
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X2
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpic03036
]
101933805 (CHD5)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101933805 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
HMG_box
AAA_22
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
101933805
NCBI-ProteinID:
XP_005298480
UniProt:
A0A8C3I2D9
LinkDB
All DBs
Position
18:6102851..6161421
Genome browser
AA seq
1821 aa
AA seq
DB search
MEEWGLDDVDYMFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSA
NNPFKGSSAAAAAAAVAAAVETVTIAPQLSASPQQSALPMAIRKAKTKEGKGPGVRKKIK
GSKDGKKKGKGKKMAGLKFRFGGIANKRKKGSSSEEEEREESDFDSASINSSSVRSECSA
GLGKRGKRRRKKKRIDEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKA
PEGKWSCPHCEKEGIQWEPKEEEEEEEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSY
HLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWVWREPPAPFLSGLRPPDLELSVP
PPKPLEGIPEREFFVKWAGLSFWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGS
GDEDGKSEKRKNKDPQYVKMEEKYYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLP
YDQCTWEIDDIDIPYYENLKQIYWNHRELMLGDDIQPPKRLNKKGRKLKEEKLEKPPETP
IVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVF
LYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRAVIRENEFSFE
DNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSK
FFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIK
KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGN
QVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRD
GGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLL
STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERI
TQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRITMP
DPMTPFPEAPSSKGGAVTPSMKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDAT
DDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQE
DLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGR
RQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLV
RDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKK
VQEFEHVNGKYSTPDLIPEGPEGKKSSEVVSSDPNTPVPASPAHMQTGPAAQPDKTEIQL
GFQEEKEQMEPKPKKPAESQGPASAEKAENEENQESSGNEEKPREEKQEESEKVEPSPER
LPVRDEAIQEKEKPLEKSELNACQGKGEDKEYKPEDTKVDEKEQSETQQNGEKEEEEDGK
KEDKNMNFRFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGY
ARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLN
MSQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKA
DVTRLPSMLSRIPPVAARLQMSERSILSRLTNRGGDPTVQQGSFGSSQLYNNNFGPNFRG
PGPGGIVNYSQMPLGPYVTDI
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatggggcctggacgatgtggattatatgttctcagaagaagattaccatact
ctgactaattacaaggctttcagtcagtttctcaggcctctcattgccaagaagaacccc
aaaatccccatgtccaagatgatgacggtgcttggtgccaaatggcgagagttcagtgcc
aacaacccgttcaaaggcagctcggctgcggcggcagcggctgcagtggctgcagccgtg
gaaacagtcaccattgcaccccagctttctgccagccctcagcagtctgctctgcccatg
gccatcaggaaagcgaaaaccaaggagggcaaaggtccgggagtgcggaagaaaatcaag
ggctccaaagatgggaagaaaaaggggaaggggaaaaagatggcgggcctgaaattccgg
tttggaggaatcgccaacaaaaggaaaaaaggctcctcaagtgaagaggaggagcgggag
gagtcggactttgacagcgccagcatcaacagctcttcggtgcgctccgaatgctcggcg
ggcttgggaaagagagggaagaggaggagaaagaaaaagaggattgacgaaggggatgga
tatgagaccgaccaccaggattactgcgaagtctgccagcagggaggggagattatcctg
tgcgacacttgtcctcgcgcctatcacctcgtctgcctagatcctgagctggagaaagcg
ccggagggcaagtggagctgccctcactgtgagaaggaagggatccagtgggagccgaag
gaagaggaggaggaggaggaggaaggaggcgaagaggaggaggatgatcacatggagttt
tgccgtgtgtgtaaggatggcggggagctgctgtgctgtgacacctgcccatcttcctac
cacctgcattgtctgaacccgcctctgccggaaatcccaaacggtgaatggctctgcccg
cgctgtacatgccctcccttaaaaggcaaagtccaacgcatcctgcactgggtctggaga
gagcctcctgcccccttcctgtctgggctccgtccgcctgacctggagctgtctgtccct
ccaccaaagcccctggaggggatcccggagcgggagttctttgtgaagtgggcaggactc
tccttctggcactgctcctgggtcaaagagctgcagctggagctctaccacaccgtgatg
taccgcaactaccaaagaaagaacgacatggacgagcccccggcctttgactacggctcc
ggggacgaggacggcaaaagcgagaagcggaagaacaaagacccgcagtacgtcaagatg
gaggagaagtactatcgctacggcatcaaacccgagtggatgatgattcaccgaatcctg
aatcacagctttgataaaaagggagatgtccattacctgatcaagtggaaagatttaccc
tacgaccagtgtacctgggagattgatgacatagacatcccctactatgaaaacctgaaa
cagatttactggaatcacagggagctgatgctgggggatgatatccaaccgccaaagagg
ctgaacaagaaagggagaaaactgaaggaagaaaaactagaaaaacctccagaaactcct
attgttgatcctacagttaaatttgacaagcagccatggtacattgatgcaacaggcggc
accttacatccttaccagctggagggactgaactggctgaggttttcctgggcccaggga
accgatacgatccttgctgatgagatggggcttgggaagacggtgcagaccatcgtgttc
ctgtactccctgtacaaagagggccactcgaaagggccgtatctggttagtgcccctctc
tccactattatcaactgggagcgagaatttgagatgtgggcacctgacttctatgtggtg
acctacacgggggataaggaaagccgggctgtgatccgagaaaatgagttctcctttgaa
gacaatgccatccggagcgggaagaaagttttccgaatgaaaaaagaagcccagattaaa
ttccacgtcctgctcacatcctatgagctgatcactattgatcaggctgttttaggctct
atagagtgggcgtgtctggtggtggatgaagctcacaggctgaagaacaaccaatccaaa
ttctttagggtattaaatagctacaagattgactacaagctgctgctgaccggaacgccg
ctccagaacaacttagaggagctctttcacctgctcaatttcctgaccccggagaggttt
aacaacctggaaggattcctggaagagtttgctgacatctccaaggaggaccagataaaa
aaactccatgatctgttgggtccccatatgctccggcgattgaaggcagacgtgttcaag
aacatgcctgcgaaaacggagctgattgtgagagtggagctcagccagatgcagaagaag
tattacaagttcatcttgacgaggaattttgaagccctgaattccaaaggtggtgggaac
caggtatcgctgctcaatatcatgatggatttgaagaagtgctgtaatcacccgtacctc
ttccctgtggctgctgtggaggcgccggttttgccaaatggatcctatgatgggaattct
ttggttaaatcttctgggaaactgatgctgctgcaaaagatgctgaagaagctgcgagat
gggggacacagggtcctgatcttctcccagatgacgaaaatgctggatttgctggaggat
ttcctggagtatgagggttacaagtacgagcggatcgatggagggatcacgggaggcctg
cgccaggaagccatcgacaggtttaatgctcctggcgctcagcagttctgttttcttctc
tctacccgagctgggggtctgggcataaaccttgcaacggccgacaccgtcattatttat
gattctgattggaatccccacaatgacatccaggcattcagcagagctcaccgcatcgga
cagaacaagaaggtgatgatctaccgctttgtgacgagagcctccgtggaggagcgcatc
acccaagtggccaagaggaagatgatgctgacccacttggtcgtccgtccagggctgggc
tccaagtcgggctccatgaccaagcaagagctggacgacattctgaagtttgggacggag
gagctcttcaaagacgatgtggaaggcatgatgtcgcagggccagcggatcaccatgcct
gaccctatgaccccctttcccgaagcaccgtcctccaaagggggcgccgtgactcccagc
atgaaaaagaaacatggcagcaccccgccaggggacaataaggacgtggaggacagcagt
gtgatccactacgacgacgctgccatctccaagcttctagatcggaaccaggacgccacg
gatgacacggagctgcagaacatgaacgagtatctcagctcctttaaagtggcccagtat
gtggtgcgagaagaggacggtgtggaggaggttgagcgagagatcatcaaacaggaggag
aacgtggaccccgactactgggagaagttgctcaggcaccattatgagcagcagcaggaa
gatctggccaggaaccttggcaaagggaagaggatccgcaaacaggtcaattacaatgat
gcctcgcaagaggaccaagagtggcaggacgagctctccgataaccagtccgaatactcc
atcggctccgaggacgaagatgaagactttgaagaaagacccgaaggtcagagtggcagg
agacagtcacggaggcaactgaagagcgaccgagacaagcctctgccccctctgctggca
agagttggggggaacattgaggtgctcggattcaatgcccggcagcgcaaggccttcctg
aacgctatcatgcggtggggcatgccgccccaggacgcgttcaactctcactggctggtc
cgagaccttcgtgggaaaagcgagaaagagtttagggcttatgtctctctgtttatgaga
catttatgtgagcctggagccgatggggctgaaacctttgcggacggcgttccccgcgaa
gggctgtcgcgccagcacgtgctgacgaggataggagttatgtcactagtaaggaagaag
gttcaggagtttgagcatgtcaatgggaagtacagcacccctgatctgatcccggagggg
ccggagggcaagaaatccagcgaggttgtctcttctgatccaaacacccctgtcccagcc
agcccagcacatatgcagactgggccagcggcacagccagacaaaacagaaatacagttg
gggttccaagaggaaaaggaacaaatggagccaaagcccaagaagccagctgagagccag
ggtccagcaagtgcagagaaagccgagaatgaagaaaaccaagagagctccggaaacgag
gagaaacccagagaagagaaacaagaagagagcgaaaaggtggagccttcgcctgagcgg
ctgccggtgagagatgaggcaattcaggaaaaagaaaagccattggaaaagtcagaatta
aatgcctgccaaggtaaaggggaagataaagagtacaagccagaggataccaaggtggac
gagaaggagcagagtgagactcagcaaaatggtgaaaaagaggaagaggaggatgggaag
aaggaggataaaaatatgaactttagattcatgttcaacattgctgatggtggctttaca
gagttgcacacgttgtggcagaacgaggagagagctgccgtctcctcaggcaagatctat
gacatctggcaccggagacatgactactggctgctggcgggaatcgttacccacggctat
gcccgctggcaggacatccagaacgacccgcgctatgtgattctgaatgagccgttcaag
tcggagatacacaaggggaactacctcgagatgaagaacaagttcctcgcccgacggttc
aagttgctggagcaggccctggtgatagaggagcagttgcgaagggccgcgtacctcaac
atgagccaggaccccagtcacccggccatggcactgaatgcccgtctggctgaagtggag
tgccttgccgaaagccaccagcatctctccaaagagtccctggctgggaacaagcctgcc
aatgctgtcctgcacaaagttctgaaccagcttgaggaactgctgagtgacatgaaggca
gatgtgacccgcttgccctccatgctgtccaggataccaccagtcgccgctcgtctgcag
atgtctgaacggagcatactgagtcgtctcactaaccgaggaggggaccccacagtccag
cagggctcctttgggtcctcccagctctacaacaacaactttgggccaaacttccgaggt
cctggaccaggtgggattgtcaactacagtcagatgccgctgggaccgtacgtgaccgat
atttag
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