Chrysemys picta (western painted turtle): 101934900
Help
Entry
101934900 CDS
T04662
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X4
KO
K16478
nephrocystin-4
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpic03037
]
101934900 (NPHP4)
Cilium and associated proteins [BR:
cpic03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
101934900 (NPHP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101934900
NCBI-ProteinID:
XP_005298483
LinkDB
All DBs
Position
18:6286991..6396467
Genome browser
AA seq
1455 aa
AA seq
DB search
MPRGRGDLLSSKMSEWQKIFVQNLTVPPHSQRKRHLPRESIAFQCVLKYVEGNLIKQRVL
EGLSEVEYQLRLSLFDITYRHFFGRTWKSTTRPLKAVPGQPPKVVFNETIYFHTSLSHPS
IVAVVEVVAATKKREGTHQDLSCGFGILHLFNSKSEPTDVATKDRGLQLYHGTPRALLHP
LLQDPIEQNKYMTVIENTHLQYTLRPHPPLETVYHLFPENMLVSGLQKIPGLLLTHGETS
DFFRKPHLMKSVTWYLDKLSINLYPSLEKFEEELLDLLNSERLLKDSSTVDGSEVLIQER
RLHIGVHNGLCFVQTPQVVVLVPEAEVARGRSASFHRKQGLSAKPSTVGQALVLRSRIRL
TEMVRHPAFAIVFQLEYVFSAPSGADRKALSISSLTKAAYMHSIRWTVWNPLLDSSSTEV
ILPLQGGAQQNPSHVLVYKMPPTSMSSEEVKQVESGTVQFQFSTNSEEHLGTSADSLSNS
RAELLHSAKPSTPSLSAPSSPQMLVSTQDYPQGPGLSISQLSASPRSPPVSHSSKPPLKR
QTGSPVPCSPGMRRREHAQELPHGGSRGGITHLEADLNPSSLILDSSASDQLQELPFTPV
HAPIVAMGTQTGSSSSVLTRASLSRLHAAGFPEILDCNKEPAEVVDPADPVNFNPQREEA
DFLQSNEIILQFLAFTRIPQDGLGTTWPKTMYFTFQFYRFPPVTTPRLQLVKMDQSGTAS
SAVSSHMLFQINKDGTLRSESPGLQLKYMVDPGFLKPGEQRWFIRYIADHNLQIDIWDGD
SLLLIGSAAVKLKHLLRQGRRAVQVHHELEVMTTEYEQDTTVMSGDVLRHGTVKPIGVYA
VVKGRLHLSLANVGHLCEQRLKKSNSLPPSRSRIVSSHDGTSNFHGGSLFSLNTPGAKNV
SQAQKLADVDSELAAMLFSRLQEVSTAFQHVSREASAIRRRKLERMMMVRQLEAQEDVSG
RRASRMGRREERIQHSRDLEIIDAYRERIKAESISSMLIQAITTNYTLYATLGTAEFFEF
ALRNPYNVQHTVTIEIDHPELSVIVDSREWRHFKELTQTMTTPVEEDMFHLQDNLMPQVY
LRPKETIHIPFKYQTFSVDHAVMMQQGPAELRFNKGTEAAPPWKSSAMLTKRIKISFKAN
GDKPIAILSVNVEPQPHVVDQTFRFYHPELTFLKKSIRLPPWYTLPGAPAGMPGGEPEMY
VRCSDPNIICETKKMGPGEPQDVFLKVAGGPSPQIKTFFVAIYTDAWLAAPIQIWQFYLH
SLQRVDVSCITGQQTRLSLVLRGTQTIRKVRAYTSHTQELKVDPKGVFILPPNGVQDLHI
GVRPQKAGSRFVYLNLVDVEYHQLVSSWLVCVSCRQPVISKAFEITLPAGGGKGSNKRIT
YTNPYPSRRMYFLHTNRADLLQFKEDSFEIGGGEMYTIGLRFAPSQSTGEEEILIYINDH
EDKNEETFCVKVAYQ
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgcctagaggaagaggtgaccttctaagcagcaagatgagtgaatggcaaaagattttt
gtgcaaaatctgactgttcctccacactcccaaaggaaacgacatctcccgagggaatca
atagcatttcagtgtgtcctgaagtatgttgaggggaatttaattaagcagagagtgcta
gaaggcttgtcagaggttgaataccagctccgcctgtccctctttgacatcacgtatcgt
catttctttgggagaacatggaaaagtaccacaagacctctcaaagctgtgccaggacag
ccacccaaagtggttttcaatgagaccatttattttcacacatctttaagccatcccagc
atcgtcgccgtggtggaagtggtggctgcaaccaagaagcgagaggggacccaccaggat
ctgtcttgtgggtttggaattctgcacctgttcaacagcaagtcagagccaacagatgtg
gccaccaaggacagagggctccagctgtatcacgggacaccgcgagcgctcctgcacccc
ctcctgcaggacccgatagaacagaataaatacatgacggtgatagagaacactcacctt
cagtacaccttaaggccacacccgcccctcgagaccgtgtatcacctcttccctgagaat
atgctggtgtctgggctgcagaaaattcctggcttgctgctaacacatggagaaacaagt
gatttctttcgaaaaccccacctcatgaaatcagtcacgtggtacttggacaaactttcc
attaatttgtacccttcattagaaaaatttgaggaagagctgctggatttactcaacagt
gagcgtttacttaaggatagctccacggtggatgggagcgaagttctcattcaggaacga
cggctgcacatcggggtccacaatggcttatgcttcgttcagacgcctcaggtggtggtg
ttggtgccagaggccgaggtggcacgggggcgctcggccagcttccacaggaaacaaggc
ctcagcgccaaaccaagcacggtaggtcaagctctggttttgagaagccgcattcgtttg
accgagatggtccgtcacccagcgttcgcaattgtcttccagctggagtatgtcttctct
gcaccaagtggagctgacaggaaggcattgtccatttcctctttgactaaagcagcctat
atgcattccatccgatggactgtttggaatcctttgctggactcgagttccacggaagtg
atcttaccacttcaaggaggcgcccagcagaaccccagccatgtgttagtttacaagatg
ccgcccaccagtatgagctccgaagaggtgaagcaggttgagtctggcacggtccagttc
cagttttccaccaattcagaggaacatctcgggacttctgcagattccttaagtaacagc
agagcagagctcctccactcagcgaagccgtccacaccatctctgagtgcaccatcttcc
ccccagatgttggtttccactcaagactatcctcaaggacctgggttgtcgatatcccag
ttgtctgcatcaccccgttctcctcctgtaagccactcgtccaaacccccgttgaaacgg
caaactggctctccagtcccctgctcccctgggatgcgccgacgtgaacatgcacaggag
ctcccacatggaggcagccgcggtggcataacgcacttggaggctgacctcaaccccagc
tccttgatcctggattcctctgcaagcgaccagctgcaggagctgccattcacgcccgtg
cacgcgcctattgttgccatgggaacacagactggaagctctagctctgtcctcactcgg
gcctctctgtctcgcttgcatgccgctggctttccagaaatcctggactgtaacaaggag
ccagcagaagttgtggaccctgcagaccctgtgaacttcaaccctcaaagggaagaagct
gacttcttgcaaagcaatgagatcattttgcagttccttgccttcaccaggattccacag
gatggcctggggacaacgtggcccaagactatgtatttcaccttccagttttaccgtttc
ccaccagtcacaacaccacgactgcagctggtgaagatggaccagtctgggacagccagt
tcagctgtatcttcccatatgttattccagatcaacaaagatggaacccttaggagtgaa
tctccagggttgcagctgaagtatatggtggatcctggttttctgaagccaggagaacaa
cgctggtttatacgttatatagctgaccataacctacagattgatatttgggatggagat
tctttgctcctcattggatctgctgcagttaagctgaagcacttgcttcgccagggtcgg
agagcagttcaggtccatcatgagctggaggtgatgacaactgaatacgagcaggacaca
acagtgatgagtggggacgttctcagacatggcactgtgaagcccataggcgtctacgct
gttgtgaaaggccgacttcacctgagtttggccaatgttggtcacctgtgtgagcagagg
ctgaagaaatcaaactccttgccaccctcccgctctcgcattgtctcctcgcatgatggg
accagcaacttccacggaggcagcttgttctccctcaatacgcctggagctaagaacgtc
tcccaagcccagaagctggcggacgtggacagcgagctggctgccatgctgttcagccgc
ctgcaggaagtgagcacggccttccagcacgtcagccgcgaggccagcgccatccgcagg
cggaagctggagaggatgatgatggtgcgacagctcgaagcccaggaggacgtcagtggg
aggagagcaagccgtatgggccggcgtgaggagcgcatccagcattccagggacctggag
attattgatgcctaccgggagcgcatcaaggccgagagcatctctagcatgctgattcag
gccatcaccaccaactacacgctctatgccacactgggcacagcagagttctttgaattt
gccctgagaaacccatacaacgtccagcacacggtgacgatcgagatcgaccaccctgag
ctgagtgttattgtggacagtagggagtggagacacttcaaagagctgacccaaacaatg
actactccagtagaagaggacatgttccatcttcaggacaacctcatgcctcaggtctac
ctgcgccccaaagagaccattcacattccatttaaataccagaccttctctgtggaccac
gctgtcatgatgcagcagggccctgctgagctgagattcaataaaggcacagaagctgca
cccccctggaagtccagtgccatgctgacaaaacgcatcaagatctcctttaaggcaaat
ggtgacaaacccattgcaattctcagtgttaatgtggagcctcagccccacgtggtggat
cagacattccgattctatcacccggagctcaccttcctgaagaagtccatacggttacct
ccatggtacaccctgccaggtgccccagcaggaatgccaggtggggaaccggagatgtac
gtccgctgcagtgaccccaacatcatttgcgaaacaaaaaaaatgggtcctggggagcca
caggatgtgttcttaaaagtagctggaggaccaagcccacagatcaaaacattctttgtt
gctatttacacggacgcctggcttgctgctcccattcagatctggcaattttaccttcac
tcgctgcaacgtgtggacgttagctgcataactggccagcagacccgcctttccttggtt
ctcaggggcacccaaacgatccggaaagtgagagcttacacctcgcatacacaggagctg
aaggtggatcccaaaggcgtgtttattctccctccgaacggggtgcaggacctgcatatc
ggcgtgaggcctcagaaagctggcagcagatttgtttacctcaatctggtggatgtggag
taccaccagcttgtttcgtcctggctggtgtgcgtctcctgccgacagcctgtcatttcc
aaggcatttgaaataacactccctgccggcggagggaaaggctccaacaagcggatcaca
tacacgaacccatatccctccaggaggatgtacttcctgcataccaaccgagctgacctg
ctgcagttcaaggaggattcctttgagattggaggaggggagatgtacacgattggcttg
cggtttgcaccgagccagagcaccggggaggaggagattctgatttatatcaatgatcac
gaagacaagaatgaagaaaccttctgtgtgaaggttgcctatcagtaa
DBGET
integrated database retrieval system
