Chrysemys picta (western painted turtle): 101935308
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Entry
101935308 CDS
T04662
Symbol
CCDC88B
Name
(RefSeq) coiled-coil domain-containing protein 88B isoform X1
KO
K25813
coiled-coil domain-containing protein 88B
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpic04812
]
101935308 (CCDC88B)
Cytoskeleton proteins [BR:
cpic04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
101935308 (CCDC88B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
APG6_N
bHLH_ILI
Motif
Other DBs
NCBI-GeneID:
101935308
NCBI-ProteinID:
XP_042705670
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All DBs
Position
5:10013514..10037601
Genome browser
AA seq
1481 aa
AA seq
DB search
MGVSLLPPTAGLLWVLVSWRPCRPPPPQPLPFAEVPLCAEQKTSGGSLAGRGGGADTPGC
RVPLCGIRTNHRDPSRGWTGTGVSGRAWGISSRVPLSHGRDPTPWRARPPQSQQGDERLR
LQTLHTLLQQLRAFYQDDLQQLILMTPPNVQLLARDPLTEQGINEMRKLLLLLLGAAVQC
ERKAEVIERIQGLDIETQTALAGAIQEVTQDPGVVLSLQWGALAELHPLELTRVLQELSS
RLRGLVQERDASAERLWELQQEREVSSPHGPLSPEGPWDNRQHLGVQLADARGQARRLRQ
ELEEKSEELLDQRQELQELEAELRRLRQEHRAVAGEARLAGLYRDELDAMREKAARAERL
QGELSALKERLPTLERCRGRLEEERAFSQALLDSKAQLEGQLESARARAQHLPQLEKENL
LLRSQLEQVEEERERERQRLEELQQEKVLLEGELRQNLGESQHLSWEEEQEPNEAPNDPA
ETPKSLSYEVTEVTSSRLLALERENQELRRRLQEALEAPGEPRSPGLEQKNKALSKEVQR
LGAELEAQRARSCQEREELSAALLGEKEQLERELRSLQEQRHCEESLQSQGDPGTWAQEQ
QEALAESGRRLCQVEERASSLQEALRRLEATHAKALEGLTASQEARGRLEQELLRLRQEL
EQQRLEALLLGQLEAEAQALEKEREALRAELSQAEQELAEARGSLEAERQRTGRQAEQAR
EAAEELRASERELGTLQRGLEQHKAALTQLEGERGALEAVLSQAERERRALDKETRRLRA
QTQAQEEALAEQGRRAAQLEAQSRLQALELGGLRETAQRLRELEQESKGLREQLAAERKA
SAALREELLSEKVKGQEREADLVRLREQLERREEEQRLLEEQQGTQQSQYQSLEQRLELS
FREMLALKEEKIGALRSQVEELLVLNQHLGKELRQVKSSPGAPLPEAPGAVEQGQGNPEP
ALGLRAEPESDTLSKHLIEVERSNAALLAEKEALMGRLGQLESQLGALQGELLSLQGQSG
GLREESGRLQAQCGALQVEQAALLSQKAALEARASELRERLAGLEAEVRVARQERDEWRG
RHEGLVRNHDKLALLHERQGAELEGLLGKQAGLKGALRALEQEHRELQDRHSHLVAQQAG
LEQREAALRGERERLEGAEREHRQLGEQHARLQDEHARVQVALAAAERAQEEQQGELRGL
RGRLTGLQLEQARLEAEGTALREQNHQLEVALGRIGDQCELLAQLKGNQEEENRHLLQEI
QKLSQENRSLLERSMESREQYHSEQRQHLDKLNELRREKQKLVEKIMDQYRVLEPALPKS
KKSSNWIADKMKKLMKPRREPSREQQRPLAQGANSIENLPGLGQDGRAPDGDSSAPASPV
PLRKASSVLSLPDAQRVHLRLNRRKLSSRVLVSESFGPGDATPRQRFRQRQRPLAFLGGS
REEAAAPWEAQEGQRLPSAGSEEGGLPQGKEKAPLTPQLSQ
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgggagtttccctcctcccacccacagcaggtctgctgtgggtgctggtttcctggcgt
ccctgcaggccccccccaccccagccgctcccgtttgcggaagttcctctttgcgcagag
cagaaaaccagtggggggagcctggctgggcggggggggggagcggacacacctgggtgc
agggtccccctttgtgggatccgcaccaaccacagagacccaagcagaggatggacaggg
acgggcgtgtctgggagagcctgggggatttcgtctcgggtccccttgtcacatggcaga
gacccaaccccgtggcgtgcccggccaccccagagccagcagggcgacgagaggctgcga
ctccagaccctgcacaccctgctgcagcagcttcgcgctttctaccaggatgatttgcag
cagctgattctaatgactccccctaatgtgcagcttctcgccagagaccccctgacagag
cagggcatcaacgagatgcggaagctgctgctgctgctgctgggggctgctgtgcagtgt
gagcggaaggcagaggtcattgaacggatccaggggctggacatcgagacccagactgcg
ctggccggtgccatccaggaggtgacacaggacccgggggtggtgctgagcctgcagtgg
ggggcactggctgaactgcacccactggagctgacacgggtcctgcaggagctgtcctcc
cggctgcggggcctggtgcaggagcgggatgcgagtgcagagaggctgtgggagctgcag
caggagcgggaggtgtcgtccccgcatggcccgctgtcccctgaggggccctgggacaat
cgccagcaccttggggtgcaactggctgacgctcggggccaggcccggcgcctgcgccag
gaactggaggagaaatctgaggagctgctggatcagcgccaggagctgcaggagctggag
gccgagttgaggaggctgcgacaagagcaccgggcggtggcgggcgaggcgcgcctggcg
gggctgtaccgggatgagctggatgccatgcgggagaaggcggcccgggctgagcgcctg
cagggagagctctcggccctgaaggagcgactgcccacgctggagcggtgccggggcagg
ctggaggaggagcgggccttctcccaggccctgctggacagcaaggcccagttggagggg
cagctggaatccgcccgcgcccgggcccagcacctgccccagctcgagaaggagaatctg
ctgctgcggagccaattagagcaagttgaagaggagcgggagcgggagcgtcagcggctg
gaggagctacagcaggagaaggtgttgctggagggggagctgaggcaaaatttgggggag
tcccagcacctatcctgggaagaggagcaggagcccaatgaggctcccaatgaccctgct
gagactcccaagtccctgagctatgaggtgactgaggtgacgtccagccgcctgctagca
ctggagcgggagaaccaggagctgcgccggaggctgcaggaggcactagaggccccggga
gaacccaggagtccaggccttgagcagaagaataaggccctcagcaaagaggtgcagcgg
ctgggggcagagttggaagcccagcgggcccggagctgccaggagcgggaggagctgagc
gctgccctgctgggggagaaggagcagctggagcgggagctgcgcagcttgcaggagcag
cggcactgcgaggagtctctgcagagccagggggacccaggcacctgggcccaggagcag
caggaggcactggcagagagtgggcgccggctgtgccaggtggaggagcgggcgtccagc
ctgcaggaggcattgcgccggctggaggccactcacgccaaggccctggaggggctgacg
gcctcccaggaggcccgggggcgcctggagcaggagctgctgagactgcggcaggagctg
gagcagcagcgtctggaggccctgctgctggggcagctggaggccgaggcccaggcgctg
gagaaggagcgagaggcgctgcgggcggagttgagccaagccgagcaggagctggcggag
gcccggggcagtctggaggcagagcggcagcggactgggcgccaggctgaacaggcgcgg
gaggccgcggaggagttacgggcgtccgagcgcgagctgggcaccctgcagcgcgggctg
gagcaacacaaggcggccctgacccagctggagggcgagcgaggggcgctggaggcggtg
ttgagccaggctgagagagagcgccgggcgctggacaaggagacccggcgtctgcgggcc
cagacccaggcccaagaggaagcactggcagaacagggccgccgggccgcccagctggag
gcccagagccggctgcaggcactggagttgggtgggctgagagagacagcgcagcggctg
cgggaactggagcaggagagcaaggggctgcgggagcagttggcagccgagcgcaaggcc
tcagccgctctgcgggaggagctgctaagcgagaaggtgaagggacaggagcgggaggct
gacctggtgcgactgcgggagcagctggagcggcgggaggaggagcagcgcctcctggag
gagcagcagggcacccagcagagccaataccagagcctggaacagcggctggagttgtct
ttcagagagatgctggctctgaaggaggagaagatcggcgccctccgcagccaggtggag
gaactgctcgtcctcaatcagcacctggggaaagagctgcgccaggtgaagagcagccct
ggggcccccctacccgaagcgccaggggctgtggagcagggccaggggaaccccgagccg
gcgctggggcttcgggctgagccggagagcgacaccctgagcaagcatctcatcgaggtg
gagcgcagcaacgcggcactgctggcagagaaagaggctctgatggggcggctggggcag
ctggagtcgcagctgggcgccctgcagggggagctgctgagcctgcaggggcagagcgga
ggcctgcgggaggagagtgggcgactgcaggcccagtgtggggctctccaggtggagcag
gcggcgttgctttcccagaaggcagcactggaggcccgggcgtcggagctgcgggagcga
ctggcagggctggaggctgaggtgcgggtggcccggcaggagcgggatgagtggcgcggg
cgccacgaagggctggtgcgcaaccatgacaagctggcactgctgcacgagcgccagggt
gctgagctggaggggctgctgggcaagcaggccggcctcaagggggcactgcgggcactg
gagcaggagcaccgagagctccaggacaggcacagccatctggtggcacagcaggccggg
ctggagcagcgggaggcagccctgcggggggagcgggagcggctggagggggctgagcgg
gaacaccggcagctgggggagcagcacgcccggctgcaggacgagcatgcacgggtgcag
gtggcactggctgcggctgagagagcgcaggaggagcagcaaggggagctgcggggcctg
cgaggccggctgacgggactgcagctggagcaggcacggctggaggctgagggcaccgcc
ctgcgggagcagaaccaccagctggaggtggcgctgggccggatcggagaccagtgtgag
ctcctggcccagctgaaggggaaccaggaggaggagaaccgacacctgctgcaggagatc
cagaaactgagccaggagaaccgcagcctgctggagcgcagcatggagagccgggagcag
taccattcggagcagcgccagcacctggataagctgaatgagctgcgccgggagaaacag
aagctggtggagaagataatggaccagtaccgagtgctggagccagcgctgcctaagagc
aagaagagcagcaactggatcgcggacaagatgaagaagctgatgaagccgcggcgtgag
ccctcccgggaacagcagcgccccctggcgcagggggccaatagcattgagaacctgcca
ggacttgggcaggatgggcgcgcacctgatggggactccagtgcccctgcctcgcctgtg
cccctgcgcaaggccagcagcgtgctgagcctgcccgacgcccagcgggtgcacctgcgg
ctaaaccggcgcaagctgagctcccgcgtcctggtcagcgagtccttcgggcctggggac
gccaccccccggcagcgcttccgccagcgccagcgcccccttgccttcctggggggctcc
cgcgaggaggccgctgccccctgggaggcccaggaggggcagagactccccagtgctggc
agcgaggagggagggctaccgcaagggaaggagaaggcaccgctcacgccccagctcagt
cagtga
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integrated database retrieval system
