Chrysemys picta (western painted turtle): 101935780
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Entry
101935780 CDS
T04662
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101935780 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101935780 (EDC4)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101935780 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
101935780 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
NBCH_WD40
Uteroglobin
EIF3I
Motif
Other DBs
NCBI-GeneID:
101935780
NCBI-ProteinID:
XP_042716193
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
MLRTVPLGTLQEKQVICLSGDDSSTCVVISAKDVEIVASSDSSITSKARGSNKVKIQPVA
RYDWEQKYYYGNLIAVSNSYLAYAIRGASNGSAMVRVLSISTAERTLLKGFTGGVADLAF
AHLNSNQLACLDEAGNLFVWGLAMDNGKIQEEILVNIKRPEGTPLNSFRRIIWCPFIPDE
NEESGEEGSQTLALLHEDRAEVWDLDIIRANNSSWPVEVTNIKEGFIVVKGHSTCLSEGA
LSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEV
PFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSKSVPPSLKACLDLSAEFLILS
DVQRKVLYVMELLQNQEEGRAYFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEEES
DSLSTEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMAAPIPPHGSHEDF
AFPDHLADLGAEGLGSEKGSVHGSQPDLRRIADLPVPADFLALSNDAKPKLMTPDAFMTP
STSLQQIAMSPGSSVSSLTAVTAMSSASVTDPAVPRPSEDLTLSPKMQLDTSLTLSSSSS
SLQTSPRNHSVLIPGLPDKLTPKAPVPVTPANPPLTLELQEVEPLVVAQASPTRERSPDV
ISSASTAMSQDIPEIASETLQRSFAAAPAGLPAEVLEPNHHADSMASAASALHLLSPRNR
HSSEHSQHSLDMAPVEVDRLTTPSLLETALTQENASSNSVVSQPWPAAPDITRETRNSIA
DSPRDDIAEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASAQR
LPVKDWKAKVSPRASPKLKRKGKKDDGDVTQSPRSGDRQVTAECQDELMSLLRSQQRELT
ELRQNQMELMQRLTDHLDAVQSSLMGHMERVIDSQQEQEQRRLDRALTEGQQRNGQLQEH
LSQQLSQSLSTAACNRLERTIREEMKKTVPQCISKSLDPVTGQLSNTIAAKLTAVEGTLK
ENVTKLVKSKNLTDAIARAAADALQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINDTFK
QGTQEYIQQLETHMKNKKAREQEARDSLLGQLRQLISTFQSSTEQLASTITTSVHTEVQH
QLHVIVGNMQDSILTQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAHLDFQ
SQQTHVLQLLQQGRLNQAFQQALTAADLNLVLYVCETVDPQQVFGQHPCPLSQPVLLSLI
QQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQAEPHNTLS
KPARRLMIMLQGLVTPSMT
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgctccgaactgttcctctgggaaccctgcaggagaagcaagtcatctgcctttctgga
gatgacagctccacctgcgtggtgatatcagcaaaagacgtggagattgtggccagcagt
gactctagcatcaccagtaaagccagagggagcaacaaggtaaaaatacagccagtagcc
aggtatgactgggagcagaaatactactatggcaacctgatagctgtatcaaactcctac
ctggcgtatgccattagaggtgccagcaatggctcggctatggtgcgggtgctgagcatc
agcactgccgagcggaccttgctgaagggcttcacgggcggcgtggcagacctggctttc
gcccatctcaactccaaccagctggcctgcctggacgaggctggcaacctctttgtctgg
ggcctggccatggacaatgggaaaatccaagaggagatcttggtgaacataaaacgacct
gagggcaccccgctgaacagtttccggagaatcatatggtgccccttcatcccagacgag
aatgaggagagcggtgaagagggcagccaaacattggcattgctgcacgaggacagggca
gaggtttgggatctggatattatccgagccaacaacagttcctggccggtggaggtgact
aacatcaaagagggcttcattgtggtgaaaggccacagcacgtgcctgagcgagggagcg
ctctctccagatgggaccgtcttggccacagcaagccacgatggctatgtcaaattctgg
cagatctacatagaggggcaagatgagcccaggtgcctgcatgaatggaagccccatgac
ggcaggccgctctcctgcctgctcttctgtgataatcacaaaaaacaagacccagaggtt
cctttctggaggtttctcatcactggagcagatcagaaccgagagctgaagatgtggtgc
accgtttcttggacctgtctgcaaactgtccgcttttcccctgacatcttcagttccaag
agtgttccccccagtctgaaagcctgcctggacctctctgccgaattcctgatcctgagc
gacgtgcagagaaaagtcctgtatgtgatggagcttttgcagaaccaggaggagggcaga
gcttacttcagctccatctcggagttcctcctcacccacccggtcctgagcttcggcatc
caggtggtgagccgctgccggctgcggcacacggaggtcctcccagctgaagaggaaagc
gacagcctgagcacagaaggggctcagggggctggagctgtcgaatcggcggcgggtgtg
ctgatcaagctcttctgcgtccacaccaaggccctgcaggatgtgcagatccgattccaa
cctcttcatagtccagatatggctgcaccgatccctccccacggctcccatgaagatttc
gcgtttccagaccacctggctgacctgggcgcagaagggctgggatcggagaaggggtcc
gtccacggctcccaaccggacttacggcgcattgcagacctgcctgtgccagcggatttt
cttgccctctccaacgatgccaaacccaagctgatgaccccagatgcgttcatgacccca
agcacatctcttcagcagattgccatgtcgccgggaagcagcgtcagttccctgactgca
gtcacagccatgagcagcgcttccgtcactgaccccgctgtgcccaggccatctgaggac
ctgactttgagcccaaagatgcagttggacaccagcctgacgctaagcagcagtagcagc
agtctccaaacgagtcctaggaaccattcagtccttatccctggactccctgacaagctg
accccaaaggcccctgtcccggtcactccagcaaacccccctctgactctggagctgcag
gaagtggagccccttgtggtagcccaggcctcacccacccgtgagcgctccccggacgtc
atttcctcggcctccacggccatgtcccaggatatcccagagatcgcctctgagacgctg
cagcgcagctttgccgcagccccggccgggctccctgcagaggtgctggagcccaaccac
catgcggacagcatggcctcggccgcctcggccttgcacttgctgtccccgaggaaccgg
cacagctccgagcacagccagcactccctcgacatggcccccgtggaggtggacaggctg
accacaccctcgttactggagactgctttaactcaggaaaatgcatcttccaacagcgtc
gtgagccagccgtggccagcagcccccgacatcaccagggaaaccaggaacagcatagca
gacagcccaagggatgacattgcagagaagcacaagagctcttcctatcacaggcacagc
taccacctgctgcagcacgacagccaggatgccagtgcagagcaaagtgaccatgatgat
gaagttgcaagtttggcttctacatcaggcgggtttggtgccaaagcatctgcacagagg
ctgcctgtgaaggactggaaagccaaggtgtcccctcgggcttcccccaagctcaaacgg
aagggcaagaaagatgacggggatgtgacccagtccccgaggtcaggtgatcgccaggtg
accgccgagtgccaggatgagctgatgtctctgctgcggagccaacagagggagctcacg
gagctgagacagaaccagatggaactaatgcagagactcactgaccacctggatgctgtg
cagagctccctcatgggtcacatggaacgagtgattgattctcagcaagaacaagagcag
cggaggctggaccgagctctgacagaggggcagcagcggaacgggcagctccaggagcac
ctgtcccagcagctctcgcagtccctctccactgctgcctgcaatcgcctggagaggacc
atccgcgaggagatgaagaagacggtgccccagtgcatttccaagagcctggaccctgtc
actggccagctgagcaatacaattgccgccaagctcacggctgtcgaggggacattgaag
gaaaacgtcaccaagctagtgaaatcaaagaacctgacagatgccattgcgagggcagcg
gcggatgctctgcaggggcccatccagtcggcgtaccgggaggcgttccagagcgttgtg
ttgccggcgtttgagaagagctgccagtccatgttccagcaaatcaacgacactttcaag
caggggacgcaggaatatatccagcagctggagactcacatgaagaacaagaaggcgcga
gagcaggaggcccgagactccttgctgggccagctccggcagctgatcagcaccttccag
agcagcacagagcagctggcctccaccatcaccaccagcgtgcacaccgaagtgcagcat
cagctgcacgtcatcgtgggcaacatgcaggactctattctgacccaggtgcagagggtc
atcaagggagaggtgagcctggccatgaaggagcagcaagcggccgtcacctcgagcatc
gtgcaggccatgcgctccgccgcaggcacgcccatcccctctgctcacctggacttccag
tctcagcagactcacgtcctgcagctgctgcagcagggccgcctcaaccaggctttccag
caggctctcacggcagctgatctgaacctggtcctatacgtctgtgagacggtggatcct
cagcaggtgtttggacagcacccatgtccgctctcccagcccgtcctcctgtctctcatt
cagcagctctcctcggatctgggcacccgcaccgaactgaaactgaactacctggaggag
gccgtgatgcacctggaccacagcgaccccatcacccgagaccacatggggtcagtcatg
aaccaggtgcggcagaagctcttccagttcctgcaggcggagccccacaacaccctgagc
aagccggcccgccgcctcatgatcatgcttcagggcctggtcacccccagcatgacctaa
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integrated database retrieval system
