Chrysemys picta (western painted turtle): 101936408
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Entry
101936408 CDS
T04662
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04120
Ubiquitin mediated proteolysis
cpic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101936408 (SYVN1)
04120 Ubiquitin mediated proteolysis
101936408 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpic04121
]
101936408 (SYVN1)
Enzymes [BR:
cpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101936408 (SYVN1)
Ubiquitin system [BR:
cpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101936408 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-ANAPC11
zf-RING-like
zf-RING_5
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
101936408
NCBI-ProteinID:
XP_005307945
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All DBs
Position
5:complement(7149576..7175318)
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AA seq
630 aa
AA seq
DB search
MFRTAVMMAASLALTSVVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIISLMLLLGVLDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYILHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKRAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVM
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSQTPPEQQEQAQQQQQQPP
PHHTPLIPQPPNFPQGILPPFPPGMFPLWPPIGPFPPVPGVQPPNNAENPSAASSAPSTS
GIQTTASTSRPGGDSASGSDTAPVGAVPGFPFPPPWMGMALPPLFGFPPMPVPPAGFAGL
TDEELRAMEGHDRQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGSPRPTQLPSSLN
TSTSSQETPTRESTTFNSPDSTSSPGTSPAVEPDSTGQTDDPSGLVGAEGYTEPAGHEEE
EEQPLPGEPDTAELRRRRLQKLESSSPPSH
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaacggcagtcatgatggctgccagcctggctctgacatcggtggtagtggct
catgcctattacctgaagcaccagttctacccaacagtggtgtatctgaccaaatccagc
cccagcatggcagttctctacattcaggctttcgttttggttttcctcctgggcaaattc
atggggaaagtgttttttggccagctccgagcagcagaaatggagcacctacttgagaga
tcatggtatgcggtcacagaaacttgcctggccttcaccgtcttcagagatgacttcagt
ccccgctttgtggccctctttaccctcctcctgttcctcaagtgcttccactggcttgct
gaggaccgggtggactttatggagaggagtccaaacatctcctggctctttcatttccgc
ataatctctctgatgctcttgttgggcgtcctggatttcctgtttgtcagccatgcctac
cacagcatcctcacccggggagcctccgtccagctggtctttgggtttgagtatgccatc
ctcatgaccatggtgctcacaatcttcataaagtacattctgcattcagtcgacctgcag
agtgagaatccatgggacaacaaggccgtctacatgctgtacacggagctcttcacaggc
ttcattaaagtgctgctgtacatggccttcatgaccatcatgattaaagtgcacactttc
cctctcttcgccatccggcccatgtacctggcaatgaggcagttcaagagagctgtgact
gatgccatcatgtcacgccgcgccattcgcaacatgaacactctatatcctgatgccact
ccagaagagcttcaggccatggataatgtgtgcattatctgccgggaggagatggtgatg
ggtgctaaacgcctgccatgcaaccacatatttcacaccagctgcctgcgttcctggttc
cagcggcagcagacctgccccacctgccgcatggacgtcctccgtgcctccctccccact
cagtcccaaacgccacccgagcaacaggagcaagcacagcagcagcaacagcagccaccg
ccgcaccatactccactgattccccagccgcctaacttcccccaaggaatcctgcccccg
tttcctcctgggatgttccctctctggcctcccataggtccatttcctccagtgcctggt
gtccaaccacccaacaatgcagagaatccctctgctgcttccagtgcaccctccacttca
ggcattcaaacaacagcaagtacctcgagacctggtggtgattcagcatctggatctgac
actgcccctgtgggagcagtgcctggctttcccttccctcccccgtggatgggaatggca
ttgccacctctatttggcttccctcccatgcctgtgccacccgccgggtttgctgggttg
acagatgaagagctccgtgccatggaaggccatgaccggcagcatctggaagccaggctc
cagtgtctgcagaacatccacacgctcctagatgcagccatgttacagataaaccagtat
ctcaccgttctggcgaccattgggtcaccccgtcctacgcagctgccaagctccctaaac
acttcgacctcctctcaagagacacccaccagagaatccaccactttcaattcacccgac
agtacctcttccccagggacctctccagcagtggaaccagactcaacaggtcaaacagat
gatccatctggattggtgggtgcagagggatacacagagccagccgggcacgaggaagaa
gaggagcagcctttacctggggagcctgacacagctgagcttcgcaggcgccggcttcag
aaactggaatcctcctctcccccttcccattga
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