Chrysemys picta (western painted turtle): 101936816
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Entry
101936816 CDS
T04662
Name
(RefSeq) transcription factor Sox-17-alpha-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101936816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpic03000
]
101936816
Transcription factors [BR:
cpic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101936816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101936816
NCBI-ProteinID:
XP_042713032
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MSSPDAGYASSDDQTQARCSLPIMMPALGPCQWAESLSPLADAKVKSEAAPAGAASSRAK
SESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGECPLVSRAGGAFSSHLPRPG
PELGSGGGSRTLRAACRESYRVMLVPAPRARRLRGPDWTRGWCAGAEGMAGVANGSRPGT
GLARGARGGGWGNGGCRMGGARGGAALRRHLPRAEPLGQLSSLQSLLGCQGPLHAYYGQL
CPPAGPARALQLPPQPCQPSPPPEAQQCREPLEHLSQDELLGDVDRTEFEQYLHFACKPE
LGLHFPGHEAGLPAPDAHGPISSVVSDASTAVYYCTYPDA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgcgggctacgccagcagcgacgaccagacgcaggcaaggtgctcg
ctccccatcatgatgccggccctgggcccctgccagtgggcagagtccctgagccccctg
gcagacgccaaggtgaagagtgaggcggccccggcgggggctgcgagcagccgggccaaa
agcgagtcccgcatccgccggcccatgaacgccttcatggtgtgggccaaggacgagcgc
aagcggctggcgcagcagaacccggacctgcacaacgcggagctcagcaagatgctgggt
gagtgtccgctcgtgagccgggccgggggggctttctcctcccacctgcctcggcccggc
ccggagctgggaagtgggggaggctcccgcactctgcgagcggcgtgcagggaaagttac
cgagtgatgctggtacctgccccgcgagcgaggcggctgcggggcccggactggacccgg
ggctggtgcgctggggcggagggtatggcaggagttgccaatggctctcgcccagggact
gggttagcgaggggagctcgaggcggcgggtgggggaatggaggctgccggatggggggc
gcccggggtggcgccgcgctccgcaggcacctgccccgcgccgagccgctggggcagctc
agctccctgcagagcctgctgggctgccagggccccctgcacgcctactacgggcagctg
tgcccgcccgccggcccggcccgagctctccagctcccgccgcagccctgccagccctcg
ccgccgcccgaggcgcagcagtgcagggagccgctggagcacctgtcgcaggacgaactg
ctgggcgacgtggatcgcaccgaattcgagcagtacctgcacttcgcctgcaagcccgag
ctagggctccacttcccgggccacgaagccggcctgcccgcgccagacgcccacgggccc
atctcctccgtggtttcggatgcaagtactgctgtgtattactgcacttacccagacgcc
tga
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integrated database retrieval system
