Chrysemys picta (western painted turtle): 101936852
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Entry
101936852 CDS
T04662
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X2
KO
K10858
DNA mismatch repair protein PMS2
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03430
Mismatch repair
cpic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101936852 (PMS2)
03460 Fanconi anemia pathway
101936852 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpic03400
]
101936852 (PMS2)
DNA repair and recombination proteins [BR:
cpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
101936852 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
101936852
NCBI-ProteinID:
XP_008162803
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MPQNLFTITGFVSHCDHGVGRSTTDRQFFFVNQRPCDQSKISKVVNEVYHMYNKHQYPFI
VLNICVDSECVDINVTPDKRQILLQQEKVLLAILKTSLVGMFGSNVNKLNINQKLLDITG
NFKKIVAEETEKPQTGMLLDSAAQNPRGEEKRAMTIVKLRESFSLHQMTESSFQSPSNVG
KQHNSPGKRELMSFLNTSSPVKSQKSISSKESEHWRQMDSNTYSVTSRDLRKLENDTDSG
CGSTSAESNVGFSTPEVGSCLSNESAGSSPEEEFRISKEELQSVCLETVKLSEESLECDA
KLSGVEHELTQMGEQNERSELPQQANSFSPNVKRFKSEQVNLKAATCPELRNAENCASVP
HVDVPIEIKKKTLPLEFSMSSLAERVKRLIQQQQKKAEAQNYRRFRAKISPGDNKTAEDE
LRKEISKEMFAKMEIIGQFNLGFIVAKLNSDLFIIDQHATDEKYNFEMLQQHNVLQGQKL
IAPQNLNLTAVNETILIENLEIFRKNGFDFVIDEDAPVTERVKLISLPTSKNWTFGPQDI
EELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALTVNEMKKLITHMGEIEHPWNC
PHGRPTMRHIVNLDLISQE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgccacagaatctttttactattacaggcttcgtttcccattgtgatcatggtgttgga
aggagtacaacagatagacagtttttctttgtcaatcagcgaccatgtgaccaatcaaag
atttccaaagttgtgaatgaagtttaccacatgtacaataagcaccaatatccatttatc
gttcttaacatttgtgtagattctgagtgtgttgacatcaatgtaactcctgacaagagg
caaattttactgcaacaggagaaagttttgctagcaattttaaagacgtctcttgtggga
atgtttggtagcaatgttaacaaacttaacatcaatcaaaaactgctggatattacaggt
aacttcaaaaagatagtagcagaagaaacagaaaagcctcagacaggaatgctgcttgat
tctgcagcccagaatccaaggggagaagagaaaagagcaatgactattgttaaattaaga
gagtcattctctctccatcaaatgacagaaagcagttttcagagccctagcaatgtcgga
aagcaacacaactccccggggaagagagaacttatgtcatttcttaacacttcaagtcct
gtaaagagtcaaaagtccatctccagcaaggagtctgaacactggaggcagatggactca
aatacatactcagttactagcagagatttgaggaagttagaaaatgacacagattctgga
tgtggtagcacctctgcagagtcaaatgttggctttagtactccagaagttggtagctgc
ctcagcaatgaaagtgcaggcagctcacctgaagaagagttccgtatttcaaaagaggag
cttcaaagtgtatgtcttgaaactgtcaaacttagtgaggaatcattggaatgtgatgcc
aaattatcaggggttgaacatgaattgacccaaatgggtgaacagaatgaacggagtgag
ttacctcagcaagccaatagtttttccccaaatgtgaagcgttttaaaagtgagcaggtt
aatttaaaggcagccacctgtccagaactgagaaatgctgagaactgtgcatcagtgcca
catgttgatgtaccaattgaaattaaaaagaaaactctgccacttgagttctctatgagt
tctttagcagaaagagtaaaaaggctaatacagcagcaacagaaaaaggcagaagcacag
aattatagaagatttagagcaaagattagccctggagacaataaaacagcagaggatgaa
ttaagaaaagaaatcagtaaagagatgtttgcaaaaatggaaatcataggtcagttcaat
ttaggatttatagtagccaagctgaactctgatctcttcataattgaccaacatgctact
gatgaaaaatacaactttgagatgttacaacagcacaacgttctccaaggtcagaagctg
atagcgccacaaaatcttaatttaactgctgtaaatgaaactatattgattgaaaacctg
gagatttttagaaaaaatgggtttgattttgtcattgatgaagatgctcctgtaactgaa
agggttaagttgatttccttgccaacaagcaaaaattggacttttggtccacaggacata
gaggagttgattttcatgttaagtgattgcccaggagtcatgtgtaggccctccagggtc
agacagatgtttgcttctcgagcttgtagaaaatctgtgatgattggaactgcacttact
gtaaatgagatgaagaaattgatcacccacatgggtgagattgagcatccttggaactgt
ccccatggaaggcccactatgaggcacatagtcaatttagatctaatttctcaagaatag
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