Chrysemys picta (western painted turtle): 101936958
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Entry
101936958 CDS
T04662
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101936958 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpic04131
]
101936958 (PEX1)
Membrane trafficking [BR:
cpic04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
101936958 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
PEX-2N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
AAA_18
RuvB_N
DUF815
AAA_22
ABC_tran
TIP49
RNA_helicase
AAA_5
AAA_33
AAA_28
Sigma54_activat
AAA_29
TsaE
NACHT
AAA_2
AAA_7
IstB_IS21
AAA_19
APS_kinase
NB-ARC
nSTAND_NTPase5
Sigma54_activ_2
Vps4_C
ATPase_2
Bac_DnaA
NTPase_1
KTI12
DUF87
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
101936958
NCBI-ProteinID:
XP_008161675
LinkDB
All DBs
Position
2:12769950..12825726
Genome browser
AA seq
1334 aa
AA seq
DB search
MFTDTADSIARRRHLPTFPRAPQPGSTSSSPRKQPITETGSVYRALIGSGRGSTREIWTG
QTAPTESLERTANQRKRGQAVKVSWGHQPIFLSWMEIRHHGHHGENIAEINRHLAEKLGI
AEGEQIFLEPCSQVLSCQQVEVEPLSADDWEILELHASSLEKHLLDQIRIVFPKAIFPVW
VEQNTHIYIRIGTLKPPASYGRLEPRTQLFVCPKTRQLEENTTNLPSSKSDFLHERFIKS
NMDQGEIIKEPLAKESHLNPDVLEQCKPDAKETFGSNVLPNVWNFIGSIFSRSPEQKQET
SCGPSEMSAFRDELLNLIHMDSIFRVCQSQPPSVQSTSATKAFQKNTIHVFPWNLEFVDL
DPNIKVSYGKISKLRSLRQRHREAKQNLPFEKQKQMSSTEDRNQYGSNISQESSEISVVQ
IVWNGFEDLESAIKHNNSVEAMHVGRVWIPDGLRKRIHIEMHATVRIKSVESVPKIPASL
RLQPKRNLHKDISEDDIKSAFSSWLEDTTTVDLPWIMTDTHCIQLVVKEVVQCVSTGMEE
FVLSVVHPSHTEENKSENIFMLDPSLLQKTNIQVLIHPMPTKANDDSTQSTIHDTDQILP
FHKLNSLGGVGKLGTSTFEHITHSLLGRPLSQKLATIAVGLRSGAVLLTGTKGSGKSTLA
KAICKEAFDRLDAHVEVIDCKALRGKRLENIRKKVEEVFLEAAWRQPSILLMDDLDHIVG
VPSTPEHENSPEAVQSYRLAHVLKDVIKEVISMGSLIALIATSQSEHSLHPSLVSGQGTH
IFQCFKHIQPPDQEQRCELLHSIIENKLNSKINRFYDLDLQHIAKETEGFIARDFTMLVD
RAIHSCVSNKGACNKEDLNLSTLDFQKALKDFTPSSLRNVNLHKPKDLGWDRIGGLKDVQ
QILMDTIQLPTKYPGLFANLPIRQRTGILLYGAPGTGKTLLAGVVARESGMNFISIKGPE
LLSKYIGASEQAVRDVFNRAQAAKPCIVFFDEFDSIAPRRGHDNTGVTDRVVNQLLTQLD
GVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQTSRFEILKALSHSLPLAND
VDFQHLAAKTEHFTGADLKALLYNAQLEAIHASLGSSLPQDIGSSSDSDLSLSSMVFLNH
SSGSDDSAGDVEGGLEQSLISLEMSELFPEDSRSNIYRLYFGSSYESELGNGTPSELSSQ
CLSGPNSITHDLTGITLRDIVSSQPSMLRTASQEGFQELNQEQIEQLRAEINAIKANYRS
KNGEDVAPSQSGLTRNTLIISQSHLMAALEDTRPSVSQDDWKNFVELYENFQHPKKRKGQ
NGATFRPGQKVTLA
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgtttacagacaccgccgactccatcgccaggcgccgccatcttcccaccttcccccgc
gcgccacagccaggcagcaccagcagctccccgagaaaacagccaatcacagaaacgggg
agcgtttaccgggctcttattggctccgggcggggaagtacaagagagatttggacgggc
cagacagcaccaacagaatccctcgagagaacagccaatcagagaaagcggggccaagct
gtgaaagtctcctggggtcaccagcctatattcttgagttggatggaaatcagacatcat
ggtcaccatggtgaaaatattgctgaaattaacagacacctagcagagaaacttggcatt
gcagaaggagagcagatattccttgagccatgctcccaagtcttatcctgtcagcaagta
gaagtggaacccctctctgcagatgattgggaaatactggagctgcatgcttcctctctt
gaaaagcatcttcttgaccagattcgaatagtatttccaaaagccatcttcccagtgtgg
gttgagcagaatactcatatttacattcgaattggtacactaaagccacctgcttcttat
gggagactagaacctcgtacacagcttttcgtatgtccaaaaacacgccagcttgaagaa
aacaccaccaatctgccttcctcaaaaagtgactttttacatgaaagatttattaaaagt
aacatggatcaaggagaaatcataaaggaacctttggccaaagaatctcatttaaatcca
gatgtcctcgaacagtgtaagccagatgcaaaagagacatttggctcaaatgtcctgcca
aacgtatggaattttatcgggagcattttctctcgctctcctgagcagaaacaggagact
tcctgtggtccaagtgaaatgagtgcattcagagatgagctattaaacttgattcacatg
gactctattttcagagtatgtcagtcccagcctcctagtgtacagagcacatcagccaca
aaggcatttcagaaaaataccattcatgtttttccatggaatctggagtttgttgatcta
gatcccaatattaaagtgtcttatgggaagattagtaagcttcgctccctaagacaacgc
catcgagaagcaaagcagaatctaccatttgagaagcaaaagcaaatgtccagcacagaa
gacagaaaccagtatggctctaatatcagtcaagaatccagtgagatctctgttgtgcag
atagtatggaatggatttgaagatctagaaagtgccataaagcataacaacagtgtggaa
gccatgcatgttggaagagtttggattccagatggcctgagaaagagaatacatatagaa
atgcatgcaacggtcagaattaagtcagtggaatcagtccctaaaattccagcatctctt
aggttacaacccaaaaggaatttacataaagacataagtgaagatgacataaaatctgct
tttagttcatggttggaggataccactactgttgatcttccctggataatgacagacaca
cactgcatacaactagttgttaaagaagttgttcagtgtgtttccacaggaatggaagag
tttgtccttagtgtagtacatccttctcacactgaagaaaataaatcggagaatattttt
atgttggatcccagtttgctgcagaagacaaatatacaagttcttatacatcctatgcct
acaaaagctaatgatgacagcacacagtctactatacatgatactgaccagatccttcct
ttccacaaactaaacagtttaggaggagtgggtaaactaggaacatccacctttgagcac
ataacccacagcctcttgggacgtcctttatctcaaaagctagctaccatagctgtggga
ctgcgcagtggagctgtcctgctcacaggaacaaagggaagtggaaagtcaacattagcg
aaggccatctgcaaagaagcctttgatagattggatgctcatgtggaagtaattgactgt
aaggctttaagaggaaaaagattagaaaacatacgaaaaaaagtggaggaagtttttcta
gaggcagcatggagacagccatccattcttctgatggatgatcttgatcacattgttgga
gttccttctacaccagagcatgagaacagccctgaagcagttcagagctatagacttgca
catgttttgaaagatgtgataaaagaagttatttccatgggcagtttgattgcattaatt
gccacaagccagtctgaacattctctgcatccttcccttgtttctggtcaaggaactcat
atatttcaatgcttcaaacatatccagcctccagatcaggagcaaagatgtgaattactg
cattccataatagaaaataaattgaactccaaaataaacagattctatgaccttgatctc
cagcatattgcaaaggaaacagaagggtttatagctagagattttacaatgctagtggat
cgtgccatacactcctgtgtttctaataagggagcgtgcaacaaggaagacttgaatctg
tcaaccttggactttcaaaaagctttaaaagattttactccttcatctctgagaaatgtt
aacctacacaaacctaaagacttgggctgggacaggattggtggcttaaaggatgtacag
caaatactcatggataccatccagttacccacaaagtatccaggattatttgcaaacctg
ccgatacgacagaggacaggaattttgttgtatggtgctcctggaacaggaaaaactctg
ttagcaggtgtagttgcccgagagagtggaatgaattttatcagcatcaagggaccagag
ctcctcagtaaatatattggagcaagtgagcaagctgttcgagatgtctttaacagagca
caggcagccaagccttgtatagttttctttgatgagtttgattccattgcccctcgacga
ggtcatgataatactggagtgacagaccgagtggttaaccaactgttgactcagctggat
ggagtagaaggcttacaaggggtttatgtgttggctgctactagtcgtcctgatttgatt
gaccctgctctgttgaggccaggtcgactggataaatgcctgtactgtcctcctcctgat
cagacttctcgttttgaaatcctaaaagccctcagtcattctctgcctttggcaaatgat
gtggactttcagcatttggcagcaaaaacagagcacttcacaggagctgacctaaaagct
ttactgtacaatgcccagttagaggcaatacatgctagcttgggttcaagtttaccacaa
gatatcggttctagttcagacagtgacctcagtctctcttctatggttttcttaaaccat
agcagtggttcagatgattcagcaggggatgtagaaggagggctggagcagtctcttatt
tccctagagatgtccgagttgtttcctgaagattcaaggtccaacatttatcgtctttac
tttggaagctcctatgaatcagagctaggaaatggaactccttcagaactgagctctcag
tgtttgtctggaccaaactccataacccatgatttaactggcattactttgagagatata
gtatcgtcgcaaccctccatgctcagaaccgcctcacaagaaggtttccaagaacttaat
caagaacaaatagagcaactcagggctgaaatcaatgcaatcaaggccaactacaggagc
aagaatggagaggatgttgcccctagccaatcaggattaaccaggaacactttaattatt
agtcagtcccacttaatggctgcacttgaggacacaagaccatctgtaagtcaagatgac
tggaagaattttgttgaactctatgagaattttcagcatcccaagaagaggaaagggcag
aatggagcaactttcagaccaggacaaaaagtgactttagcataa
DBGET
integrated database retrieval system
