Chrysemys picta (western painted turtle): 101937123
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Entry
101937123 CDS
T04662
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101937123 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpic03400
]
101937123 (MSH2)
DNA repair and recombination proteins [BR:
cpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101937123 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
101937123
NCBI-ProteinID:
XP_005307393
UniProt:
A0A8C3P1S8
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MASAAPVPAGESLWPEGSGAEGGFVRAVLALPDKPDTTVRFFERGEHYTVHGGDAQLAAR
ELFRTRGVIRLLAGGPGNQKLESVVLSKMNFESFLRDLLLVRQYRVEIYKNKAGSKSTKE
NDWYLAYKGSPGNLAQFEEILFGNNDMSTAIGVVGVKLYTADGQRIVGVGYVDTTLRKLS
VCEFPDNDQFSNLEALLVQIGPKECVLSGGETAGDMGKLRHIIQRGGIMITDRKKAEFTT
KDIVQDLNRLLKSKKEEQVTSATLPEIEKQVAVSSLSAVIKYLELLSDESNFGQFELTSF
DLSQYMILDNAAVRALNLFQSSVENANNTQSLVGLLNKCKTPQGQRLVNQWIKQPLTDKN
RIEERLNLVEAFVVDTELRQCLQEELLRRFPDLNRLAKKFQRQVATLQDCYRMYQAINQL
PNVVQALEKHEGTHQMLLLAVFVMPLNDLNSDFSKFQEMIETTLDMNKVENHEFLVKASF
DPNLTELREKMNKLEESMQTLLKTAARELGLEAGKNIKLDSNSQLGHYFRITCREEKVLR
NNAKYKILDTQKNGVKFTNSKLSSFNEDYIRSREEYEEAQEAIVKEIINIASGYVEPIQT
MNDVIAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGSRHPCIEVQDDIAFIPND
VNFEKGKQMFHIITGPNMGGKSTYIRQAGVIVLMAQIGCFVPCDSAEVTIVDCILARVGA
GDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKI
CAFCMFATHFHELTALANQVPTVNNLHVTALTTDEMLTMLYRVKKGVCDQSFGIHVAELA
AFPKHVIESAKEKALELEEFQTIGKPEESEGEPAAKRRYREKEEGEKIIQEFLCKVKALP
LRDMSEEDIRTKLKQLKAEVLAKNNGFVNEIVSRTKVTP
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcggcgcctgtccctgcgggggagtcgctgtggccggagggctcgggcgcc
gagggcgggttcgtgcgcgcggtcctggcgctgcccgacaagcccgacaccaccgtgcgc
ttcttcgagcgcggcgagcactatacggtgcatggcggggacgcgcagctggccgcccgc
gagctcttccgcacccgcggcgtcatccggctactggcggggggcccaggcaatcaaaaa
ctcgagagtgttgtgcttagtaaaatgaactttgaatcttttctgagagatctacttctg
gttcgtcagtacagagttgaaatttacaagaacaaagcaggaagtaaatctaccaaagag
aatgactggtatttggcatacaagggttctccaggtaaccttgcccagtttgaggaaatt
ctctttggcaataatgacatgtcgactgccattggtgttgtgggagttaagctatatacg
gctgatggacaaagaatagttggagttgggtatgtcgacactacgctcaggaagctgagt
gtctgtgagtttccagataatgatcaattctcaaaccttgaagctctgctggttcaaatt
ggacctaaggaatgtgtgctatcaggaggagagactgctggagatatgggaaaactacga
cacatcattcaaagaggaggaatcatgattacagaccgaaaaaaggctgaattcacaaca
aaagatattgtgcaggatctcaaccgcttgctaaaatcaaaaaaggaagagcaagtgact
agtgcaacattaccagagatagaaaaacaggttgctgtttcatccttgtcggcagttatc
aagtatttagagctcttgtcggatgaatctaactttggacaatttgaattgactagcttt
gacctcagtcaatatatgatactggataatgcagctgttcgagcccttaaccttttccag
agttctgttgaaaatgccaacaatacacagtcattggttgggttattaaataagtgcaaa
actcctcaaggacaaagactggttaatcagtggatcaaacagccacttacggacaagaac
agaatagaagaaaggttaaatttggttgaggcctttgtggtagacacagaactacggcag
tgccttcaagaagagcttctacgtcgttttccagatctcaaccggctagccaagaaattt
caaagacaagtagcaaccctgcaggactgttaccgaatgtatcaagctattaaccaactg
cctaatgttgtacaggcactggaaaaacatgaaggaacacatcagatgttattgctggca
gtatttgtaatgcctcttaatgatctcaactctgacttctccaagtttcaggaaatgata
gaaacaactttagacatgaacaaggtggaaaatcatgaattccttgtgaaggcttctttt
gatcctaatctgaccgagttgagagagaagatgaacaaactagaggagagcatgcagact
cttctaaagactgcagccagagaactaggcttggaagctggcaagaacatcaaattggac
tccaattcacagttaggacattacttccgaattacctgccgggaagaaaaagtccttcgg
aacaatgcaaaatataagatcttagatacccagaagaatggtgtgaaattcacaaacagt
aaattgagctccttcaatgaagactacataagaagtagagaagagtatgaagaggctcag
gaagccattgttaaagaaatcattaatattgcttcaggatatgtagagccaatacagaca
atgaatgatgtgatagctcagttagatgctgttgtcagttttgctcatgtatcaaatgga
gcacctgtgccgtacgtccgtccggtcattctggaaaagggacaaggaagaattgtgctg
aaaggttccagacacccttgcattgaagttcaagatgacatagcattcatccccaatgat
gttaactttgagaagggcaagcagatgttccatattattactggtcctaacatgggaggg
aaatcaacatacattcgccaggctggagtgatagttcttatggcccaaattgggtgcttt
gtaccatgtgactcagcggaagtgactattgtggattgtattctcgctcgggtaggagca
ggagacagtcagttgaaaggtgtctcgactttcatggcagaaatgttagaaactgcatca
attcttcggacagcatctgaaaactctttaataatcattgatgagttgggaagaggaact
tcaacatatgatggatttgggttggcatgggctatttcagaatatatcgccagcaaaatt
tgtgccttctgtatgtttgctacgcattttcatgaactgacagcacttgctaaccaagtg
ccaactgtgaataatttacatgttacagcactaaccactgatgagatgctgactatgctt
taccgtgtcaagaaaggtgtctgtgatcagagttttggaatacatgtagcagagcttgct
gcttttccaaagcatgtaatagagagtgcaaaagagaaggctctggaactagaggagttc
caaactattggaaaacccgaggaatctgaaggagaaccagcagctaagagacgctacaga
gaaaaagaggaaggtgaaaaaataattcaggaattcctttgcaaagtgaaagcattgccc
ttgagagacatgtcagaggaggacattagaaccaaactgaaacaattgaaagctgaagtg
ctggcaaagaacaacggttttgtgaatgaaattgtttcccgaacaaaagttactccatga
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