Chrysemys picta (western painted turtle): 101937238
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Entry
101937238 CDS
T04662
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101937238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpic03021
]
101937238
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101937238
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101937238
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101937238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
101937238
NCBI-ProteinID:
XP_005283027
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MISLPLGHSPIQSQLQIETRCWELPSKPRPPSPVPSACCRRRGCRFLGAQRGRELGAQPG
FLAGSEKRSAGRCWGGRLQRGCSTQAVNSEQAAGRRGRADMGGREFVAGPFFNPIPQLGL
FSLPEAEGEGWPGSTLGLGPGWGYLPRPAGWEEMQELIAGVEKLMFDLERDVEHQRGALL
LPFPGMDKSGASVCEFFLRGLCAKGLMCPFRHISGEKTVVCKHWLRGLCKRGDLCEFLHE
YDMSKMPECYFYSKFGECSNRECPFLHIDPASRIKDCPWYDRGFCKQGPLCKYKHTRRVM
CVNYLAGFCPEGPKCKFMHPKADLMQCNSDLSQGLPPPSRAVDGKSVHEQQAPEVLLLSH
QPGARAAQCQRKKAQEAGGYPYGLLRPLGQVTCFKCGEKGHYANKCSKSRLGIQLGK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatttccctaccgctggggcacagccccattcaatcacagctgcaaattgagaccaga
tgctgggagttaccctccaaaccgcggcctccttcaccagtcccctctgcttgctgccgg
agaaggggctgcagattcctgggggctcagcgggggagggagctgggggctcagcccggt
ttcctagccggctcggagaagaggagtgctgggaggtgctggggaggaaggctgcagagg
ggttgtagcacccaggctgttaactcggagcaagctgcaggaaggaggggaagggcggat
atgggagggagggaatttgtagctggccccttcttcaatcccattcctcagctggggctc
ttcagcctgcctgaggcagagggggaaggctggcctggctccactctgggcctggggcct
ggctgggggtatctcccgcgtcccgctggctgggaggagatgcaggagctcattgctggg
gtggagaagctcatgtttgatttagagcgggatgtggagcaccagcgaggggccctgctc
ctgcccttcccaggcatggacaagtcaggggcgtccgtgtgtgagttcttcctccgagga
ctgtgtgcaaagggcctgatgtgtcctttccggcacatcagcggggagaagacggtggtg
tgtaagcactggctgcgggggctgtgcaagaggggagacctgtgcgagttcttgcacgag
tacgacatgagcaagatgccggagtgttatttctactccaagttcggcgagtgcagcaat
agagagtgccccttcctgcacattgatccagcgtccagaattaaagactgtccctggtac
gacagagggttctgcaaacagggtcctctgtgtaaatacaagcacaccaggagggtgatg
tgtgtcaactacttagctggcttctgccccgaaggacccaaatgcaaattcatgcacccc
aaggcagacctgatgcagtgtaactcggatctctcccaggggctgccaccgccatcccgg
gctgttgatggcaagagtgttcacgagcagcaggccccggaagtcctgttgctttctcat
cagccgggggctagggctgcccagtgccagaggaagaaggcacaggaggctggtggctac
ccctatggactgctccggccccttgggcaggtcacatgcttcaagtgtggagagaagggt
cactatgccaacaaatgcagcaagagtcggctgggaatccaactggggaaatga
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