Chrysemys picta (western painted turtle): 101937250
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Entry
101937250 CDS
T04662
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101937250 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101937250 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
cpic03016
]
101937250 (ZCCHC7)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
101937250 (ZCCHC7)
Transfer RNA biogenesis [BR:
cpic03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
101937250 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
101937250
NCBI-ProteinID:
XP_005308894
UniProt:
A0A8C3FHH8
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All DBs
Position
7:complement(12548790..12702994)
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AA seq
581 aa
AA seq
DB search
MFGGHGDIETYDDDLYREESSSELSVDSEVEFHLYSQVHYAQSLGKVNGQEENEEIVDSV
EKQVQSSVLINKLDQGKNLIFSDNEVIQISDGPEVIILSDTPDEDSVYKSKVKKTATALT
PAKQYSQPGCSTRNPARASAPTTLVSDAKKSSKEKRASEKSKPTSAGRVRMIQEILVIED
SSNDEEEEESTISESDNVESWMLLGCDTDVRDENIILNIEGCGTAVSEGEDGVDWSISDK
DLEAQIGNYAPLRRTSRYYATDKNVTCRNCDKRGHLSKNCPTPKKIPPCCLCAERDHLQN
TCPARFCLNCCLPGHCSRECLERAYWHKHCNRCDMKGHYADACPEIWRQYHLTTRPGSIK
KSSSYSEHSALVYCYNCSQKGHYGYECSEKRMYNGAFPSSPFIYYYDDKYDIKRRAQRAK
RKVEELQEAGLLPAQFKRLRKEEECRGQCLKKKKNLWKEHVKSPKEEKRHKKANKKSWAE
EHKEKKHKKDVQRNNDQEEDFPRGGRTHFPKGSKKGSTKHHSSAFSPHGRKTKNGQELLD
AAKKKKKKRRQRNKKDSSSTIDESLFLIKQRKKKSKQESSC
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggggtcatggagacatagaaacatatgatgatgacctttatcgtgaggagtca
tccagcgaactaagtgttgacagtgaggtagaatttcatctctacagccaggtccattat
gcacagagtcttggaaaagtcaatgggcaggaagagaatgaggagatagtggactctgta
gagaagcaagttcagagttcagttttgatcaataaattggaccagggcaagaaccttata
ttttcggacaatgaggttattcagatttcagatggccctgaggtcatcatcttgtctgac
acacctgatgaagacagtgtttacaaaagcaaagtgaagaagacagcaaccgccctaaca
ccagcaaaacaatatagtcaaccaggatgctccacacggaaccctgctagagcttctgca
cccactaccttggtttctgatgcaaaaaagtcaagtaaagagaaaagggctagtgagaag
tctaaaccaacttctgctggtagagtacgcatgatccaagagattctggtaatagaggat
agctcaaatgatgaggaagaagaggagagcacgatctctgaaagtgataatgtggagagc
tggatgctattgggatgtgatacagatgtcagagatgaaaatatcattttgaacattgaa
ggctgtggaactgctgtcagtgaaggagaagatggagtggactggtccatcagtgataaa
gacctagaggcacagattggtaattatgcacccctgagacgcaccagcagatactatgca
acagacaaaaacgttacttgtagaaattgtgataaacggggtcatttgtccaaaaactgt
cctactccaaagaaaattcccccttgttgcttgtgtgcagagagagatcacctacaaaat
acctgcccagcacggttttgtttaaactgctgtttgcctggacactgttctagggagtgc
cttgagagagcttattggcataaacattgtaaccgctgtgatatgaaaggccattatgct
gatgcttgcccagaaatatggaggcagtatcacctaacaaccagaccaggatcaatcaag
aagtccagttcgtattctgagcattctgctttggtgtactgctacaactgctcccagaaa
ggacattatggatatgagtgctcagagaagcggatgtacaatggggcattcccttcttcc
ccattcatctactactatgacgataagtatgacatcaagaggagagctcagagggcaaag
agaaaggttgaagaacttcaagaagccggccttttgccagcgcagttcaagagactgcgc
aaggaggaagagtgcaggggacagtgtcttaagaaaaagaaaaacctttggaaagagcat
gtcaagagtcctaaagaagaaaagcgccacaaaaaggccaataagaagtcctgggcagag
gaacacaaagagaagaaacacaagaaagatgtccaaaggaataacgaccaggaggaggac
tttcctagggggggtagaacacacttccctaagggcagcaaaaagggcagcacaaagcat
cacagctctgccttctctccacatggcaggaaaacaaaaaatggccaggagctgctggat
gcagctaaaaagaagaagaaaaagagaaggcagagaaacaagaaagacagtagttccacc
attgatgagagcttattccttataaaacagaggaaaaagaaatcaaaacaggaatccagc
tgctaa
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