Chrysemys picta (western painted turtle): 101937479
Help
Entry
101937479 CDS
T04662
Symbol
USHBP1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1 isoform X2
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpic03037
]
101937479 (USHBP1)
Cilium and associated proteins [BR:
cpic03037
]
Primary cilia and associated proteins
USH complex and associated proteins
101937479 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
101937479
NCBI-ProteinID:
XP_023963909
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MEKGELDSISEREEEADVAGADERAILRYEEHITTLLVTIAQLHSKAERLQQRRTREEDE
YSDQCSEYTASLPRCVQRPRSLAIRPFPMGCMEEGGSSDVFLDLQQAVASLENAVFSRRS
HARLLGSAGGETGTGGPSAAGEEWAQIAKTLEELEQGLGGLAGLPEDNGSCPWKAAPRAP
GEKTSEASPGLSAEDMSWIKNEITTYAERNAALRVALGSKEEELSRSKVTLQAFQEEREK
LQRKVKELQDSLLRMEMPSQPCSPSASVSDTVSTRGSVSPGGEGEPWPFQDPVAAAQSLI
RCFQSCSSTQHLCRLFPQHRPPASESHVREWEARTQQLRGCIEQLKGLNQLLSGTLREWK
GHSERLSMRLGQHESNSTALCLAAQYSERCMEAYEVLLPLAGVKLGPWLEPEEEGDALDK
GDPGERAPNSPGGRTGAVLDEARRFLGRAEPEGEEAGSGQDGAAGTHGWKSAPSPGAQAP
GGAEEGILYEYVRRLRVEQASVEVSLLDLGCQAAPGSVGAVIQSNDAIKAMVDEAVRVAG
GVLPGETPRPKMEKPQLLHDLVAIRESMADLKTRLHLAEKETRGLELCTYTHRAQEAAHL
LLIEHLQGELDEQRGRRPSSGSSSSGDSSSCSSCRGDVGRREAEAARPQAALDRETMMLE
LVGALARSRELRGQAQALAASLEQRSAASRAQQAQCVGITRDFFQAHSALVLAYRNARRK
QEAQLRRLEAQMGAMGERHGEQLRSLTQAVQRLEERRVAAAGSETCI
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggcgagctggactcaatctccgagagggaggaggaggccgacgtagcaggg
gcggacgagcgggcaatcctgcgctacgaggaacacatcaccacgctgctcgtcaccatc
gcccagctccacagcaaggccgagcggctacagcagaggagaaccagagaggaagatgag
tattcagaccagtgctccgaatacacagcaagccttcccaggtgtgtgcagaggccccgg
agcctggccatccgtccgttccccatgggctgcatggaggaaggaggcagctccgacgtg
ttcctagatctgcagcaggctgtggcctctctggagaacgccgtgttctcccggcggagc
catgctcggctgcttggtagcgctggtggggagacgggcacgggtggccccagcgcggcg
ggggaggagtgggcccagatagccaagaccctggaagagctagaacaaggcctggggggt
cttgcgggactcccggaggacaacgggagctgtccctggaaggcagcacccagggcgccg
ggggagaagacgagcgaggccagcccagggctctcagcagaggacatgagctggatcaag
aatgaaataaccacatacgcagagaggaacgcagctctccgggtggcgctagggagcaag
gaggaggagctaagcaggtccaaggtcaccctgcaagcattccaggaggaacgggagaag
ctccagagaaaggtcaaggagctgcaggactcgctgctcagaatggagatgccgtcccaa
ccctgcagcccctcagcatccgtcagtgacactgtcagcaccagggggtccgtcagccct
ggcggggaaggggagccctggccattccaggacccagttgccgcggcccagagcctgatc
cggtgctttcagagctgctccagcacccagcacctctgccgcctgttcccccagcaccgc
cccccggcgtcggagagccacgtcagggagtgggaagctcggacccagcagctgcgaggg
tgcatcgagcagctcaaaggcctgaaccagctgctctcggggaccctgcgggagtggaag
ggccactcggagcggctcagcatgcggctggggcagcacgagtccaacagcacggccctg
tgcctggccgcgcagtacagcgagcgctgcatggaggcctacgaggtgctgctgcccctg
gccggggtgaagctggggccctggctggagccagaggaggagggagacgccctggacaaa
ggagatcccggggagcgcgcccccaacagcccgggcggcaggacgggggccgtgctggac
gaggccaggaggttcctggggagagcagagcccgagggcgaggaggccgggtcgggacag
gacggggctgccgggacccatggatggaaaagcgcccccagtcccggggcccaggcgccc
gggggagcagaggaggggatcctgtacgaatacgtccggcggctgcgggtggagcaggcc
tccgtggaggtctccctgctggatctgggctgccaggcggcccctggttccgtcggtgcc
gtgatccagagtaacgacgccatcaaggccatggtggacgaggccgtcagggtcgcaggc
ggggtcctgcctggggagacaccaaggccaaagatggagaagccgcagctgctgcacgac
ttagtggccatcagggagtcaatggcggatctgaagacccggctgcacctggcggagaag
gagacgcgaggcctggagctctgcacctacacgcaccgggcgcaggaggccgcccacctg
ctgctcatcgagcacctgcagggggagctggacgagcagcggggccggcgccccagctct
gggagcagcagcagcggagacagcagcagttgcagcagctgccgcggggacgtcgggaga
cgggaggcagaagcggcgagaccccaggctgccctggatcgggagacgatgatgctggag
ctggtcggggcgctggcccggagcagggagctgaggggtcaggcccaggccctggcggcc
tccctggagcaacgcagtgcggccagccgggcgcagcaggcccagtgcgtcgggatcacc
agagacttcttccaggctcacagcgccctggtgctggcctacaggaatgccaggaggaag
caggaggctcagctgcggaggctggaggcccagatgggcgcgatgggcgagcggcacggg
gagcagctgcgctcgctcacgcaggccgtgcaaaggctggaagagcggcgcgtggccgcg
gccggcagcgagacctgcatctag
DBGET
integrated database retrieval system
