Chrysemys picta (western painted turtle): 101937540
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Entry
101937540 CDS
T04662
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X2
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101937540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101937540
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101937540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
101937540
NCBI-ProteinID:
XP_005291821
UniProt:
A0A8C3HMP1
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Position
8:37240865..37278039
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AA seq
554 aa
AA seq
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MATELEPPASGAAPLEAEEDEEHWLYGDDTTGKQEDGPIARHAESSHPLQDAPQESRPVT
GEDREMSQHAPPSGEDDEEDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYG
TSSSAKLQPKGIDLDATGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKA
YCEKQRRLQLGLDPSPPISSENKITVQQGRTGNAEKEPENNIIKTEFKTDFVALIGGRMK
AGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGNKPQLPQQPQQP
SQPQQPPQQQPFVPPAGPPPPPIAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLF
PPPLAPPPALLIPTLDGQPAGYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTVDKGT
SSSSSSHWEYSGSRRERERERERERDRDRTPTTSEYNNDDERYRYYSRERSYDFERDYRR
SRDRSREREDRHRERRHREKEESSKHKSSRRKQHENEEGESHRRHKHKKNKRSKEEKEAS
DDGVAEGDEQDAKE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccccctgcctcgggcgcggcgccgctggaggcggaggaggac
gaggagcactggttgtacggggatgacaccactggtaagcaagaagatggaccaattgca
agacatgcagaatcttctcatcctttgcaagatgctcctcaggagagccggcctgtcact
ggtgaagaccgagagatgtcacaacatgcccctccgagtggtgaagatgatgaggaagac
agtgatagcgacagtgatgatgatgatgtgaaagttaccattggcaacattaaaacagga
gcaccatcgtacatggggactcctatgaatctaaacttaaaaacaggtagaggctatgga
acatcctcttcagccaagttgcagcccaaaggtattgatctagatgccacagggaatata
aatggattgcctgtaatagaagtggatttagattcgtttgaagacaaaccgtggcggaaa
ccaggtgctgacctttctgattactttaattatggattcaatgaagaaacatggaaagct
tattgtgagaaacagcgacggcttcagcttggactggatccctctccacctatcagcagt
gagaataagatcacagttcagcaaggaaggacaggaaatgcagagaaagagccagagaac
aacattatcaaaacggaattcaaaactgactttgtggctctgataggagggcggatgaag
gctgggcctccacctaataggaagctgggtgggacaattgatgtgattggtggacaggca
ggcactattaggagggtagaaggaagacgccgcgataaacacgcctctgaggaaaatccc
attcaggttcttggagatcatggaaataagccacaactcccacagcagccccagcaacca
tcacagccccagcagccacctcagcaacagccgtttgtaccaccagcaggtcccccacct
cccccaattgctgggccacccccaccacactttctccaccctccccctccagttacttct
gtcccacctcctctgcatcctccaggcttgccaccaccaggtcccattccagggctgttc
cctccacctctggctcctccaccagctctcctcattccaacacttgatggccaacctgcc
ggctacaataacaggcagcctccaccatttggatacaactctgcagattctggtttcatc
agctaccctcctatttccacttctcacacgccttgggtgacgacagtggataagggcacg
agcagctccagcagcagccactgggagtactccggctcaaggcgtgagagagagagggaa
agggaaagggagagagacagagaccggactccaaccaccagtgaatacaacaacgatgat
gagcgatatcgctactacagtcgagagcgaagctatgattttgagcgggattatcgcagg
agtagagatcggagcagagagcgggaggatcgccaccgggagcgcaggcacagagagaag
gaggagagcagtaaacataagtcttcaagacgtaagcagcacgagaatgaagagggtgaa
agccaccggcgccacaaacacaaaaagaacaagcgcagcaaagaggagaaggaggccagt
gatgatggtgtcgcagagggagatgaacaagatgctaaggagtaa
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