Chrysemys picta (western painted turtle): 101937947
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Entry
101937947 CDS
T04662
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101937947 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101937947 (HBS1L)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101937947 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GIP1_N
DO-GTPase2
DUF6331
Motif
Other DBs
NCBI-GeneID:
101937947
NCBI-ProteinID:
XP_005280363
UniProt:
A0A8C3HXA3
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All DBs
Position
3:complement(33830556..33937204)
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AA seq
687 aa
AA seq
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MARHRNVRGYNYDEDFEDDDLYGQSVEDDCCISPSTAAQFIYSRRDKPSAFAERLEEYGY
EDAEEPAKNITSNHQLTGVDQARLYSCLDQMREVLGETAPEQVMVEAVLNSKFDVQKALD
LVLAQDSKQNVKTKNEEAVITGKTTKGKPRDSQSTRIDSKIVPKVTKMTVSGKKQAMGFE
VPSVIAEENGHSANTPQKRLSSEDSSVTSGVVELVSKSALPSQTIQIPEEQSTVPTPVKK
SSKTRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTSCQSSELTEWYKGKCLLEQIDSF
KPPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCIFCGLKEPIKACTRFRARVLIFNIDVPITKG
FPVLLHYQTVSEPATIRRLLSILHKSTGEVTKKKPKVLTKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcacaggaacgtccgaggttataactacgacgaagattttgaagatgatgat
ctttatggccaatcagtagaagatgattgttgtatttccccttcaacagctgctcagttt
atttactcaagacgtgacaaaccctcagcatttgctgagcgattagaagagtatggctat
gaagatgcagaagaacctgccaagaatattacatccaatcaccagctaactggagttgat
caagctcgtctttattcgtgccttgaccagatgagagaagtgctgggggaaactgcacca
gagcaggtgatggtggaagcagtgttgaatagtaaatttgatgtacagaaggctttggat
cttgtgcttgcacaagacagtaagcaaaatgtgaagaccaagaatgaagaagctgtgatt
acaggaaagacaacaaaaggaaaaccaagagattcccagtcaaccagaatcgattctaaa
attgtgccgaaagttaccaaaatgactgtgtctggaaagaaacaagctatgggatttgaa
gttccaagtgtgattgctgaagagaatggccatagtgctaatacacctcaaaaaagacta
tcatctgaagattccagtgtcacttctggagtagttgagttggtctctaaatcagctctt
ccatcccaaacaattcagattccagaagagcagagtacagtacctactccagtgaaaaag
tctagcaaaacaagacaacaaatagatgtgaaagcagagctggagaagaggcaaggagga
aaacagctgctgaatttagtggtaataggacatgttgatgcaggtaaaagtactctaatg
ggtcatttactctaccttctgggcaacgtgaacaaacgaactatgcacaaatacgagcag
gaatccaaaaaggctggcaaagcttcatttgcttatgcatgggtcttggatgaaactggg
gaggaaagagaaaggggagtaacaatggatgtgggtatgaccaaatttgagacaaagact
aaagttattacattgatggatgctccgggccataaagatttcatcccaaatatgatcaca
ggagctgcacaggctgatgtggctatcttggttgtggatgccagcaggggggagtttgaa
gcagggttcgagactggtggacagactcgagaacatgggttattggttcgctctcttgga
gtaacacaactggcagttgcagtcaataaaatggaccaggtcaattggcaacaggagaga
tttcaggaaattaccagtaaacttggccagtttcttaaacaagctggctttaaggagtcc
gatgtagcttatatccctacaagtggtcttggtggtgaaaatctagtcacaagctgtcaa
tcaagtgaactcactgaatggtataagggaaaatgtttgttagaacaaattgattctttc
aagccaccacagagatcagtggataaaccgtttagattatgcgtatctgacgtttttaaa
gaccaaggatcaggattttgtgtgactggtaaaatagaagcaggctatattcagactgga
gaccgacttctggctatgcctcccaatgaaacttgcactgcaaaaggaatcacactgcat
gatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgttggctgtatattttgtggtctcaaggaacccatcaaagcc
tgcactcgtttcagagctcgagtcctcatctttaatattgatgtccccattactaaagga
ttccctgtgcttttacactatcaaaccgtaagtgagcctgccactattagacgattattg
agtatccttcacaagagtactggcgaagtcacaaagaaaaaacctaaggtcctgactaaa
ggacagaatgctttaatagaactacaaacacaaaggcctgttgccctggaattgtacaaa
gattttaaagaacttggaaggtttatgttacgctacagcggatccactatagctgcagga
gttgtcacagagattaaagaatga
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