Chrysemys picta (western painted turtle): 101937960
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Entry
101937960 CDS
T04662
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpic04515
]
101937960 (PCDH18)
Cell adhesion molecules [BR:
cpic04515
]
Cadherins
Protocadherins
101937960 (PCDH18)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Syndecan
Cadherin_C_2
PAH
PepSY
Motif
Other DBs
NCBI-GeneID:
101937960
NCBI-ProteinID:
XP_005284420
UniProt:
A0A8C3J0K6
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Position
6:9662410..9680630
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AA seq
1141 aa
AA seq
DB search
MNCKNLQMHQISSKMHFMFLFVLMIISFSKDVLGKNLKYRIYEEQRVGSVIARLSEDVAD
VLFKIPNPSSVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITL
PTEHLQLFHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGENSLHT
YSLSANDFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILK
ISISDSNDNSPVFEQQSYIIQLLENSPVGTLLIDLNATDPDEGANGKVMYSFSSHVSSKI
IETFKIDSEKGHLTLLTQVDYEITKSYEIDAQAQDLGPNSIPAHCKIIIKIVDVNDNKPE
INLNLMSPGNEEIAHISEGSPMDTFVAIVRVQDKDSGVNGEIVCKLHGHGHFKLQKTYEN
NYLILTNATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDENDNPPRFQTNRYEVV
ILENNSPGAYITSVTATDPDLGDNGQVTYTILESFILGSSITTYVTIDPSNGAIYALRTF
DHEEVNQIAFVVQARDGGSQQLVSNTTVVLTIIDENDNAPVIVGPALRNNTAEISIPKDA
ESGFHVTRIRAIDRDSGMNSELSCSIIADNEENIFIMDPRSCDIYINVSIESVLSKEWEF
FVIVQDKGSPPLSTKALLKCTVFEYVYPIPSTEATFISQPSLDVSMITIISLGSICAVLL
VIMVIFATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQILKGDITLVPTVNGTLPIRSH
HRASPSSSPTLERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQL
LSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPID
RLLGEGFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEF
QPQQQQQQQQQAFEEDSQPVDSNEKKKSFSTFGKDCQNEEESEDICTSSLLSEMSSVFQR
LLPPSLDTYTECNEMNRSNSLERRKGHLPAKTVSYPQGVAAWAASTHFQNPANNTGAILG
THSSAQPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQ
N
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcaaaaacttacaaatgcaccaaatcagtagtaaaatgcactttatgttcctt
tttgtactgatgataatatctttcagtaaagatgtgctaggcaagaatttgaaatacagg
atttatgaggagcagagagttggatcagtaattgcaagactatcagaggatgtagctgat
gttttatttaaaattcctaacccttcttcagttcgttttcgagccatgcaaagagggaat
tctcccctacttgtagtccgagaggataatggagaaatcagcataggagctaaaattgac
cgggaacaactctgccagaaaaacttaaactgctctatagagtttgatgtgatcactctg
cctactgaacatctgcagcttttccatgttgaagttgaagtgctggatattaatgacaac
tctccccagttttccagagctctcatccctattgaaatatcagagagtgcagctgtagga
acccggatccctttggacagtgcttttgatccagatgttggggaaaattctctgcacact
tattcactgtctgcaaatgatttttttaatattgaagtgcgaacaaggactgatggtgcc
aaatatgcagaactcattgtggttagagaattggaccgggagttgaagtcaagctacgaa
ctccaactcactgcttcagatatgggggtacctcagcgatccggatcgtctattctaaaa
ataagtatttctgattctaatgataacagtcctgtttttgagcaacagtcatatataatt
cagctcttagaaaattcaccagtgggtactttgctcatagatctcaatgctactgatcca
gatgagggcgctaatggtaaagtcatgtattctttcagtagtcatgtgtcttccaaaatt
atagagacttttaaaatagactcagagaaaggccatctgactctcctgacacaagtggac
tatgaaatcaccaaatcctatgaaattgatgctcaagctcaagatttgggtccaaattct
atcccagctcattgcaaaattatcattaaaattgtggatgtcaacgacaacaaacctgaa
attaatttaaacctgatgtcccctgggaatgaggaaatagctcacatttctgaagggtca
cccatggacacttttgttgccatagtcagggtgcaggacaaggactctggtgtgaatgga
gagatagtttgcaagcttcatgggcatggccactttaaacttcaaaagacttatgaaaat
aactatttaattttgactaatgctactctagatagagaaaagagatctgaatacagtttg
actgtaatagctgaagacaaggggacaccaagtctctccacagtgaaacattttactgtc
caaatcaatgatgaaaatgacaacccaccccgcttccagacaaacagatatgaagttgtt
atcttagaaaataactctccaggtgcatacatcacatctgtcacagccacagatccagat
ctaggggacaatggacaggtcacatacactattttggaaagctttattttgggaagttcc
ataaccacctatgtgaccattgacccatccaatggtgcaatctatgcactcagaactttt
gatcatgaagaagtaaatcagattgcctttgtggttcaagctagagatggagggagtcag
caacttgttagtaataccacagttgtgctaactattattgatgaaaatgataatgctcct
gtcattgtgggaccagcactacgcaataacactgcagaaatctcaatccctaaagatgct
gagagtggcttccatgtgactaggataagggctatagacagagactctggtatgaactca
gaactaagctgttccataatagctgacaatgaagaaaacatatttataatggacccaaga
tcatgtgacatctatattaatgttagcatagaatctgttttatctaaagaatgggaattt
tttgtgatagttcaggataaaggcagtcctccactcagtaccaaagcacttctgaaatgt
actgtttttgaatatgtttatccaattccaagcacagaagctacttttattagccagccc
tctctggatgtttctatgataacaattatatcacttgggtcaatatgtgcagtgttgttg
gtcattatggttatctttgctacaagatgcaatcgagagaaaaaggatacaagatcctac
aactgccgtgtggcagaatcaacttaccagcatcacccaaaaagaccatcaagacagatt
ctcaaaggtgacattacacttgtgcctactgttaatggcactttacccatcagatctcac
cacagagcttctccttcatcatctccaaccttagaaagaggacaaatgagcagtcgacaa
agccatcatagtcaccaatcacttaacagtctagtgacaatctcttcaaatcatgtgcca
gagaatttctcactggaactcacccatgctactcctgctgttgagcaggtctctcagctt
ctttcaatgcttcatcagggccaatatcagccaagaccaagttttcgaggaaacaaatat
tccagaagctacagatatgccctacaagatatggataaatttagcttgaaagatagtggc
cgtggtgatagtgaagcaggagacagtgattatgatttgggtagagattctccaattgac
agacttcttggggaaggattcagtgaccttttccttacagatgggagaattcctgcagca
atgaggctatgcacagaggaatgtagagttctgggacactctgaccaatgctggatgcca
cctctgccctctccatcttctgattacagaagtaacatgtttattccgggggaggaattt
cagccacagcagcagcagcagcagcaacagcaggcatttgaagaagattcacagcctgtt
gattccaatgaaaagaaaaagagcttttcaacatttggtaaagactgtcaaaatgaggaa
gagtcagaggacatctgtacttcatctcttctctctgaaatgagcagtgtttttcagcgc
ctgttgcctccttcactggacacctatacagaatgcaatgaaatgaatcgctcaaactca
ctggagcggaggaagggacatttaccagccaagacagtaagctacccacaaggggtggca
gcgtgggcagccagtacacatttccaaaaccctgcaaacaacactggggccatcctaggg
actcactcgagtgcacaaccttcctctaaatggctgccagccatggaagaaatcccagag
aactatgaagaagatgactttgacaatgtgcttaaccacctcagtgatggtaaacatgaa
ctaatggatgccagtgagctggtagcagaaattaacaagctgctgcaagatgtccggcag
aattag
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