KEGG   Chrysemys picta (western painted turtle): 101938025
Entry
101938025         CDS       T04662                                 
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
cpic  Chrysemys picta (western painted turtle)
Pathway
cpic04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:cpic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    101938025 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpic04131]
    101938025 (WDR7)
Membrane trafficking [BR:cpic04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    101938025 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_THOC3 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR55 Beta-prop_TEP1_2nd CFAP251_N ASA1 Beta-prop_EML EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_ACSF4 DSE1_N Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_WDR41 PAC11 PEP5_VPS11_N Beta-prop_WDR19_1st WDR90_beta-prop_4th WDR72_alpha-sol Tricorn_2nd PD40 DNAI3_WD LRS4 Arminin
Other DBs
NCBI-GeneID: 101938025
NCBI-ProteinID: XP_023959128
LinkDB
Position
6:19988258..20331866
AA seq 1495 aa
MAGNSLVLPIVLWGRKAPTHCISAILLMDDVSMIVTGCHDGQISLWDLSLNLEINPRALL
FGHTASITCLSKASASSEKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFT
VGTQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIVTSEVSRMQDTEPVFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSVPSENGQTWTGGDFVSADKVIIWTEDGQSFIYKLPASCLPASDTFRSDV
GKAVENLIPPLLFSVLDRADKQLLICPPITRFFYGRREYFHKLLIQGDSSGRLCIWNVPD
TLELQDNTEGLQMTTSTSLQEAFCKLTPRPAGIIDQLSLIPNSNEPLKVTASVYIPAHGR
LVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRNLRAHRNKVTCLLYPHQVSSRY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCADGSVYVWQMDTGALDRCVMG
ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNVAHQKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
QKASGSSDKGGSFLAGKRAAVLFQQVKETIKENIKEHLLDDEDEDEESMRQRREDSDPEY
RSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEDLDDVCLDRLGMLKPHCSVSFGLLSR
GGHMSLMLPGYNQSIGKPSYGSVEVGRKMSITEGLGRGTYGVSRAVTTQHLLSIISLANT
LMSMTNATFIGDHMKKGPIRPPRPGTPDLSKMKAPPPASSNAAQGQIKQVAPAVSSSTEA
DRSGSDPAPTLRSCFLVNEGWSQLAAMHCVMLPDLLGLEKFRPPLLEMLARRWQDRCLEV
REAAQALLLAELRRIEQAGRKETIDAWAPYLPQYIDSIISPGVTAEAIQTGSASPDSSGS
EVKVQEEEHDLVDDDITAGCLSGLPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEIEP
PKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTFFILFCMVGKALTFLLLQPPSPKLPPHS
TIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLSNITMGLPLSPAADSARSA
RHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQNIHTTALARAKGEILRVIEILID
KMPTDVVDLLVEVMDILMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHG
SVALYDIRTGKCQTIQGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGML
NSAPQLRCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4488 nt   +upstreamnt  +downstreamnt
atggcaggaaacagccttgttctaccaatcgtgctttggggtcgcaaagctcccacacac
tgcatatcagccatactgttaatggatgatgtttcaatgattgtcacaggatgtcatgat
ggacagatatctctctgggacctttcattaaatctagaaattaatcccagagcgctgctg
tttggtcacacagcttcaattacatgtttgtccaaagcctctgcttccagtgaaaaacag
tatatagtgagtgcatctgaaagtggggagatgtgtctgtgggatgtgaatgatgggaga
tgtatagaatttacaaaactcgcctgcacccatactggaatacagttctaccagttcaca
gttgggactcagcgtgaaggcaggctactgtgtcatggccattacccagaaattcttgtt
gtggatgctaccagtctcgaggttctttattccttagtgtcaaagatttctcccgactgg
atcagctccatgagtattattcgatcccatagaacacaagaggatactgttgtagcagtt
tcagtgactggtattctgaaagtgtggattgtaacttctgaagttagtcggatgcaggat
acggaaccagtatttgaggaggagtctaaaccaatttattgtcaaaactgccaaagcatt
tctttctgtgcatttacccaacgatcacttttggtagtgtgctccaaatactggagggtt
tttgatgctggagattattccttgttatgttcagttcccagtgaaaatggacaaacgtgg
actggcggtgactttgtatcagctgataaagtgatcatatggacagaagatggacaaagt
tttatttacaaactaccagccagttgtctaccagctagtgatacgtttcgcagtgatgtg
ggaaaagctgttgaaaatttaattcctcctttactgttcagtgtattggaccgagcagat
aaacagctgcttatctgtccccctattactcgattcttctatggacgcagggagtatttc
cataaacttctaatccagggagattcttcagggagactgtgtatttggaatgtgcctgat
acacttgaactgcaagacaacacagaaggactccaaatgacaacttcaacttctctgcaa
gaagctttttgtaaacttactcctcgtcctgctggaattatagaccaattaagcttaata
ccaaacagtaacgaaccacttaaagttacagccagcgtgtatatcccagcacatggacgc
ctggtttgtggtcgtgaagatggaagcattgttattgtgccagcaactcaaactgcaata
gttcagcttctgcaaggagagcacatgctcaggagaggttggccacctcacagaaatctc
cgggctcatcggaacaaagttacatgtttactgtatcctcatcaggtctcatctcgttat
gaccaaagatacttgatctcaggtggtgtggatttctcagtcattatatgggacatcttt
tctggagaaatgaaacacatcttctgtgtccatggtggagagattacgcagcttctagtt
ccaccagaaaactgtagtgcaagagtccagcactgcatctgctcagtagccagtgaccat
tcagtaggacttttgagtttgcgagagaaaaagtgcattatgctggcatctcgtcacctt
ttccctattcaagtaataaagtggaggccttcagatgattacctggtggtgggatgtgca
gacggatctgtgtacgtctggcaaatggatactggtgcactggatcgttgtgtgatgggg
ataacggcagtcgaaatcttgaatgcttgtgatgaggcagttccagctgcagtagattcc
cttagtcacccagccgtcaatctaaaacaggctatgactagacgtagccttgctgctcta
aaaaatgtggcccatcagaaactacagactcttgctactaaccttctggcttctgaagca
tctgacaaagggaatttgcctaaatattcacacaattctctgatggttcaagccataaag
actaacctaacagatccagatatacatgtgctcttctttgatgtagaagctctgattatt
cagctactgactgaagaagcctctaggcctaatactgcactcatttccccagagaattta
cagaaagcatctggcagttctgataagggggggtcttttctggctggcaaacgagcagca
gtgctcttccagcaagtcaaggaaacgatcaaagagaacataaaagaacatcttcttgat
gatgaagatgaggatgaagaatcaatgagacagagaagagaagacagtgacccagaatat
cgctccagcaaatctaaaccattaaccctgttagagtataatctaaccatggacacagca
aagctttttatgtcctgtcttcatgcctggggtttgaatgaagatctagatgatgtttgt
cttgatcgccttggcatgcttaaaccacactgttctgtgtcctttggtctgctatctaga
ggaggccacatgtctctgatgcttccaggatataaccagtccataggcaaaccatcatat
ggtagtgtggaagtaggaaggaaaatgtccattacagagggactaggaagggggacatat
ggagtatcacgtgcagtcactactcagcatctcctgtctattatctctttggcgaatact
ttgatgagtatgactaatgcaacgtttattggagaccatatgaagaagggtccaatcaga
cctcctaggccaggcaccccagatttgtctaaaatgaaggctcccccacccgcttccagt
aatgcagctcaagggcaaattaaacaagttgctcctgctgtttcttctagcactgaagct
gatcgctctggctctgaccctgctcctactttacgtagctgtttcttagtaaatgaagga
tggagtcaactagctgctatgcattgtgttatgctccctgacctgttgggactggagaaa
tttagaccgcctcttcttgagatgctagctcgcaggtggcaggatcgatgcttggaggta
agggaagctgcccaggccttactgttagcagaattgagaagaattgaacaggcagggcgg
aaagaaacaattgatgcttgggctccatatttaccacaatatattgacagtattatatca
cctggagtgacagcggaagccattcaaactggtagtgcaagtccagattcatcagggtca
gaagtcaaagttcaggaagaagagcatgatcttgttgatgatgacatcacagcaggttgt
ctgtctggtctcccacaaatgaaaaaaatatctacctcttatgaggagagacggaagcaa
gccactgctattgtcttgctaggagtgattggagcagaatttggagctgaaattgaaccg
ccaaaactgttgacgaggccacgcagttccagtcaaattcctgagggatttggtttaact
agtggtggatcaaactattccttggcaagacatactttttttatcctgttttgtatggta
ggtaaagctttgacattccttctgctgcaaccaccaagccccaaacttcctccacacagc
accatccgcagaactgccattgatctgattgggcgaggttttacagtatgggagccttac
atggatgtctccgctgtattaatgggccttttggagctctgtgctgatgctgagaagcaa
ctttcaaacatcacaatggggctgcctctgagtccagcagctgactccgcccgctctgca
cgacatgctctctcactcattgccactgccagaccacccgccttcataacaactatcgcc
aaggaggtgcatagacacactgcgctggcagcaaacactcagtctcaacagaatattcac
accacagctcttgctcgggctaaaggagagatcctaagagtcatcgaaatactaatagat
aaaatgcccacagatgttgtggatcttcttgtagaggttatggacatcctcatgtactgc
cttgaaggatccttagtcaaaaaaaagggacttcaggaatgctttccagccatctgcagg
ttctacatggtcagctattatgagcggagtcacagaatagcagttggagctcgccatggt
tcagtggccctgtacgacatccggactggaaaatgtcagactatccagggccataaaggg
ccaataacagctgtggcttttgctcctgatggacggtaccttgccacttattccaacaca
gacagtcacatctccttttggcagatgaacacctctcttttgggaagtattggaatgctg
aattctgcacctcagctccgctgtattaaaacataccaggtgcctcctgtccagcctgcc
tcaccaggttcacacaatgcactcaaactggcacggctgatctggacttccaatcgcaat
gttattcttatggcgcatgatggcaaagaacatcgatttatggtctag

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