Chrysemys picta (western painted turtle): 101938351
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Entry
101938351 CDS
T04662
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X2
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101938351 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpic03400
]
101938351 (LIG3)
Enzymes [BR:
cpic01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
101938351 (LIG3)
DNA repair and recombination proteins [BR:
cpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
101938351 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Synaptonemal_3
Motif
Other DBs
NCBI-GeneID:
101938351
NCBI-ProteinID:
XP_008172889
UniProt:
A0A8C3F8R1
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MAEQRYCVDYAKRGTAGCKKCKEKILKGMVRIGKVVPNPFTESGGEMKEWYHVKCIFEKL
ERARATTKKIEDITDLEGWEELQDPEKEMINQHISEANSKAATTPKKKATIQAKISPSGQ
ITSPKKELLATPNPSPKKFSGFAAKPGNSDEAPESSPHKSSLSAKKCDPKHKDCLLREFR
KLCAMVAEKPSYNVKTQIIQDFLQKGTAGDGFHGDLYLTIKLLLPGVIKSVYNVNDKQIV
KLFSRIFNCSQEEMVRDLEQGDVSETVRIFFEESKSCPPAAKSLLTIQEVDEFLTQLSKL
SKEDDQQSVLQDIASRCTGNDLKCIIRLIKHDLKMNAGAKHVLDALDPNAYEAFKASRNL
QNVVERVLRNQQEAEKLPGLKRTLSVQASLMTPVQPMLAEACKSIDYAMKKCPNGMYAEI
KYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDFIPQAFPGGHSMILDAEVLLIDNK
AGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDTSLMDRPLRERRKFLHDNMVEIPNR
ILFSEMKHVTKASDLADMINRVIREGLEGLVLKDIKSTYEPGKRHWLKVKKDYLNEGAMA
DTADLVVLGAFYGQGSKGGMMSIFLMGCYDPKSQKWCTVTKCAGGHDDATLARLQTELDM
VKISKDPSKIPSWLKINKIYYPDFIVPDPKKAPVWEITGAEFSKAEAHTADGISIRFPRC
TRIRDDKDWKTATNLPQLKDLYQLSKEKSDFSIVVAEEEGSTASSSGENEGNSRSSTPHK
IAKTPPSKSPAKAKKQEGSKAVGRSPQKKAEDKRGEKRKAAELDDNRKKTLLDIFTGVKL
YLPPSVEDFSKIRRYFVAYDGDLVQEFDTASATHVIGDVDENPGAKRVSPDWIWECIRKR
RLVAPC
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcagaggtactgcgtggactatgccaagcgcggcacagccggctgcaagaaa
tgtaaggagaagatcttgaaggggatggtgcgcattgggaaggtggtccccaaccccttc
acagagtcgggcggggagatgaaggagtggtaccatgtgaagtgcatttttgagaagctc
gagagggctcgggccacaacaaagaagattgaggacatcacagacttggagggttgggaa
gagctccaggatccggagaaagagatgataaaccagcatatctcagaggccaattccaag
gctgcgaccacacctaagaaaaaggcgacaatccaggcgaagatctcccccagtggacag
ataaccagtcccaagaaggagctactagctacccccaatccatcaccaaagaaattctct
ggcttcgcagctaaaccgggcaattctgatgaagcccctgaaagctctccccacaagtct
agcctctctgcaaagaagtgtgacccaaagcacaaggattgcttgctgcgggagttcaga
aagttgtgcgccatggttgccgagaagcccagctataacgtgaaaacgcagatcattcag
gacttcttgcaaaaaggaactgcgggagatgggttccatggtgacctctacctgactatt
aagctgctattaccaggtgtcattaaaagtgtttacaacgtgaacgacaagcagattgtc
aagttgttcagcaggattttcaactgcagccaggaggagatggtccgagacctggagcag
ggagatgtttccgaaactgtgcgcatcttttttgaagagagcaagtcctgccctccggct
gccaaaagtctccttaccatccaggaagtggatgagttcctcactcaactttcaaagctt
tccaaggaggacgaccagcaaagtgtgctgcaggatatcgctagcaggtgcacggggaat
gacctgaaatgcatcatccggctaataaagcacgatctgaaaatgaatgctggtgcaaag
catgtgttggatgctttagatcctaatgcctatgaggcattcaaagcctcacgcaatctc
cagaatgtggtggagcgagtgctgaggaaccagcaggaggctgagaagttgccaggtctg
aagcgaaccctcagcgtccaggcctccctgatgacccctgttcagcccatgctggctgaa
gcctgcaagtcaatcgactacgccatgaagaagtgccccaatgggatgtatgcagagatc
aaatacgatggggagcgagttcaggtccacaagaatggagatcacttcagctacttcagc
cgaagcctcaaacctgtcctccctcacaaagtcgcccattttaaggacttcatccctcag
gctttccctggtggacatagtatgatcctggatgcggaagttcttctgattgacaacaaa
gccggcaaaccgctacccttcgggacccttggagtgcataagaaagctgctttccaggat
gccaatgtctgcttgttcgtgtttgactgcatctatttcaatgacaccagcctgatggac
aggcccctgcgtgagcgtcgaaagtttctccatgataacatggtggaaatccccaaccgg
atactcttctccgagatgaagcatgtcacaaaagcttcagatctggcagatatgatcaat
cgagtcatccgggaggggctggaaggactggtgctgaaagatataaagagtacgtatgag
cccggtaaacgtcactggctaaaagtgaaaaaggactatctgaatgaaggtgccatggct
gacacggcagacctggtggttctgggagctttctatggacaaggcagtaaaggtgggatg
atgtccattttcctcatgggctgctatgaccccaagagccagaaatggtgcacggtgaca
aagtgtgctggcgggcacgatgatgccaccctggctcgcctgcagacggagctggacatg
gtgaagatcagcaaggatcccagtaaaattccaagctggctgaaaattaacaagatctat
tatccagacttcattgttccagacccaaagaaagccccagtgtgggagatcacaggtgct
gagttctctaaagcagaagcccacactgcagatgggatctccatccgcttccctcgctgc
acccggatccgagatgacaaagactggaagacggccaccaacctccctcagctcaaggat
ctgtaccagctctccaaggagaagtcagatttcagtatcgttgtcgcagaggaggagggg
tccacagccagcagcagtggtgagaatgagggaaattctaggtcttccacaccccacaaa
attgctaagacacccccaagcaagtcacctgcaaaagccaagaagcaagaaggcagcaaa
gcagttggtcgatccccccagaagaaggcggaggacaagcgaggggagaaacggaaagca
gccgagctggatgacaacagaaagaagacgctgctggacatatttacaggggtgaagctg
tacctaccgccctccgtggaggacttcagcaaaatccgccggtactttgtggcgtatgat
ggagaccttgtgcaagagtttgacactgcctcagcaacacacgtaataggggatgttgat
gagaaccctggagccaaacgcgtttctcctgactggatctgggagtgtatccggaaacgg
aggctggtggccccctgttaa
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