Chrysemys picta (western painted turtle): 101938486
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Entry
101938486 CDS
T04662
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03030
DNA replication
cpic03410
Base excision repair
cpic03420
Nucleotide excision repair
cpic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101938486 (RFC5)
03410 Base excision repair
101938486 (RFC5)
03420 Nucleotide excision repair
101938486 (RFC5)
03430 Mismatch repair
101938486 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpic03032
]
101938486 (RFC5)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101938486 (RFC5)
03400 DNA repair and recombination proteins [BR:
cpic03400
]
101938486 (RFC5)
DNA replication proteins [BR:
cpic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101938486 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
101938486 (RFC5)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101938486 (RFC5)
DNA repair and recombination proteins [BR:
cpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101938486 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
101938486 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_16
RCF1-5-like_lid
AAA_11
AAA_22
AAA_24
AAA_14
RuvB_N
DEAD
AAA_assoc_2
ResIII
DUF815
ATPase_2
AAA_5
AAA_19
AAA_30
PhoH
TIP49
AAA_7
TniB
nSTAND3
Mg_chelatase
bpMoxR
Thioredoxin_6
DNAX_ATPase_lid
NPHP3_N
AAA_2
AAA_3
AAA_25
Motif
Other DBs
NCBI-GeneID:
101938486
NCBI-ProteinID:
XP_005303301
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
MESAAPKPPPPPAGKSRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYGP
PGTGKTSTILACAKQLYKDKEFNAMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKL
VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPEL
MVPRLQHVIKEEMADVSEDGMKALVTLSSGDMRRALNILQSTTMAFGKVTEDTVYTCTGH
PLKSDIANILDWMLNQDFTTAYKKILELKTLKGLALHDILTEIHLFVHRVDFPPSVRIQL
LIKMADIEHRLAAGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgcagcccccaagccgccgccgccgccggccgggaagagcaggaacctgcca
tgggtggaaaaatatcgtcctcagacactgaatgacctaatttcccatcaggacattctg
agcaccattcagaagttcatcagcgaagatcgtctgcctcaccttctcctctatggaccg
cctggcactggcaagacctccacaattctggcctgtgctaaacagctctacaaagacaag
gaattcaacgccatggttttagagctgaatgcttcggatgacagaggaattgatgtagtc
agaggccccatcctgagctttgctagcacaaggacaatctttaagaaaggttttaagctt
gtgatcctggatgaagcagacgccatgacccaggatgcccagaatgccctaaggcgagtg
attgagaaattcactgagaacaccaggttttgcctgatctgtaactacctctccaagatc
atccctgccttgcagtccagatgcacaaggttccggtttggccccctgactccggaactc
atggtccccaggctgcagcatgtcatcaaggaagagatggctgacgtaagtgaagatggg
atgaaagcattggtgaccctctccagcggggacatgcgcagagctctgaatattttgcag
agcaccaccatggcctttgggaaggtgacggaggacaccgtgtacacctgcacggggcac
ccactgaagtctgacattgccaacattctcgactggatgctgaaccaggacttcaccact
gcctataaaaaaatcctggagctgaagacgctgaagggtttggctctgcatgacatcctg
acagagatccacttgtttgtgcaccgagttgacttcccgccttccgtccgaatccaactc
ctgatcaaaatggcagacatcgagcacagattggctgcggggacaagcgagaagattcag
ctaagctcccttattgctgcgttccaagtcaccagggacttgattgtagctgaggcttag
DBGET
integrated database retrieval system
