Chrysemys picta (western painted turtle): 101939044
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Entry
101939044 CDS
T04662
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04137
Mitophagy - animal
cpic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101939044 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101939044 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpic04121
]
101939044 (AMFR)
Enzymes [BR:
cpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
101939044 (AMFR)
Ubiquitin system [BR:
cpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101939044 (AMFR)
Multi subunit type E3
ERAD complex
101939044 (AMFR)
LMBR1L-GP78-UBAC2 complex
101939044 (AMFR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-rbx1
zf-RING_5
zf-RING_16
zf-C3HC4_4
Prok-RING_4
zf-RING_Vps41
RING_XB3-XBAT31
KH_SLS1_1
zf_RING_Vps8
SHOC1_HhH_tandem
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
101939044
NCBI-ProteinID:
XP_005306325
UniProt:
A0A8C3HD33
LinkDB
All DBs
Position
14:9966784..10008159
Genome browser
AA seq
637 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTGLSALGLLGSVVSAYRALSQGPAGESAPGAGPQPLDVAYYLL
SDSLCVWVLVNTACCFLMLIAKLIQCAVFGPLRVSEKQHLKDKFWNFIFYKFIFIFGVLN
VQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHVRVLTLLIAMLLSCC
GLAVICGVIGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVY
YTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRV
VGNMEARFAVATPEELAVNNDDCAICWDSMQTARKLPCGHLFHNSCLRSWLEQDTSCPTC
RMSLNITDNHRVREDHQRENLDENLVPVAVAEGRPRLNQHNHFFHFDAFSDRQFLLLVTG
SRIASWLPSFSVEVMHTTNILGIAQASNSQLNAMAHQIQEMFPQVPYHIVLQDLQLTRSV
EITTDNILEGRIQVPFPTQRPDSVRPATNSPVERHNSDQEEAETATQTERVPLELSPRLE
EMVEFSEMEAEPSETEDFEARGSRFSKSADERQRMLVQRKEDLLQQARERYLNKTSDEDS
ISESPFLSEGAASDPVTVRRRMLAAAAERRLQMQQTS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctcttcctggagcgcttcccctggcccagcctccgcacctacacggggctc
agcgcgctggggctgctcggcagcgtcgtcagcgcctaccgcgccctcagccagggcccc
gccggggagtctgcgcccggagccgggccccagcccctggacgtcgcctactacctgctg
tcggacagcctctgcgtctgggtactggtaaatactgcctgctgtttcctgatgttgatt
gctaaactaatccagtgtgcagtgtttggtcctcttcgtgttagtgagaagcagcatctg
aaggacaaattctggaatttcatcttctacaagtttatctttatttttggtgtgctgaat
gttcagacagtggaagaggtggtcatgtggtgcctctggttctctgggcttgtgtttctc
cacctcatggttcagctgtgcaaggatcgatttgaatatctttccttctctcccaccacc
ccaatgagcagccacgtccgagtcctgactctgctgattgccatgttactctcctgttgt
ggtctagcagttatctgtggcgttatcggctatacgcatggaatgcacactctagctttc
atggcagcagagtctctacttgtgacagtgagaactgctcatgtgattttacgttatgta
attcatctctgggatctcaaccatgaaggaacctgggagggcaagggaacgtatgtgtat
tatacagattttgtcatggagctaaccttgctttcgctggacctgatgcatcatattcac
atgctgctgtttggcaatatctggttgtcgatggccagcctggtgatttttatgcagctg
cgttatttgttccatgaggttcagcgtagaatccgtcgtcacaagaactacctgcgtgtg
gttggaaacatggaagccaggtttgcagttgcaactcctgaagagctagctgtcaataat
gatgactgtgccatttgctgggactccatgcagactgcccgtaaactcccatgtgggcac
ctcttccacaactcatgcctgcgttcctggcttgaacaggatacatcctgccccacctgc
agaatgtctctcaatatcactgacaaccaccgagttagggaggaccaccagagggagaac
ctagatgagaacttggtacctgtggcagtagcagaaggcagacctcgcttgaaccagcac
aatcacttcttccacttcgatgctttctcagacagacagttccttctcctagttacaggc
tctcgtatcgctagctggttgcccagtttttcagtggaagtgatgcacactactaatatc
ctgggtattgcgcaagcgagcaactcacagctcaatgctatggctcatcagattcaagag
atgttccctcaggttccttaccatatagttctacaggatctgcagctgacacgctcagta
gaaataacaactgacaacatattagaggggcgcatccaggtacctttcccaacacagcgt
ccagacagtgttagacctgcgacaaacagtccagtggaaaggcataattcggatcaggag
gaagcagaaactgctacccagacggagagagtgccacttgaactcagtccgagactggaa
gagatggtggagttcagtgaaatggaagcagagcccagtgagacagaagattttgaggcc
agaggaagtcgcttctccaagtcagctgatgaaaggcagcgtatgttagttcagcggaag
gaagacctgctgcagcaagctcgcgagcgttatttaaacaaaacctccgacgaggactcc
atctccgagagcccctttctgtctgagggtgctgcctctgaccccgtcaccgtgcgccgc
agaatgttagccgctgctgccgaacggagactgcaaatgcaacagacctcgtag
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