Chrysemys picta (western painted turtle): 101939110
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Entry
101939110 CDS
T04662
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpic03400
]
101939110 (SMC5)
DNA repair and recombination proteins [BR:
cpic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
101939110 (SMC5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
FtsK_SpoIIIE
AAA_21
Rab11-FIP3
BLOC1_2
AAA_29
ATG16
AAA_25
FKBP15
Motif
Other DBs
NCBI-GeneID:
101939110
NCBI-ProteinID:
XP_005297832
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Position
7:complement(29118162..29197926)
Genome browser
AA seq
1079 aa
AA seq
DB search
MAAPGKRKLGAATSGSGAGWSKRGSGAAGPEGSGREQPQSPFVEGSIVRVTMENFLTYDN
CEVSPGPHLNMIVGANGTGKSSIVCAICLGLAGKPSFIGRADKVGLYVKRGCSKGLVEIE
LFKTPKNLVIKREIHVANNASVWFVNKKPSTLKIVEEQIAALNIQVGNLCQFLPQDKVGE
FAKLSKTELLEATEKSVGPPEMYQFHCELKNFRERERELENSLQEKTNFLEKMKQRNERY
KQDVERYYERKRHLDLIEMLERKRPWVEYENVRQQHEEVKQNRDHAKEELKKLQQAKSPM
TQQIQEVEKQWRNLDIKIKEKTAEIKDTSQRCKQKQDAVEKKDKQIEEIQQALRMKSDEE
MDRQKRIHNARKMIEDWQNELNSTGNSENLQPQIDSINNELRQLQEEKANIDGEMSDLRR
ERENLEREKKRVTDRIVQFNNMMNQKEDKLRGRYRDTHNALLWLRENKDRFKRSVCEPMM
LAINMKDNRHAKYVENHISVNDMRAFVFESQEDMEIFLREVRDHQKLKVNAVCAPTESCA
ENRPSRSVEELHQYGVFSYLRELFDAPHPVMSYLCSQYRVHDVPVGTEKTRSMIERVIQE
TKFKQIYTAEERYSVKVSAYTNQTISSNTSLRPAQFLTVTVDADERRQLENQLKDINRHF
QLRDSQLHTLYERQKGLERKDNELRQQKKERLERKNKRKQLESKISMKHDSLKQMEQDAI
NLEEESQQTNARIKEINVQKAKLVTELMQLIKNCITLNILKVDLVLQSTTVNSKKNRLES
DYKAATVQLRALEQQVSDLGEKKRVLLEKCKGLMRKARQACNLSPDQEIPKDFQTAFQDL
PSTLDEIDALLNEEKSRASCFTGLNASVVEEYNRRAQEIQQVTEELEEKKNELESYRQNI
SQVKERWLTPLKQLVEQINEKFSNFFSSMQCAGEVDLHTENEEEYDKYGIRIRVKFRSNT
QLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMVVKTA
CKESTSQYFFITPKLLQNLTYAEKMTVLFVYNGPFMLEPTKWNLKAFRKRRRQVEQMDQ
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccgggcaaacggaaactcggggccgccactagcggcagcggcgccgggtgg
agtaagcgaggctcgggggctgccgggccagagggaagcggccgggagcagccgcagtcg
cccttcgtggagggctctatagtcagggtcactatggagaatttcctaacatatgataat
tgtgaagtatctccaggaccccatttgaacatgatagtaggagctaatggaacaggaaag
tcaagcattgtttgtgccatttgtctgggattggcaggaaaaccttctttcatagggcgt
gcagacaaggtaggcctgtatgtaaagcgagggtgctcaaaaggcttggttgaaattgaa
ctgtttaagactcctaaaaatctcgttatcaaacgtgagattcatgtagcaaacaatgca
tcagtgtggtttgtcaataaaaagccttcaaccctgaaaatagtagaggagcagattgca
gccttaaatatccaagtgggcaatctgtgccagtttcttcctcaggacaaagttggggaa
tttgcaaaactgtccaagactgagcttcttgaagctacagagaaatcagttggcccacca
gaaatgtaccaattccactgtgaactaaaaaacttcagagagagagagagagaacttgag
aattcattgcaagagaaaactaatttcttggagaaaatgaagcaaagaaatgaacggtat
aaacaagatgtggagagatactatgaacgcaagcgtcatctagatttaatagagatgctt
gagagaaaaagaccgtgggtggaatatgaaaacgttcgccaacagcatgaggaggtgaaa
caaaaccgtgaccatgcaaaggaagaattaaaaaaactacaacaagcaaagtctccaatg
acacagcaaatccaagaagttgaaaagcagtggaggaatttggatataaaaatcaaagag
aagactgctgaaatcaaagacacttctcaaagatgtaaacaaaaacaagatgctgtggaa
aagaaagacaaacaaattgaagaaattcagcaagctttgagaatgaaaagcgatgaagaa
atggatcgacagaagagaatacacaacgctcgtaagatgatagaggactggcagaatgag
ctcaacagtacaggaaactctgagaatcttcaaccacagattgattctattaacaatgag
ctgagacagttgcaagaagaaaaggcaaatattgatggtgaaatgagtgatctgcgaaga
gagagagagaacctagagagggaaaagaaaagagtaactgatcgcattgtacaatttaac
aatatgatgaatcagaaggaagataagctcagagggagataccgagacacacacaatgct
cttctgtggctaagggagaacaaagaccgatttaaaagaagtgtctgtgaacccatgatg
cttgcaataaacatgaaagacaatagacatgctaaatatgttgaaaatcacatttcagta
aatgatatgagggcctttgtttttgaaagtcaagaagacatggaaatatttcttcgggag
gtgcgtgaccatcagaaattaaaagttaatgctgtatgtgcacccactgagtcatgtgct
gaaaatagaccttcaagatcagttgaagagttgcaccaatatggtgttttctcttattta
cgagagttatttgatgctcctcatcctgtgatgagttacctttgttcccagtatcgtgtt
catgatgtccctgtgggaactgagaagaccagaagcatgattgaaagggtcatacaagaa
accaaatttaaacaaatctacacagcagaagaaaggtattcagtgaaagtgtctgcttat
acaaatcaaactatttctagtaacacatcactgagaccagcgcagtttctcactgtcaca
gtagatgcagatgaaagaaggcagttggaaaaccaactaaaggatattaatagacatttc
cagttacgagattctcaattgcatacattatatgagaggcagaagggtctggaacgcaaa
gataatgagctgagacagcaaaagaaggaacgtttggagagaaaaaacaaaaggaaacaa
ctggaatcaaaaattagtatgaaacacgatagtttgaaacagatggagcaagatgccatc
aatctagaagaggagtctcaacaaacaaatgccaggatcaaagaaattaatgtccaaaaa
gcaaaacttgttacagaattaatgcaactcataaagaattgcataacactgaacatcctc
aaagtggatttggttcttcagagcactacagtgaattccaagaagaatagactagaatct
gattataaagcagcaaccgtacaactaagagctttagagcaacaagtttctgacttgggt
gaaaaaaaacgtgttcttttggagaagtgcaagggactgatgagaaaagctagacaggcg
tgtaatctcagccctgatcaagaaattccaaaagactttcagactgcattccaggacctt
ccaagcacattggatgaaattgatgctttactgaatgaagagaaatcaagagcctcctgc
ttcacaggcctaaatgcttcagttgttgaagaatataatagaagggcacaagaaatacag
caagtaacggaggaactagaggaaaagaaaaacgaattggagagctataggcaaaacatt
tcacaggttaaagaaaggtggctaacacctttgaaacagctggttgaacaaattaatgaa
aagttcagtaatttttttagttctatgcagtgtgctggtgaagttgatcttcatacagaa
aatgaggaggagtacgacaaatatgggattcgaattagagttaaatttcgtagtaatacc
caactgcatgaactgactcctcaccatcagagtggaggtgagagaagtgtttcgactatg
ctgtacttgatggctctgcaggaactcaacagatgtcctttcagggttgtggatgaaata
aatcagggaatggaccccgtcaatgagaggagagtttttgaaatggttgtgaagactgct
tgtaaagagagcacttctcagtatttctttattacaccaaagctcctgcagaatctcacc
tatgctgaaaaaatgacagtgttgtttgtctacaatggaccttttatgctagaaccaacc
aaatggaacttaaaggcattccgtaagcggcgacgacaagttgagcaaatggatcagtag
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