Chrysemys picta (western painted turtle): 101939313
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Entry
101939313 CDS
T04662
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpic04131
]
101939313 (VPS50)
Membrane trafficking [BR:
cpic04131
]
Protein recycling
Others
EARP complex
101939313 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DcpS_C
Motif
Other DBs
NCBI-GeneID:
101939313
NCBI-ProteinID:
XP_005308601
UniProt:
A0A8C3IMV7
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All DBs
Position
2:complement(12069316..12243639)
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AA seq
983 aa
AA seq
DB search
MQKIKSLMARQGLKSPQENVHDLSPVENFRIPSKEELRELREQPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELEKLPPVLSLQEMEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNS
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDRDEGTVSSSV
SDGNNVIGAEETNFDRSYVQKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLD
IISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTTITLFEQYCNEGNPFEIQVNSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTSSSLPTSSREQYSARQFESTGLGLSSNRLRTTLNRIQESLIDLEVSTDTTGTLTAAEE
RKEKVPSPHLSHLVVLTSGNTLYGLAERVVATESLVFLAEQFEFLQSHLDAVMPAAKKPF
LQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLK
EFEQFNRRLNEVSKRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDF
QQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLG
SHINKKARQKLLAAIDDLDRPKR
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtcactgatggctcgccagggtctcaaaagtccacaggagaacgtt
catgacctcagtcctgttgagaattttcggattcctagcaaggaggagctgagagaactc
cgggaacaaccaaccgatcctcaagcccagcaagaaataattaacagcattgaagaagtg
tatttttccaatgattcctttgatattgtgaagtatgagttggagaaacttcctccagtt
cttagtcttcaagaaatggaagaatacagagacaaattaaagcaacaacaagctgctgta
tctaaaaaggttgcagacttgattcttgaaaagcagcctgcatatgttaaggaacttgaa
cgagttacatctttacaaactggtcttcagttagctgcagtcatttgcacaaatggaaga
agacacctgaatattgcaaaggaaggctttactcaagccagtttgggacttcttgcaaat
caaagaaaacgacagttgctgattggactgctaaagtctctgagaacaataaaaacactg
caaagaactgatgtacgtttaagtgaaatgttggaggaggaggactatccaggagctatt
caattgtgcttggaatgccagaaagcagccagtactttcaaacactacagttgtataagt
gaattgaattcaaaactgcaagacactttggaacaaatagaggaacaattagatgtagcc
ctctccaaaatatgcaagaactttgatatcaatcattataccaaggtgcagcaggcttac
agactacttggaaagacacagacagcgatggaccaactacatatgcacttcactcaagcc
attcacaacacagtgtttcaagtagttcttgggtacgtagagctgtgcgcaggaaactcg
gacaccaagtttcagaagctacagtacaaggacctctgcacacatattacatcagacagc
tacattccatgtcttgctgacctctgcaaagcactctgggaagtcatgctcagttattat
cgaacaatggaatggcatgagaaacatgaccgagatgagggaactgtttcatcttctgtt
tcagatggcaacaatgtgattggagctgaggagactaattttgaccgtagctatgtacaa
aagaaattagaacatggactttcacgaatatggcaggatgtgcagctgaaagtgaaaacg
tatctgctgggaacagacatgtctaacttcaaatatgatgactttatctttgtactagat
atcattagcaggttgatgcaagttggggaagaattttgtggcagtaagtcagaagttttg
caagaatccattagaaaacaaagtgttaactatttcaagaattatcacagaactcgtctt
gaagaattgcgaatgttcttggagaacgagacctgggagctttgtcctgttaagtcaagc
tttagtattttacaacttcatgagtttaaattcatggagcagtcacgttccccgtctgtg
tcgcctagtaagcagcctgcttcagcaatctcaacaaccataactttgtttgagcaatat
tgtaatgaaggaaatccatttgaaattcaggtcaacagcaaagatgatgagacagaagat
gtacttgcttctaatgggtatgaatctgatgaacaggagaagagtgcctatcaagagtat
gacagtgacagtgatgttcctgaggagctgaaaagagattatgtggatgagcagacagga
gatgcccctgtaaaaagtgtttctcgagaaaccctgaggagcaggaagcgatcagattat
aatctcaacaaggtgaatgcacccatcctaacaaacactacactgaatgtaataagactc
gttgggaaatacatgcagatgatgaacattctgaaaccaattgcatttgatgtgattcac
ttcatgtcccagctgtttgattactatctgtatgcagtgtatacgttttttggccgaaat
gacacgagttcttcacttcccacatctagcagggaacagtacagtgctaggcagtttgaa
tcaacaggactgggtcttagtagtaacaggctgcgcactacgctaaacaggatacaggag
agcctgattgatctggaggtctctactgataccactggcaccctcacagctgctgaagag
agaaaggagaaagtgccaagcccacacctcagtcatcttgtagttttaacatctggcaat
actctgtatggtttggcagagagagtggtagccacagaatccttggtgtttttggctgag
cagtttgagttccttcagtcgcatcttgatgctgtgatgcctgcagccaagaaacccttt
ctccagcaattctactctcagacggtgtcaactgccagtgaactacgcaaaccaatttat
tggattgtagctgctaaagctattgattatgaacagatgctgctcctcatggctaatgtg
aagtgggatgtgaaagagatcatgtcacaacacaatgtctatgttgatgctcttttaaag
gaatttgaacagtttaacagaaggttgaatgaggtgtctaaaagagtccgtattccattg
ccagtgtcaaatattctttgggagcattgtatacgactagccaatagaactattgtggaa
ggttatgccaatgtcaagaagtgtagcaatgaagggcgtgccctgatgcaattggacttc
cagcagtttttaatgaaactagaaaagctaacagacattagacctattccggataaggaa
ttcgtggagacctacattaaagcttactatctgactgaaaatgacatggagcgctggatc
aaggagcacagggaatattccaccaagcagttgaccaatctggtgaatgtttgtctggga
tcacacatcaacaaaaaagcaagacagaaactgctagcagcaattgatgacctagacaga
cctaaaagataa
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