Chrysemys picta (western painted turtle): 101939472
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Entry
101939472 CDS
T04662
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X2
KO
K13217
pre-mRNA-processing factor 39
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpic03041
]
101939472 (PRPF39)
Spliceosome [BR:
cpic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101939472 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_12
TPR_19
TPR_16
TPR_MalT
FAT
Motif
Other DBs
NCBI-GeneID:
101939472
NCBI-ProteinID:
XP_005303477
UniProt:
A0A8C3HNJ1
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MQGPLRFEDQDSARGDQNIAMFYPTSTQMVYRRGLQAIPLSVDLWIHYINFLKETLDPVD
PETNNTVRGAYEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYS
HHFQRFKEHVQNNLPRDLLTPEQFIQLRRELASVSGHSGDDAPPGDDLPSGIEDITDPAK
LITEIENMRHRIQEIHQEMFNHNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLE
FEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLPKKP
MVHMLWAAFEEQQGNINEARRILKTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQEA
VKNAKSSGESSFYAIKLARHLFKVQKNLPKARKVLLEAIEKDKENTKLYLNLLEMEYSGD
LKQNEENILTCFDKAVNGALSIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQTLLKEQ
DSLKRKAENGSEEPDEKKAHTDDATLASTQMMDGDMQANQVAYNYNAWYQYNYQNAWNYG
QYYAPPPT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaccgctgcgctttgaagatcaagactctgcacgtggagatcagaacattgcc
atgttctatccaacctccacccaaatggtgtatcggagagggctacaggcaatacctctt
agtgttgatctttggatacattatataaacttcttaaaagagacactggatcctgttgac
cctgaaactaataataccgtaagaggagcctatgaacatgcagtcttagctgcagggaca
gatttccgctctgacagactatgggaaatgtatataaattgggaaaatgaacagggcaac
ctacgagaagttacagctatatatgatcgtatcctggggattcccacgcagctctatagc
catcacttccagaggtttaaagaacacgtacaaaataatttgcctcgagaccttctaact
cctgagcagtttattcagctgcgccgggaattggcgtctgtcagtggccatagtggggat
gatgcaccaccaggagatgaccttccttctggaattgaggacataactgaccctgcaaag
ctaatcactgaaatagaaaacatgagacacagaatccaagagattcatcaagaaatgttc
aatcacaatgaacatgaagtcagcaagaggtggacctttgaagaaggaataaaacgacct
tacttccatgtaaaacctttggagaaagcccagttgaaaaactggaaagaatacttagag
tttgagatagaaaatgggactcatgagcgagttgtggtcctctttgaaagatgtgttatt
tcatgtgccctctatgaggacttctggattaagtatgccaagtatatggagaatcacagt
attgaaggagtgagacatgtctacagcagggcctgtacaatacaccttcctaagaaacca
atggttcatatgctatgggctgcctttgaagaacagcaggggaacatcaatgaagcaaga
agaattttgaaaacatttgaagagtgtgttctgggacttgcaatggttcgcttgcgaaga
gttagcttagaacgccgacatggaaacatggaagaagctgaacacctgcttcaggaagct
gttaagaatgctaaatcaagcggtgaatcatcattttatgccatcaaactagctcgacat
cttttcaaagttcagaagaaccttccaaaagcaagaaaagtgctattggaagccattgag
aaagacaaagagaacactaaattgtatctcaacttacttgaaatggagtatagtggggat
cttaagcaaaatgaagaaaacatcctcacatgttttgacaaagctgtcaatggtgcattg
tctataaaaatgaggattacattttctcaacgaaaagtggaatttctggaagattttggt
tctgacgtcaacaagcttttggatgcctatgatgaacatcaaacacttctaaaagagcag
gattctttaaaaaggaaagcagaaaatggctcggaggaaccagatgagaagaaagcacat
acagatgatgcgacattggcatctactcaaatgatggatggagacatgcaagctaatcag
gttgcatataattataatgcatggtatcagtacaactaccagaatgcatggaattacgga
cagtattatgccccccctccaacctga
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