Chrysemys picta (western painted turtle): 101939767
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Entry
101939767 CDS
T04662
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101939767 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpic04131
]
101939767 (RABGEF1)
Membrane trafficking [BR:
cpic04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101939767 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
101939767 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
DUF1639
Bac_RepA_C
ZW10_C
DAXX_hist_bd
Motif
Other DBs
NCBI-GeneID:
101939767
NCBI-ProteinID:
XP_008177099
UniProt:
A0A8C3HMN9
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MRADAGAGALPNRPEGRSVAFAGGAAGAGLRRRRRPGEPEEMSLKSERRGIHVDQSELLC
KKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQDDWELAERLQREEEEAYASSQSTQGAQ
SLTFSKFEEKKTNEKTRKVTTVKKFFSASSRTGAKKAAQERNLKQGQLGRERNADNILRD
LKEIFTPSWELASPTEGNTAQLGELSACSMLAGRLRAEIHEAKAPSPSINRQVSIETDRA
SKEFIEFLKTYHKSGQEIYKQCKMFLEAMHHKRELSIEEQSECAQDFYQNIGEKLQTRSK
VSPEKVEKTMDQIEKYIMTRLYKYVFCPETTDDEKKDLVVQKRIRALHWVTPQMLCVPVN
EEISEVSDMVVKAITDIIEMDSKRVPRDKLACITQCSKHIFNAIKITKNEPASADDFLPT
LIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQ
EDFDRYMSGQTSPKKQESENWSSDVCLGVKQMYKNLDLLSQLNERQERIVSEAKKLEKDL
IDWTDGITKEVQDIVEKYPLEINPKNQPLAAIDSENVENDKLPPPLQPQVYAG
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgacgcaggggccggggccctgccgaaccggcctgaagggaggagcgtcgcg
ttcgcaggcggcgcagctggagcggggctgagacgccgccgccgcccgggagagccggaa
gaaatgagcctaaagtctgaacgcagaggaattcacgttgatcagtcagagctactgtgc
aagaaaggatgtggttactatggaaaccctgcttggcagggcttctgctccaagtgctgg
agagaagagtaccataaggcaaggcagaaacagattcaggatgactgggagctggccgag
cgacttcagcgtgaggaggaagaagcctatgctagtagtcagagtacacaaggggcacag
tcgctcaccttttccaagtttgaggaaaagaaaaccaatgaaaagacacgcaaggtgaca
actgtgaagaaattcttcagtgcgtcttccaggacaggagctaagaaggctgctcaagag
agaaaccttaagcaaggacagcttgggagggagcgaaatgctgataacattctcagggac
ttgaaggagatttttactccctcctgggagctggcttcccctactgaaggtaacacagca
cagcttggagagctgtctgcttgttctatgttggctggcagactgagagcggagattcat
gaagctaaggctcctagcccttcaataaacaggcaggtcagcattgagacagatcgagcg
tccaaggagtttatagagtttctcaagacctatcataaatctggtcaagaaatttataag
cagtgcaaaatgtttttggaagcaatgcatcacaaaagggaattaagtattgaggaacaa
tctgaatgtgcccaggacttctatcaaaacataggagagaaattacagacccgttcaaaa
gtttccccagaaaaagttgagaaaacaatggaccagattgaaaaatatatcatgactcga
ttgtataaatatgtgttctgccccgaaacaactgatgatgagaagaaagatctggttgtc
caaaagagaatcagggctttacactgggtaactccacaaatgctgtgtgttcctgttaat
gaagaaatttcagaagtctccgatatggttgtgaaagcaattacagatattatcgaaatg
gattcaaaacgtgtccctcgtgataaattagcatgcatcacccaatgcagcaaacatatc
ttcaacgctataaaaatcacaaaaaacgaaccagcttctgctgatgacttcttaccaaca
ctcatatatattgttttgaagggaaacccaccccgtctgcagtccaacatccagtatata
acccgcttctgtaatccaagcaggttaatgactggagaggatggctactattttaccaat
ctgtgctgtgctgtggccttcattgaaaagctggacgctcaatctttaaatctaagccag
gaggattttgatcgctacatgtcgggccaaacgtctccaaagaaacaagaatctgaaaac
tggtcatctgatgtgtgcctaggtgttaaacagatgtataaaaacttagacctcctctct
caattgaatgagagacaggaaagaattgtcagtgaagccaagaagcttgagaaagacctt
atagattggactgacggaattactaaggaagtccaagatattgttgaaaaatatccattg
gaaataaatccaaaaaatcaacccttagcagctattgactctgaaaacgtagagaatgac
aaattgcccccaccactgcagcctcaggtttatgctggatga
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