Chrysemys picta (western painted turtle): 101940037
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Entry
101940037 CDS
T04662
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpic03021
]
101940037 (SUPT6H)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101940037 (SUPT6H)
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101940037 (SUPT6H)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
101940037 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
DUF6656
Motif
Other DBs
NCBI-GeneID:
101940037
NCBI-ProteinID:
XP_005298319
UniProt:
A0A8C3I5I4
LinkDB
All DBs
Position
Unknown
AA seq
1722 aa
AA seq
DB search
MSDFVESEAEESEEEYNDDGEVVPRANKKFVEEEDDEEEEEENLDDQDEQGNLKGFINDD
DDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRK
MSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVDAPIAPPEEEEEDEEDESDID
DFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYEY
EDEEAEGEIRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRVTDMPERFQLRS
IPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKEA
LNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQA
YQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAA
KASRKKHKRIREDGEEAEGEGEDAEDEEQKGPELKQASRRDMYTICQTAGLDGLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPL
VRQVLRQTFQERAKLNIAPTKKGKKDVDEAHYAYSCKYLKNKPVKELRDDQFLKICLAEE
EGLLSIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFL
YVQMAKELKNKLMVEAKEYVIKACSRKLYNWLKVSPYRPDQQVEEDDDFMDENQGKGIRV
LGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEERDKKAQDIETLKKFLL
NKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSRKSEN
EFRDYPPVLRQAVSLARRIQDPLIEFSQVCSSDEDILCLKLHPLQEHVVKEELLNALYCE
FINRVNEVGVDVNRAIAHPYSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMC
HMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPY
RSPNTEEVFNMLTKETPETFYIGKMITCNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGM
TVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDAEAADHKQEEDYKRKQQ
RTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHV
DVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLSHKYYQDCSGGDRK
KLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIF
PTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSY
SYTTPSQPITTPQYHQLQASTTPQSTQSQPSSSSRQRQQPKSNSHAAIDWGKMAEQWLQE
KEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggagagcgaggctgaggagtcggaggaggaatacaacgacgatggg
gaggttgttccgagagcaaacaagaagtttgtagaagaggaagatgatgaggaggaggag
gaggagaatcttgatgatcaagatgagcaggggaacctaaagggattcattaatgatgat
gatgatgaggaagaggaggaggaggaagaggcaagtgactctggcgattcggaggacgat
gttggccacaaaaagagaaaacgcactttcgatgaccgtctggaggatgacgattttgac
ctcattgaagagaacttgggtgtcaaagtcaaaagacaaaaattcaggcgtgtgcgaaaa
atgtcagatgatgaggatgatgaagaggaggattatgggaaggaggaacacgagaaggaa
gccattgctgaagaaatcttccaggatggggaaggggaagaggggggcgaggctgtcgat
gctcccatagctcctccagaagaggaggaagaggacgaggaagatgaatctgacattgac
gacttcattgtggatgatgatgggcaacctctgaagaagccaaagtggcggaagaagctc
cctggctacacagatgccgctttgcaagaggctcaggagatcttcggagtggactttgac
tatgatgaatttgagaagtacaatgagtatgatgaggagctggaggaggaatatgagtac
gaggatgaggaggccgaaggggagatccgcgtccgacccaaaaagactgccaagaagcgc
gtcagtcgacgaagcatctttgagatgtacgagcccagtgagctggagagcagtcacctg
acagaccaggacaatgagatccgcgtgaccgacatgccagagaggttccagctgcgctcc
atccctgtgaagagtgctgaagatgatgagttggaggaggaagctgactggatctacagg
aatgcctttgccacacctaccatctccctgcaggaaagttctgattacttggaccggggc
caggccagtagcagcttcagccgcaaggggcccagcaccatacagaagattaaagaagcc
ctgaacttcatgaggaatcagcacttcgaggtcccattcatcgccttctaccgaaaggag
tacgtcgagccggagctgcacatcaatgacctctggagggtctggcagtgggatgagaag
tggacccagctgaagatccgcaagcagaacctgacccgtctgtttgagaagatgcaggcc
tatcagtacgagcaaatctctgctgatccggacaaacctttggctgatgggataagggcg
cttgataccactgacatggagaggctgaaggacgtgcagtccatggatgagctgaaggac
gtgtataaccatttcttgctgtactacgggcgagacatccccaagatgcagaatgctgcc
aaagccagccgaaagaagcacaagcgaatccgggaggatggtgaagaggcggaaggtgaa
ggagaggatgcagaagatgaagagcagaaggggcccgagctgaagcaggcatcccgcagg
gatatgtacaccatctgtcaaaccgctgggctggatggcctggctaagaagtttggtctg
acgcctgagcagtttggagagaatcttcgggacagttaccagcgtcatgagacggagcag
ttcccagcagagccgctggagctggccaaggattacgtgtgtagtcaattcccaacccct
gaggctgtgctggaaggagcccgctacatggtggccttgcagatagcccgagagccgctc
gtcaggcaggtcttgagacagactttccaagagagagccaaactcaacattgcaccgacc
aagaagggtaaaaaggacgttgatgaagcccactatgcatattcttgtaagtacctgaag
aacaagcccgtgaaggagctgcgagatgaccagtttctgaaaatctgcctggctgaggag
gaggggctgctgagcatcgacatcagtattgacatgaaaggcgttgagggttatgggagt
gaccagacgtattttgaggaaatcaagcagttctattaccgcgacgagttcagccaccag
gtgcaggagtggaatcgtcagcgcacgatggccatcgagcgttccctcaaccagttcctc
tatgtgcagatggctaaagagctgaagaacaagctgatggtggaggccaaagagtacgtc
attaaggcttgcagccggaagctgtacaactggctaaaggtgtctccctaccggccagac
cagcaggtggaggaagacgatgatttcatggatgaaaatcaggggaagggaattcgggtg
ctgggcattgcattctcctctgccagagaccaccccgtgttctgtgccctggttaatggt
gaaggcgaggttacagacttcctccggctgccgcacttcaccaagagacggaacgcctgg
cgggaggaggagcgggacaagaaggcccaggatatcgaaactctgaaaaaattccttctg
aacaagaagcctcatgtggtgacaattgcaggagagaacagggatgcccagatgttgatg
gaggacgtcaagcggattgtgcatgaactggatcaagggcagcagctgtcttccattggg
gtggagctagtggacaatgagctggccattctctacatgaacagcaggaagtcagagaac
gagttccgggattacccccctgtgttgcgccaagccgtctccctggctcgccgcattcag
gaccccctgatagagttttctcaggtctgcagctctgatgaggatatcctgtgtctgaag
cttcaccctctgcaggaacatgtggtgaaggaggagctgctgaatgccctctactgcgag
ttcataaaccgtgtgaatgaggtgggcgtggacgtcaatcgggcaattgctcacccttac
agccaggccctgctacagtatgtttgtggcctggggccacgcaaagggactcacctgctc
aagatcctgaaacaaaacaacacaaggctggagaaccggacgcagctagtcaccatgtgt
cacatgggacccaaggtcttcatcaattgtgctggtttcatcaaaatcgacacagcatcg
ctgggtgacagcacggattcctacattgaggtcctagatgggtccagagtccaccctgaa
acctatgaatgggcaagaaaaatggcagtggatgccctggagtacgacgaatccgcagag
gatgccaatccagctggagctctagaggagatcctggaaaacccagagcgtctgaaagac
ctggatcttgacgcctttgctgaagagctggagagacagggttacggtgacaaacacatc
actctgtacgacatccgagctgagctgagctgcagatacaaggatctgagaaccccgtac
cgttctcctaacacagaggaggtcttcaatatgctgaccaaagaaacaccagagactttc
tacataggcaaaatgatcacctgcaacgtgactggtatagcccataggagaccccaaggc
gaaagctacgatcaggccatacggaatgacgagactggcctctggcaatgtcccttctgt
cagcaggataacttcccagagctcagcgaggtttggaatcactttgacagtggctcctgc
cctggccaggctattggggtgaagacacggctggacaacggggtcactggctttatacca
accaagtttctcagcgacaaggtggttaagcggccagaagaaagggtgaaggtgggaatg
actgttcactgtaggatcatgaagatagacattgagaagttcagtgcagacctgacctgc
aggacgtcagacttgatggataagaacaatgaatggaagctacccaaagacacttactat
gacttcgatgctgaggcagcagatcacaaacaggaagaagactacaagaggaagcagcaa
cgcacaacatacatcaagagggtgatcgctcacccgtcattccataacatcagcttcaag
caagccgagaagatgatggagaccatggaccaaggggacgtgatcatccggccaagcagc
aagggggagaaccacctgactgtcacctggaaggtgaacgatgggatttaccaacatgtg
gatgtccgagaggagggcaaggagaacgccttcagtttgggctccaccctttggattaac
accgaggaattcgaggacctggatgaaatcgtcgctcgctatgtccagccaatggcgtct
tttgctcgagacctgctaagtcacaaatactaccaagactgcagtggcggagacaggaag
aaactggaagaacttctaataaagaccaagaaggagaagccaacctttattccttacttt
atctgtgcctgtaaagagctacctggcaaattccttctgggataccagcctcgagggaag
ccaaggatagagtatgtgacggtaacaccagagggattccgataccggggacagatcttc
cctaccgtcaacgggctcttccggtggtttaaggatcattatcaggacccagtgccaggt
atcaccccgagcagcagcagcaggacccggaccccagcctccatcaatgctactcccgct
aacattaacctagcggatctgacccgtgccgtgaacgcgctgcctcagaacatgacctcg
cagatgttcagtgccatcgccgcggtgacgggccaagggcagaaccccaatgccacgcct
gcacagtgggcatccagccagtatggctatggaggcagcggagggggcagcagtgcatat
catgtctttacaactccagcacagcagccagtggccacccctctgatgacccccagctac
tcctacacgacccccagccaaccaattacaacaccgcagtatcatcagctccaggccagt
actacaccccagtccacccagtcgcagccatcatccagttccagacagaggcagcagccg
aagtccaacagccatgctgcaatcgattgggggaaaatggccgagcagtggctacaggag
aaggaggctgagcggaggaaacagaaacagaggctgacccctcgtccatctcccagcccc
atgattgagagcacacccatgtccattgctggggacgccacaccacttctggatgaaatg
gatcgatag
DBGET
integrated database retrieval system
