Chrysemys picta (western painted turtle): 101940156
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Entry
101940156 CDS
T04662
Symbol
FXR1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101940156 (FXR1)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101940156 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
101940156 (FXR1)
mRNA cycle factors
Stress granule specific factors
101940156 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
101940156
NCBI-ProteinID:
XP_005286030
UniProt:
A0A8C3EYF5
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All DBs
Position
9:90143808..90210074
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AA seq
678 aa
AA seq
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MEELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIG
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
VKKNTFFKCTVDVPEDLRDACANENAHKDFKKAVGACRIFYHAETTQLIILSASESTVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELEEDTGTFRIYGESADAVKKARSYLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKENIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGMGFRPSSTRGPEKEKGYTTDESTLSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRESRHQRDSRRRPGGRGRSVSG
GRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTVDTDASESHHSTNRRRRSRRRRT
DEDAVLMDGMTESDTASVNENGLDDSDKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRA
ESQSRQRNLPRETLAKTKNEMAKDVIEEHGPSEKAINGPANASADEPSKPQPSPEEEKSS
TIQEEENNQEEAVLNGVS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgaccgtggaagtgcgcggctccaacggggccttctacaagggatttatc
aaagatgtccatgaggattcactcacagttgtatttgaaaacaattggcaaccagagcga
caggttccttttaatgaagtcagattaccacctccacctgatatcaagaaagaaatagga
gaaggagatgaagtggaggtttactcaagagcaaatgaccaagaaccttgtggctggtgg
ctggcaaaagttcgaatgatgaaaggagagttttatgtcattgaatatgctgcttgtgat
gccacgtacaatgagatagtcacatttgaacgacttcgacctgtgaatcaaaataaaacg
gtcaaaaagaacacgttctttaagtgcacagtggatgttcctgaagatctgagagatgcg
tgcgctaatgaaaatgcacataaggattttaagaaagctgtaggagcttgtcgaattttc
taccatgctgaaactacgcagttaataatactgtctgccagcgaatcaacagtgaagaga
gtaaatatattgagtgacatgcatttgcgcagcattcgtaccaagctaatgctcatgtca
agaaatgaagaagccacaaaacacttagaatgcacaaaacaacttgcagcagcatttcat
gaggaatttgttgtaagagaagatttaatgggacttgcaataggaacacatggtagtaac
atacagcaagcgaggaaagttccaggagtaactgcaattgagcttgaggaagatactggt
actttcaggatctatggagagagtgctgatgcagtaaaaaaggctagaagttacttggaa
tttgtggaagattttattcaggttcccagaaatcttgttggaaaagttattggaaaaaat
ggaaaagtgattcaggagattgtagacaagtctggagtcgtccgggtgaggattgaaggg
gacaatgaaaacaaactgcccagagaagatggaatggtcccattcgtatttgttggcact
aaagaaaacattggaaatgtccaagttcttttagaataccatattgcctacctgaaggaa
gtagaacagctaaggatggagaggctccagattgatgaacaactgcgtcagattggtatg
ggtttcagaccttcttccaccagaggtcctgaaaaggaaaaggggtacactactgatgag
agtactctctcctcagtacaagggtccaggtcatatagtggaagagggagaggtcgcaga
ggccccaattatacatctggttatggtacaaactctgagctgtctaatccctccgaaacg
gaatctgagagaaaagatgaactgagcgattggtcactggcaggagaagatgaccgggag
agccgacatcagcgggacagcagaagacgtcctggaggaagaggacgtagtgtttctggg
ggtcgtggacgtggtggaccacgtggtgggaagtcatccattagctctgtgcttaaagat
ccggacagcaacccttacagcttacttgataacacagagtcagaccagactgtggacact
gatgccagtgaatctcatcacagtactaaccgtcgtaggcggtcacgcaggcgaaggact
gatgaagatgctgttctgatggatggaatgacggaatctgacactgcttctgttaatgag
aatggcttagatgatagtgacaaaaaaccccagcgacgcaatcgtagccgcaggcgtcgc
ttcaggggtcaggcagaagatagacagccagtcacagtagctgattacatatcgcgagct
gaatctcagagtagacaaagaaacctcccaagggaaacattggccaaaaccaagaacgaa
atggcaaaagatgtgattgaagaacatggcccttcagaaaaagcaataaatggccctgct
aatgcatctgcggacgaaccttctaagccacagcctagccctgaagaagagaagtcaagt
actatacaagaagaagaaaataatcaggaagaagcagtgctgaatggtgtttcataa
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