Chrysemys picta (western painted turtle): 101940388
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Entry
101940388 CDS
T04662
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101940388 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpic03041
]
101940388 (DHX16)
Enzymes [BR:
cpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101940388 (DHX16)
Spliceosome [BR:
cpic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101940388 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
Flavi_DEAD
SecA_DEAD
nSTAND3
ATPase
T2SSE
Motif
Other DBs
NCBI-GeneID:
101940388
NCBI-ProteinID:
XP_008174074
UniProt:
A0A8C3P9R8
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MAALERWVSGELHALLGLSERHVVGFLLGLARRSRSPDELLNRLEETETLRVSEPAVRAF
AQRLWEQIPRSAPQERPARVAEREALALQQKNRSYQLLEDSEEEEGDGGAAPGSKRRPEQ
GKHKKRRKHLRRKPEEASEEENEAEREPEPSLEGKDSEDEWDRSERERLQDLEERDAFAE
RVKRKDKEKTRNILERSDKKAYEEAQKRLKMAEEDKKTMIPELRKKSRREYLAKRERDKL
EDLEAEIVDEEHLFSELELTTAEQRELEYKRRVRDLAKDYKRAGEQEKLEKSSRYYMPEE
SRGKKIPDRYEEPVADERATPRDEQRRWEEDHIGAAALRFGARDAGQRHPGKDYEFVLEE
DEMIHFVSAVHMQGTAQGKEEKSELSEVARRKLSMQEVRRSLPVYPYRQDLLAAIAEHQI
LIIEGETGSGKTTQIPQYLYEEGYTEKGMKIGCTQPRRVAAMSVAARVSQEMGVKLGNEV
GYSIRFEDCTSERTLLKYMTDGMLLREFLTEPDLSSYSVIIIDEAHERTLHTDILFGLIK
DIARFRPALKVLIASATLDTERFSTFFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACVV
SVLQIHVTQAPGDILVFLTGQEEIEACCEMLQERCRRLGSKIPELLVLPIYANLPSDMQA
KIFEPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMESLIVTPCSRA
SANQRAGRAGRVAAGKCFRLYTAWAYKNEMEETTVPEIQRTNLGNVVLLLKSLGINDLIH
FDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRKMAELPVDPMLSKMILASEQYKCS
EQILSIAAMLSVNNSIFYRPKDKVVHADNARMNFFLPGGDHLVLLNVYTQWVESAFSMQW
CYENFIQFRSMRRARDVREQLEGLMERIEVDLTSSEGDYVPIRKAITAGFFYHTARLTRT
GYKTVKHQQTVFVHPNSCLFEEQPRWLIYHELVFTTKEFMRQVIEIDSTWLLEVAPHYYK
AKELEDASAKKLPKKVGKTREELG
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggagcggtgggtgtcgggggagctgcacgcgctgctggggctgagcgag
cggcacgtggtcgggttcctgctcggcctggcccggcgcagccgcagccccgacgagctg
ctgaatcgcctggaggagacggagactctgcgcgtgagcgagccggccgtgcgcgccttc
gcccagcgcctctgggaacagatcccacgttcggccccccaggagcgtccggcccgggtg
gccgagcgggaggccctggccctgcagcagaagaaccgctcgtaccagctgctggaggac
agcgaggaggaggagggggatgggggggctgccccgggctccaagcgccggcccgagcag
gggaagcacaaaaagcggcgcaaacacctgcgccggaagccggaggaggcgtcggaggaa
gagaacgaagctgagcgggagccggagccatccttggaggggaaagactcagaggacgaa
tgggaccgcagcgagcgagagcgtctgcaggacttggaggagcgcgacgccttcgctgaa
cgggtcaagcgcaaggacaaggagaagaccaggaacatcctggagcgttcggacaagaag
gcctacgaagaggcgcagaagcgactgaagatggcagaagaagacaagaaaactatgatc
ccagagctgcggaagaagtcgcgccgggagtacctggccaagcgggagcgggacaagctg
gaggacctggaggcggagattgtggacgaggagcacttgttctcggagctggagctgacg
acggccgagcagcgggagctggagtacaagcgccgggtgcgcgacctggccaaggactac
aagcgggcgggcgagcaggagaagctggagaagagcagccgctactacatgcccgaggaa
agccgtggcaagaagatccccgaccgctatgaggagccggtggcggacgagcgcgccacg
ccgcgggatgagcagcggcgctgggaggaggatcacattggggcggctgccctgcgcttc
ggggcccgcgacgccggccagcgccaccccggcaaggactacgagtttgtgctggaggag
gacgagatgatccacttcgtcagcgctgtgcatatgcagggcacagcccagggcaaggag
gagaagtcggagctgtcagaggtggcgcggaggaagctgtccatgcaggaggtgcggcgc
agcctgcccgtctacccctaccgccaggacctgctggcggccatcgccgagcaccagatc
ctcatcatcgagggggagacgggctccggaaagaccacgcagatcccccagtacctgtac
gaggagggctacacggagaaggggatgaagattggctgcacccaacccagacgagtggcg
gccatgagcgtcgcggccagagtctctcaggaaatgggagttaagcttggtaacgaggtg
ggctacagcatccgctttgaggactgcacgtcggagcgcacgctgctcaagtacatgacg
gacggcatgctgctgcgggagttcctgaccgagcccgacctctccagctacagcgtgatc
atcatagacgaggcccatgagcgcaccctccacaccgacatcctgttcggcctgatcaag
gacatcgcccggttccgcccggcgctcaaggtgctgattgccagcgccacactggacacc
gagcgcttctccaccttcttcgacgacgcacccatcttccgcatccccgggcgccgcttc
cctgtggacatcttctacaccaaggcccccgaggccgattacctggaggcctgcgtggtg
tcggtgctgcagatccacgtcacccaggcgcccggcgacatcctggtcttcctcactggc
caggaggagattgaggcctgctgcgagatgctgcaggaacgctgccgccgcctgggctcc
aagatccccgagttgctggtgctgcccatctatgccaacctgccctctgacatgcaggcc
aagatcttcgagcccaccccacccggggcccggaaggtcgtcgtggcgactaacatcgca
gagacctcgctgactattgatgggatcatctacgtcatcgacccggggttctgcaagcaa
aagagctacaacgcccgcaccggcatggagtccctgatcgtcacaccctgctcccgggcc
tccgccaaccagcgggccgggcgcgctgggcgcgtggctgctgggaaatgcttccgcctc
tacactgcctgggcctacaagaacgagatggaggagaccacggtgccggagatccagagg
accaacctgggcaacgtggtgctgctgctcaagagtctgggcatcaacgacctcatccac
tttgacttcatggacccgccaccccatgagaccctggtgctggccctggagcagctgtat
gccctgggcgcgctcaaccaccttggggagctcaccaagctgggccggaagatggcagag
ctgccagtggaccccatgctgtccaagatgatcctggcctcggagcagtacaagtgctca
gagcagatcctctccattgcggccatgctgtctgtcaacaactccatcttctaccggccc
aaggacaaggtggtgcacgctgacaacgcccgcatgaacttcttcctgcccggcggggac
cacctggtgttgctcaacgtctacacccagtgggtggagagcgctttctccatgcagtgg
tgctacgagaacttcatccagttccgctccatgaggcgggcgcgggacgtgcgggagcag
ctggaggggctgatggagcgcatcgaggtggacctcacctccagcgagggagactacgtt
cccatccgcaaggctatcaccgctggcttcttctaccacacggcccgcctgacccgcacc
ggctacaagacagtcaagcaccagcagacggtcttcgtccaccccaacagctgcctcttc
gaggagcagccccgctggctcatctaccacgagctggtcttcaccaccaaagagttcatg
agacaggtcatagagatcgacagcacgtggctgctggaggtggcccctcattactacaag
gcgaaggagctggaggacgcctctgcgaagaagctgcccaagaaagtgggcaagacacgg
gaggagctgggctag
DBGET
integrated database retrieval system
