Chrysemys picta (western painted turtle): 101941082
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Entry
101941082 CDS
T04662
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
101941082 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpic01009
]
101941082 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpic04515
]
101941082 (PCDH11X)
Protein phosphatases and associated proteins [BR:
cpic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101941082 (PCDH11X)
Cell adhesion molecules [BR:
cpic04515
]
Cadherins
Protocadherins
101941082 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
K319L-like_PKD
Cadherin_4
TMEM154
DUF6249
Motif
Other DBs
NCBI-GeneID:
101941082
NCBI-ProteinID:
XP_005288365
LinkDB
All DBs
Position
9:30664420..31712890
Genome browser
AA seq
1244 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLTSP
LQFKLVYKTGDVPLVRVEENTGEIFTTSNRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GTPPRSSTAILQVTVTDVNDNRPVFKENDIEVSIPENAPVGTSVSQLHATDADLGSNAQI
HFFFSNQISSLAKRLFALDNTTGLITIKEPLDREESPVHKLTVLASDGSSIPSRATVTVN
ITDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPVIGLSIPENNAPGTQLTKISATDADSGRNAEISYMLGSDAPPIFNLDRRTGVLTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTLSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGRENFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRVQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYDLIPTATNPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITADHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETITNGSYVQELVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKSKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPAHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEMGRPQSPLKETSLESWTQPQSQRRVTFHLPDGSQESCSDSGLGDHEPSSSA
STSHPLPLGFPQEEYYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQSNPPLPSFGFQQGWGRGTIPEGRHALARPLPKDDTDKSQGGPRP
QFYNTCERHCTTEDPVKVIPLANFTPSQQAAVSGSNTFIHEHQL
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttattagcctgcattgtatttcag
tccggtgcccaagagaagaattatactgtgagggaagaactgccggaaaatgtcctgatc
ggcaatttgctcaaggatctgaacttgacactggacccagatgtaccccttacatcacct
cttcagttcaagcttgtgtataagactggggatgtgccattagtccgggtggaggaaaac
actggtgagatattcactacttccaaccgcatagaccgggagaagttgtgctctggcatt
tttagtgagaaccgctgcttttatgaggtggaggtagcagttttgcctgatgaagtcttc
agactggtcaagatcagattcctgatagaggatatcaatgacaatgctcccctttttccc
tcaacagtcattaacatctccatccctgagaacacagccattaattctcgctattctgtc
ccttctgccatcgatcctgacattggagtgaatggcattcagcattatgaacttcttaag
cccaaaacagcaccgaaaaggacatttggatccattacgaatgatcagggtcaaaatgta
tttggacttgatataattgaaacacctgagggagacaagtggccccagttgattgtccag
cagatcctggacagggagcagaaagacacatatgtgatgaagattaaagttgaagatggt
ggaacacctcccagatccagtacagccatcctacaagtaacagttactgatgtgaatgac
aatcgcccagtctttaaggaaaatgacattgaagttagcattccagaaaatgctccagtg
ggcacctcagtttctcagctccatgccactgatgctgatctgggctcaaatgcacagatc
cacttctttttcagcaatcagatctccagtctggccaaaaggctctttgccttagataac
accactggcctcatcacaattaaggaaccactggacagggaggagtcacccgtacacaag
ttaactgttttggcaagtgatggcagctcaattccatcaagagcaacagtgacagtaaat
atcacagatattaacgataatgtcccatccatagacacaagatacatcatcaatccagtg
aatgggactgtgctcctgtctgagaaagcaccgctcaatacaaaaattgccctgattaca
gtaatggacaaggatgctgatctgaatggaaaagttacctgcttcacagaccatgatgtc
ccttttaggttaaagccagtgtttgataatcagtttctattggagactgccacatttcta
gactatgaggctacgcgagaatatgctattaaaatagtggcctctgattcagggaaacct
cccttaaatcagtctgcaatgctgctgatcaaaatcaaagatgagaatgacaatgcccca
gtttttacacagcctgtcataggactttccattcctgagaacaatgctcctggtacccag
ctgaccaagatcagtgccacagatgcagacagtggacgcaatgctgagatcagttatatg
ctgggttcagatgcaccccccattttcaacctggatcgccgcacaggagttctgacagca
gtgagaaagctggacagggaaaagcaggacaggtactccttcactgtactggctaaggat
aatgggatgccaccattgcagaccaatgctactgtgacactatcagttctggaccagaat
gacaacagccctgcttttacccacaatgaatataatttctatgtgccagaaaacctgccc
atgtatggcacagtggggctcatcacagttactgacgctgactctggagagaatgctgca
gttactctctctatattaaatggcagagagaatttcattatcgatccacttactggtgta
ataagacccaatattacatttgatagagagcaacaaggttcttacactttccaggtgaag
gctgtcgatggaggaagagtgcaacgctcttccactgccaaagtgaccataaatgtagtt
gacgtgaatgacaacagaccggtttttgtcatcccttcatccaactactcctatgactta
attcccacagccaccaatccaggatccgtggtgactaaagtctttgcagttgacaatgat
acagggatgaatgcagagctccgctacagcattataggtgggaactcgagaggtttgttt
acaatcgatcagttaacaggcaacattactttgaaagagaaggtaatcacagcagatcat
ggcttacacaggctagtgataaaagtcaatgatttaggacagccagagtctctctatacc
atagcactggtgcatttatttgtgaatgagaccatcaccaatggttcatatgtgcaggag
ctggtgcgcagaaatatggaaacaccagtgggccagaatgttggggatggtgagataacc
ccacagaccaatgactatgtcaaaatcatcattgctataattgcaggcaccatgacagtc
atcctggtcatttttgtcactgctctggtacgatgccgccagacaccccggcacaaggtt
gtccaaaaaagcaagcagagtggggaatgggtctccccaaaccaggagaaccgacagatc
aagaagaagaagaagaaaaagaagcgctctcctaaaagcctccttctcaactttgtgaca
attgaagaatctaagcccgatgatccagcccatgagcatataaatggcactttagacatt
cctgtagagcttgaagaacagactatgggaaaatataactgggccaccacaccaaccaca
tttaagcctgacagcccagatttagcaaagcattacaagtctgcctctccacagcccacc
tttcaaattaaacccgagactcctgtaccccctaagaagcaccatgtcattcaggaactg
cctctggataacacctttgtggtgggttgtgactcgctctccaagtgctcctcaagcagc
tcggacccttatagcgtctccgaatgcagctgtcaaggtggcttcaagaccccaggcccc
atccacaccagacagcacacaaaagagatgggaagaccccagagccctttgaaagagaca
agcctggaatcatggactcagccccagtcgcaacgccgtgtcacgtttcacctaccagac
ggctcccaggaaagctgcagtgacagtgggcttggagaccatgaacccagcagcagtgct
agcacatcgcatcctctgccccttggtttcccccaagaggagtactatgaacaggcttcg
cccaacagtcggacagaaggagatggcaattcggacccggagtccactattgaagttaat
ctccaaaaagcccttgctgaagcttccgaaacctgcacacaagaatgtcttatcctaggc
cattctgacaactgctggatgccaccttctttgacacagtaccaacaatccaaccctcct
ttgccatcatttggcttccagcaaggatggggtcgaggaaccatacctgagggaagacac
gcgcttgcaaggcccctgccgaaggatgatactgacaaaagccaaggtggtccacggccc
cagttctacaacacctgtgaaagacattgtaccactgaagatccagtcaaggtgattccc
ctggcaaacttcactccatctcaacaggcagcagtgtctgggagtaacacctttatacat
gagcaccagctataa
DBGET
integrated database retrieval system
