Chrysemys picta (western painted turtle): 101941238
Help
Entry
101941238 CDS
T04662
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpic03016
]
101941238 (CDKAL1)
Enzymes [BR:
cpic01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
101941238 (CDKAL1)
Transfer RNA biogenesis [BR:
cpic03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
101941238 (CDKAL1)
Prokaryotic type
Methylthiotransferases
101941238 (CDKAL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
101941238
NCBI-ProteinID:
XP_065438036
LinkDB
All DBs
Position
2:184208124..184998732
Genome browser
AA seq
608 aa
AA seq
DB search
MPAACDSLLEDIEDIVSAQDVKPHDRQFARKNVVPKVRKRSSQKNVQADDDPPSDSIIPG
AQKIWIRTWGCSHNNSDGEYMAGQLASYGYKITENAAEADLWLLNSCTVKSPAEDHFRNS
IKKAQEDNKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVDVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSILMDMKREYCVADFKRVVDFLKEKVPGITIATDI
ICGFPGETDEDFQDTMKLVEEYRFPSLFINQFYPRPGTPAAKIHQVPALVKKQRTKDLSQ
LFHSYSPYDHKVGERQRVLVTEESFDSQFYVAHNQFYEQVLVPKDPEFMGKMVEVDIYEA
GKHFMKGRPVSDANVFTPSITRPLAKGEVSGITEVWPQWTLLVKNLQQVHRAHVHQEWNL
WTTHLEELLLLLGGGCMWQSKWSLAMKTLGIFWHKRKNIPTFARWDSHFQLSCSSQQKKL
YATGDQVQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcttgtgattcactgcttgaagatattgaggatattgtgtcagcacaagat
gtgaaaccacatgaccgacagtttgcacgaaagaatgttgttcctaaagtgcgaaaacgc
agttcacaaaaaaatgttcaggcggatgatgatccaccaagtgatagcattattcccggt
gcacaaaaaatctggatacgcacatggggatgttctcataataattcagatggagaatat
atggctggacagttggcttcttatgggtacaaaattacagagaacgccgcagaagcagac
ttgtggcttcttaacagttgcacggtaaaaagcccagctgaagatcacttcagaaactca
attaagaaagcccaagaagacaacaagaaagtggttttagctggatgtgttccacaagcc
cagcctcgtcaagactacctcaaaggtctgagcattataggggttcagcaaatagaccgt
gtagtagaagttgtggaggaaactattaaaggtcactctgtgagactgctgggtcagaaa
aaagataatggaaaacggctggggggagctcgattggatttgccaaagattaggaagaac
ccactgatagaaatcatttccatcaatacagggtgtctcaatgcatgtacctattgcaaa
accaaacatgccagaggagacctagcaagttatccaattgaagaactagtggacagagcc
aaacagtcttttcaagagggtgtttgtgagatatggctgaccagcgaagatacaggggct
tatggcagagacattggcacagaccttcctacacttctgtggaagctggttgacgttatt
cctgagggagctatgctgagacttggcatgacaaatcctccctatattttagagcatctg
gaggaaatggcaaagattctcaatcatccaagagtatatgcttttcttcacataccagtc
caatctgcttctgacagcatactcatggacatgaaaagagaatactgtgtggcagacttc
aaacgggtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacatc
atctgtggttttccaggggagacagatgaagattttcaagacaccatgaaacttgtagaa
gagtacaggtttccaagcctctttattaatcagttttacccacgtccagggactcctgct
gcaaaaatacatcaagttccagccctagtgaaaaagcaaagaacaaaggatctatcccaa
ctatttcattcatacagtccttatgatcataaggttggtgagagacagagagttctggta
acagaagaatcttttgattcccagttttatgttgctcacaatcaattctacgagcaggtt
ctcgtgccaaaggatcctgaattcatgggtaaaatggtagaagtggacatttatgaagca
gggaaacattttatgaaggggcggccagtgtcagatgccaatgtgttcactccatccatc
accagaccgctagcaaaaggagaggtttccggtataacagaggtgtggccccaatggaca
ctgctggtcaaaaatctccaacaagtgcatagggcgcatgtgcaccaagagtggaacctg
tggacaacacatcttgaagaactactgctactgttaggaggtggctgtatgtggcagagc
aagtggtctttggctatgaagactttggggatcttttggcacaaaaggaaaaatatcccg
acttttgcacgatgggatagccatttccagctcagctgtagtagccagcagaagaaactc
tacgcaactggagaccaagttcagtaa
DBGET
integrated database retrieval system
