Chrysemys picta (western painted turtle): 101941520
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Entry
101941520 CDS
T04662
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03015
mRNA surveillance pathway
cpic04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101941520 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101941520 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpic03021
]
101941520 (SYMPK)
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101941520 (SYMPK)
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101941520 (SYMPK)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101941520 (SYMPK)
U7-dependent histone pre-mRNA processing factors
101941520 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_MROH2B_C
PDS5
Cnd1
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
101941520
NCBI-ProteinID:
XP_065427570
UniProt:
A0A8C3FIG0
LinkDB
All DBs
Position
17:complement(5906995..5940393)
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AA seq
1285 aa
AA seq
DB search
MASRAGEGSNARMSIASQFFTQEEGSGTDSMTTSERVVDLLNQAALISNDSKINLLKQVQ
ELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLK
DENVNVVKKAILAMTQLYKVALQWMVKSKVINDLQEACWEMVSAMASDIILLLDSDNDGI
RTHAIKFVEGLIITLSPRMPDSDVPKRHENDISLDRIPKDHPYIKHNVLWEEGKAALEQL
LKFMVHPAISSINLTAALGSLASIARQRPMFMAEVIQAYETLHANLPPTLAKSQVSSVRK
NLKLHLLSVLKHPSSFEFQAQITTLLVDLGTQQAEITRSMPSLKEPRKRPRDESDPALKK
MKMEPALGEDDEDKDLEQAAAPPPKPSAQTSTHSDTDITAEFLQPLLTPDNVANLVLISM
VYLPDTMPASFQATYTPVESAGTDAQIKHLARLMATQMTAAGLGPGSSPRPPGVEHTKLL
KEEPKEEKLVKPESVLIKRRLSSLSQGQAISVLGAQGCVTILLEQEAPQAKRRPEPIIPA
TQPRLAGAGGRKKVFRLSDAIKPLTDVQMEKLKLGAVKRILCSERAVACSGAAQARVKIL
SSLVTHFDMPLKSEVLAFILDDIRNRLDLAFAWLYQEYNAYLSTYPSGSLDSYDECLIGL
LSGLQEKPDQKDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSR
QFQYLHVLLDLSSHEKDKVRQQAILFIKRMYEKDQLREYVEKFALNYLQLLVHPNPPSVL
FGADKDTEVAAPWTEETVKQCLYLYLALLPQNHKLIHELASVYTEAIADIKRTVLRVIEQ
PIRGMGMNSPELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVR
FLIPVLNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSAVSPLNPGELLIAL
HNIDSAKCDMKSIIKATNLCFGERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMY
PRLGGFVMNVLSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLSAVFEKCP
ELREPLLAHVRSFTPHQQAHVPNSTMTILEASSKQEVEVKDSQPLEEEELEPVPLLPRMS
QDMIALRLAQEKALKRQLEEEQKLKQPASQPRPAHALAPLPAEEPMDFREEGPEVETPTI
FISMQEEEEGSGGDGSLLDSSVEGPLPAKEAKSKEAGASSTADEGAESKPESLTPEEPVP
GGPQPVSQPEELPEPGAEQEQKAES
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgcgcaggggagggcagcaatgcccgcatgagcatcgcctcccagttcttc
acccaggaggagggcagcggcacagacagcatgaccacctcggagagggtggtggatctg
ttaaaccaagctgccctgatcagcaacgactctaaaatcaacctcctcaaacaggtccag
gagctaattataaacaaggaccccacgctgctggataacttcctggatgagatcatcgcc
ttccaggcagacaaatccatcgaggtgcggaagtttgtcatcggcttcatagaagaggcc
tgcaaacgggacatcgagctgctgctgaagctcatcgccaacctgaacatgctgctgaag
gacgagaatgtcaacgtggtgaagaaggccatcctcgccatgacccagctctacaaggtg
gcgctgcagtggatggtgaagtccaaggtcatcaacgacctgcaggaggcctgctgggag
atggtgtcggccatggccagcgatatcatcctgctgctggactcggacaacgacggcatc
cgcacccacgccatcaagttcgtggaggggctgatcatcacgctgtcgccccgcatgccc
gactcggacgtgcccaagcgccacgagaacgacatcagcctcgaccgcatccccaaggac
cacccctacatcaaacacaatgtgctgtgggaggagggcaaggcggccctggagcagctg
ctgaagttcatggtgcacccggccatctccagcatcaacctcacggcggcgctgggctcc
ctggcctccatcgcccgccagcggcccatgttcatggccgaggtgatccaggcctacgag
accctgcacgccaacctgccgccgacactggctaagtcccaggtgagcagcgtccgcaag
aacctgaagctgcacctgctgagcgtgctgaagcacccctcgtccttcgagttccaggcg
cagatcaccaccctgctggtggacctgggcacccagcaggccgagatcacccgcagcatg
cccagcctgaaggagccgcgcaagcgcccgcgggacgagagcgacccggccctgaagaag
atgaagatggagccagctctcggggaggatgatgaggataaggacctggagcaagcggcc
gcgccaccgcccaagccctctgcccagaccagcacccattcggacacggacatcacggcc
gagttcctgcagcccctgctgacgccggacaacgtggccaatctggtgctgatcagcatg
gtgtacctgcccgacaccatgcccgcctctttccaagccacctacacccccgtggagtcg
gccggcacagacgcccagatcaagcatctcgcccgcctgatggccacccagatgacggcc
gcagggcttgggccaggctcctctccccgtcccccaggcgtggagcacaccaagctgctg
aaggaggagccgaaggaggagaagctggtgaagcccgagagcgtgctgatcaaacggcgc
ctgtcctcgctgtcccagggccaggccatctccgtgctgggggcacagggctgcgtcact
atcctcctggagcaagaggccccccaagccaagcggcgtccggagcccatcatcccggcc
acccagcccaggctggcaggcgccggcgggcgcaagaaggttttccgcctgagcgacgcg
atcaagccgctgacggacgtgcagatggagaagctgaagctgggagccgtgaagcggatc
ctgtgttcagagagagccgtcgcctgcagcggggcggcccaggcccgtgtcaagatcctc
tcgtccctggtgacccacttcgacatgcccctgaagagcgaggtcttggccttcatcctg
gacgacatccgcaaccggctggacctggccttcgcctggctgtaccaggagtacaacgcc
tacctgagcacgtacccgtccggctccctggacagctacgacgagtgcctcatcggcctg
ctctccggcctgcaggagaagccagaccagaaggatgggatcttcaccaaggtggtgctg
gaagccccgctcatcacagaaagcgccctggaggtgatccgcaagtactgcgaggatgag
agccgcacctacctgggtatgtccaccctccgggacctgatcttcaagcgcccgtccagg
cagttccagtatctgcacgtgctgctggacctcagctcccatgagaaggacaaggtccgc
cagcaggcgatcctcttcatcaagcgcatgtatgagaaggaccagctgcgggagtacgtg
gagaagtttgcgctgaactacctacagctcctggtgcaccccaaccccccgtctgtgctt
ttcggtgccgacaaggacacagaggtggctgctccctggaccgaggagacggtgaagcag
tgtctgtacctgtacctggccctgctgccgcagaaccacaagctgatccacgagctggcg
tcggtctacacggaggccatcgctgacatcaagcgcaccgtgctgcgggtcatcgagcag
ccgatccgtgggatggggatgaactccccggagctgctgctgctggtggagaactgcccc
aaaggggctgagaccctggtgactcggtgcctgcacagcctgacggataaagtgcccccg
tctcccgagctggtgaagcgagttcgcgatctctaccacaagcgactcccggatgtccgg
ttcctcatccccgtcctcaacggcctggagaagaaagaggtgatccaggctctgcccaag
ctcatcaagctgaaccccatcgtggtgaaggaggtgttcaaccgcctcttggggacgcag
cacggcgaagggaattcggccgtgtcccccctgaaccctggggagctgctcatcgccctg
cacaacattgactccgccaagtgcgacatgaaatccatcatcaaagccaccaacctgtgt
ttcggggagaggaacgtctacacgtcagaggtgctggccgtggtgatgcagcagctgatg
gagcagagccccctgcccatgctgctcatgagaacggtcatccagtcgctgaccatgtac
ccacgcctaggcggcttcgtcatgaacgtcctgtcccgcctcatcatgaagcaggtttgg
aagtaccctaaagtgtgggagggcttcatcaaatgctgccagcgcaccaagccccagtcc
ttccaggtcatcctgcagctccctccgcagcagctcagcgccgtcttcgagaagtgcccc
gagctgcgggagcccctgctggcccacgtccgctccttcaccccgcaccagcaagcgcat
gtccccaactccaccatgaccatcctggaagccagcagcaagcaggaagtggaggtgaaa
gactcccagccgctggaggaggaggagctggaaccggtgcccctcctcccacgcatgtcc
caagacatgatcgctctgcggctggcccaggagaaggccctcaaacgccagctggaggag
gagcagaaactgaagcagccggccagccagccgcgccctgcccacgccctggcaccgctg
cccgccgaggagcccatggacttccgggaggagggtcccgaggtggaaacgcccaccatc
ttcatcagcatgcaggaggaagaggagggttcaggcggagacgggtccctgttggactcc
agcgtggaggggcccctacctgcgaaggaagcgaagagcaaggaggcgggagccagcagc
accgctgacgagggagccgagagcaagccagagagcctcacgccggaggagccggtgccc
ggcggaccccagcccgtcagccagccggaggagctgccagagcctggggcggagcaggag
cagaaagcagagagctga
DBGET
integrated database retrieval system
