Chrysemys picta (western painted turtle): 101941825
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Entry
101941825 CDS
T04662
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpic03009
]
101941825 (IGHMBP2)
03012 Translation factors [BR:
cpic03012
]
101941825 (IGHMBP2)
Enzymes [BR:
cpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101941825 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
101941825 (IGHMBP2)
Ribosome biogenesis [BR:
cpic03009
]
Eukaryotic type
Other ribosome biogenesis factors
101941825 (IGHMBP2)
Translation factors [BR:
cpic03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101941825 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
Helicase_RecD
Viral_helicase1
ResIII
nSTAND3
DEAD
AAA_16
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_25
Flavi_DEAD
IstB_IS21
AAA_33
Zot
SRP54
ABC_tran
AAA
PhoH
DnaB_C
VWA_2
ATPase
CbiA
AAA_18
RL
NTPase_1
AAA_31
UvrD_C_2
NPHP3_N
Gon7
Motif
Other DBs
NCBI-GeneID:
101941825
NCBI-ProteinID:
XP_005313276
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MAVPDFVSRQLELLQEEREAEIEETRAWRESIFLKELQRRGVCLLKLQVASQRTGLYGRL
LVTFQPRKYDPEAELPCNSFGPGDIVGLYESAGQGDPLSTGIVTRITPKSVTVAFEESRD
GLLSLGQENSYRLLKLANDVTYKRLKKALNTLNQYQSGPACNLIDVLFFSSDPSAPGETK
PLKFYNESLDVSQREAVSFSLAQKELAIIHGPPGTGKTTTVVELILQAVQQGLKVLCCAP
SNVAVDNLVERLAGYKEKILRLGHPARLLETIQHHSLDAVLARGDNAQIVADIRKDIDQA
FTKTRKTQDKGERSQFRNEIKALRKELKEREETAMTEILTRANVVLATNTGASSDGPLKL
LPENHFDLVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIISDKAAAKGLSLTLM
ERLIQKYGESIVKMLTVQYRMHQAIMQWASSEMYCGRLSAHPSVAHHLLKDLPGVASTEE
TRIPLLLIDTAGCGLFELEVEDEQSKGNQGEMRLVGLHVQALVEAGVKARDIAVIAPYNL
QVDMLREHLCHRYPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTR
ARRHVAVICDSRTVGSQAFLKRLVDYLSEHGEVRTAFEYLDDIVPENYSHENSQGHSEQG
AGPKTSTTSAPKPLPGGWKSKPNPTKPSTRKPAAGPLQGVNEARVERPEMKDNSGKFRAM
MVEFLESSEMQLDFPSSLNSHDRMLVHQMAEEYGLQHVSTGEGKERYISISKRTTTVSSS
PVNTGGSEQTPPAESQNPAKEALAPVKKGGSSMSSGKVDLKTLHLERMQREKAKQEESIR
KNQELSINLQETAGRKHKKEAKGKTVVKTGADSTAEEDIDALIFAAVKADNICGFPRCKA
SVTTLGQLCLHCNRRYCLSHHIPEIHGCGEKAKTQARQRISREGILYAGSGSKDKSLDPA
KRAHLQRRLDKKLNELTSQRKSKKKDKEK
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccggacttcgtgtcccggcagctggagctgctgcaggaggagagagaggct
gagatcgaggagaccagggcatggcgggaaagcatcttcctgaaagaactccagcgcaga
ggggtctgcttgctcaaactgcaagtagccagtcaaagaactgggctgtatggacggcta
cttgtaacgtttcagccgagaaaatacgatccagaggcagagctgccctgtaacagcttt
gggccaggtgacattgtgggtctttatgaatctgctggtcagggtgatccactttccaca
ggaattgtgacccgcataacccccaaatcggttaccgtcgcctttgaggagtctcgagat
ggcctgttgagcttgggccaagagaattcctaccgcctgttgaagctagccaatgatgtc
acctacaagaggctgaaaaaagctttaaacacactaaatcagtatcagtctggtccagca
tgcaaccttatcgatgtcctcttcttttcctctgatccaagtgctcctggtgaaacaaag
cctttaaaattctataatgaatcgctggatgtctcccagagggaggctgtttccttctcg
ctggcacagaaagaacttgccatcatccatggaccacccggcactggcaaaaccactacc
gtggtcgagctaatacttcaagctgtgcagcaaggcctgaaagtcctgtgttgtgctccc
tcaaacgttgcggtggataatctggtggaaagactggctggctacaaggagaagatattg
cgtcttggtcaccctgctcgtctgctggagaccatccagcatcattccctggatgcagtc
ttggcacgtggcgataatgcccagatagtggcagatatcaggaaggatattgaccaggca
ttcacaaaaaccagaaagacccaggacaagggggagagaagccagttccgaaatgagatt
aaggcactgagaaaggagctgaaggagcgagaagaaactgctatgactgaaatccttacc
cgggctaatgttgttcttgcaacaaatacaggtgcttcctctgatggtccactgaagtta
cttcctgaaaatcactttgatctggtggtgatagatgaatgtgctcaggccctagaagca
agctgctggatccctctgctgaaggccagaaagtgtatcctggctggcgatcacaaacag
ctgcctcccacaatcatatctgacaaggctgcagcaaagggtctttctctcaccttaatg
gagcgtctgattcagaaatatggcgagagcatagtgaagatgctgactgtgcaataccga
atgcatcaggccataatgcagtgggcctcctcagaaatgtactgtggccgactctcagct
cacccttccgtggcgcatcatttactgaaggacctgccgggagttgcttctacagaagag
actaggattccattgctgcttatagacacggctggctgtggcttatttgagcttgaagtg
gaagatgaacagtctaaagggaatcaaggggaaatgcgtcttgttggcctgcacgtccag
gctttggtggaagctggtgttaaagcaagagacatcgctgtcattgctccttacaacctc
caggtggacatgctaagagagcatctttgtcaccgatatccagagctggaaattaaatca
gtagatggcttccagggacgggagaaggaggctgtcgtgctctcctttgtgagatccaat
cggaagggcgaggtgggttttctcgctgaagaccggaggataaacgtggccgtgactcgg
gcacgacgccatgtggcagtcatctgtgactcgcggaccgtcggcagccaggcctttctg
aaacggctggtggattatctgagtgagcatggggaagtgcgaacggccttcgagtacctc
gacgacatcgtgccagaaaattactctcatgagaactctcaaggtcatagcgagcaaggg
gcagggcctaaaaccagcacaacctctgctccgaaacctctgcctggaggctggaaatcc
aaaccaaatccaacaaaaccatccacacgcaagccagcagcaggtcccttgcagggtgtg
aacgaagccagggtggaaagaccagagatgaaagacaattcaggcaagttcagagccatg
atggtagagtttctggagagcagcgagatgcagttggatttcccttcctccttaaactct
catgacaggatgctggtgcaccaaatggccgaagaatatgggttgcagcatgtaagcacc
ggggaggggaaagagaggtacatcagcatcagcaagagaaccaccaccgtcagctcctct
ccagtgaatacgggtggcagtgagcaaacccctcctgccgaatctcaaaaccctgccaaa
gaggcgctagcccctgtcaagaagggaggaagcagcatgagctcagggaaagtggatctg
aaaacgctgcacctggagagaatgcaacgggaaaaagccaaacaggaagagagcatcaga
aagaatcaggagctgagcatcaatttgcaggaaacagctggaaggaaacacaaaaaggaa
gccaaaggaaagactgtggttaaaaccggagcggacagtacagctgaagaagatatcgat
gccctgatttttgcagcagtgaaagctgacaatatatgtggtttccccaggtgtaaagcc
agcgttacgaccttgggacagctctgtctgcattgcaacaggcgctactgcctcagccat
cacatcccagagattcatgggtgtggggagaaggccaaaacacaagctcggcagagaatt
agcagagaaggaattctctacgctgggagtggttcaaaagacaagtcactggacccagca
aaaagagctcatctccagaggcgcctggataaaaaacttaatgaattgaccagccagaga
aagagcaaaaagaaagacaaagaaaaatga
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