Chrysemys picta (western painted turtle): 101942511
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Entry
101942511 CDS
T04662
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X5
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101942511 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpic04131
]
101942511 (VPS8)
Membrane trafficking [BR:
cpic04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101942511 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
TPR_Vps41
zf_RING_Vps8_fungal
zf-RING_2
Beta-prop_WDR5
Beta-prop_WDR3_1st
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
101942511
NCBI-ProteinID:
XP_005308715
LinkDB
All DBs
Position
9:complement(49507014..49772424)
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AA seq
1405 aa
AA seq
DB search
MEPESLGAEQGASLPGPAEELGTLLGQDAALQKLSGEELDRELESKSDLIDDKEFDIPQV
DTPPTLESILNETDDEEESFVLEDPSLLNIDNIDTHSYDTSSLASSDSGDRTHLKRKKKL
PDSFSLHGSVVRLSLLKGISAQIVSAADKVDAGLPTAIAASSLIAVGTSHGLALIFDPNQ
ALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPG
TAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAK
TELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWYFVAVQNS
VNPMLAFCRGDVVHFLLVKRDDSGAIHVTKQKQLHLHYDLINFTWINSRTVVLLDSVEKL
HVIDRQMQEELETIEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSCGGQI
FYLGTKSVHLMMIRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDGNKRKAV
IADRMVEILFHYADRTLKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRTDLLFSQMYDK
LSENSVAKGVFLECLEPYILSDKLMGMTAQVMKDLLLHYQDKNLMEDMEACIVHMDITSL
DIQQVVLLCWENHLYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEKVVMGNK
LLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASADEEVYPYVRTLLHFD
TREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAK
PNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEENRLIPMAEKAE
FYQICEFMYEQEHLYDKIIDCYLRDPVRKEEVFNYIHNILSIPGYSAEEKQSVWQKAMKH
IEELLLLSPNKAADLIATHFNDQIEGIIKNLQDQFLLFQFLRSLLDPREGINQDMLQISP
CVTEQFIELLCHYSPDQVLETLQVLEFYRLEETIQITQKHLLHEASSYLLEKKGDVHGAF
LVMLEQLRSKLLMLTYEIEESTELHLLKDIEDTLVKTIALCQRNSHSLNQQQREALWFPL
LEAMMSPQKLSSSTVLCQYSEPLKSLTMQVLNNMAAFIALPSILQRILQDPVYGRGKLGE
IQGLVLGMLDTFNYEQTLLETTTNLLNHDLHWSLCNLRASITRGLNPKQDYCCICLQQYK
RRQEMADEIIVFSCGHLYHSLCLLSKECGIETKGQMRWTCYKCNSSNKGGKLSENFSELK
KGNGASLAQSSSESLLDSQQIQAFDQLCRLYRGTSRLALLTELSRTRGGEKHGLLNVSQG
DPALNSVFQNENFQLHLAPPPLTEE
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgagagcctcggcgcggagcagggcgcctctctcccggggcccgccgaggag
ctggggacgctgctgggccaggatgccgcgctgcagaagctgagcggcgaggagctggac
agggagctggagtccaaaagtgacctgatagatgacaaagagtttgatattccccaggtt
gatacccctccaacactggaaagcatattaaatgagactgatgatgaagaagagtctttc
gttcttgaggatccctctcttttaaacattgataacattgacactcactcttatgacaca
tcttccttggcaagctcagacagtggggacaggacgcacttgaaaagaaagaaaaagctc
cctgattctttctctcttcatggatcggttgtccgtctttctcttctgaaaggaatttct
gcccaaatagtatctgctgcggacaaagtggatgctggtttacctactgcaatagcagca
tcaagtctgatagcagtggggacttcccatggtttggcattaatttttgatccaaaccag
gctcttcggctctgtctgggcagcactgctgttggggcccagtatggggctatctcggct
ctcagtatcaacaatgactgttcaagactactgtgtggctttgcaaaaggacagattacc
atgtgggatctggctagtgggaaacttttaagatcaataacagatgctcatcccccagga
acagcaattttacacatcaagtttacagatgacccaacgcttgcaatttgcaacgacagt
ggaggttccgtgtttgagctgtcatttaaaagagttatgggtgtgagaacatgtgagtct
cgatgtctgttcagtggttccaagggagaagtttgctgtatcgagcccttgcatgcaaag
actgaattgagagatcatcctatcacccagtactcgctactggcaatggcttccctaact
aagatcctagtcattggcttgaaaccatctttgaaggtgtggatgacttttccgtatggt
cgtatggatccctctagtgtgccactgctggcatggtattttgttgctgtacagaactct
gtgaaccccatgcttgccttctgtcgaggagatgttgttcattttcttttggtgaagaga
gatgactcaggtgcaatacatgttactaagcaaaagcaacttcatctgcactatgacctc
atcaattttacttggataaactcacgcacagtagtgcttctggacagtgtggagaagctg
cacgtgatagatcgccagatgcaggaggaactggagactatagagatttcagaggtgcag
ctagtatataacagcagtcacttcaaatcactggccacaggaggcaatgtcagccaagca
ttggccctggttggagagaaagcatgttaccagtccatcagcagctgtggtggtcaaatc
ttctatcttggcacaaagtctgttcatttgatgatgataaggagctggagagagagagtg
gatcaccttttgaaacaagactgtcttactgaggccctggctctagcgtggtcttttcat
gaaggtaaagcaaaggctgtagtagggttgtctggggatggcaataagcgaaaggctgtc
attgcagaccgaatggttgaaatcctcttccattatgctgatcgaactttgaagaaatgt
cctgaccagggaaaaatccaagttatggagcaacactttcaggatatggtgcctgtcata
gtcgattactgccttttacttcagcgaactgaccttctgttcagccagatgtatgacaaa
ttgagtgagaattcagtggcaaagggtgtttttctggagtgcctggagccttacatttta
agtgataagttgatgggaatgaccgctcaagtgatgaaagacttgctgcttcactaccaa
gataagaacctaatggaggacatggaggcctgcattgtgcatatggatatcaccagccta
gacatacagcaggtagttctcctgtgctgggaaaatcatctgtatgatgccatgatctat
gtgtacaacagtggaatgaatgacttcattagtccgatggagaaattgttcaaagtcatt
gctcctccacttaatgctgggaagtctctcacagatgagaaggtggttatgggaaacaag
ctccttgtgtacataagttgctgtttagcaggccgtgcttatccattgggtgatattcct
gaagatctggtacccttggttaaaaaccaggtgtttgaatttcttatccgtctccactca
gctgaagcatctgcagatgaagaagtttacccgtatgttcgtacgctgctgcactttgat
accagagagttccttaacgttcttgcactgacttttgaagactttaagaatgacaagcaa
gcagtggagtatcaacaaagaattgtggacatcctgctaaaggttatggtggaaaattct
gatttcaccccatcacaagttggctgtctttttacctttcttgcccggcagctggctaag
cccaacaatacactgtttgtaaacaggacgctttttgaccaggtccttgaatttctgtgc
agccctgatgacgattcccgacactcagagagacagcaggtccttttagaactactgcaa
gctggagggatagtacagtttgaagagaatcgtctcatccctatggcagaaaaagctgaa
ttctaccaaatttgtgagtttatgtatgaacaggagcatctctatgacaaaatcattgat
tgttacttacgtgatccagtgagaaaggaagaagtgttcaactacatccacaatatccta
tccattcctgggtacagtgccgaggagaagcagtcagtatggcagaaggctatgaaacac
attgaggagctgctgttactgagcccgaataaagcagcagacctgatagcaactcacttc
aatgaccagattgagggtatcattaaaaatcttcaggaccaattcttgcttttccagttt
ttgagaagtcttcttgacccaagggaaggtatcaatcaggacatgctacagatatctccc
tgtgtcactgaacagttcattgaattgttgtgtcactacagtcctgaccaggttttagag
acactgcaggttttggagttctacagactggaagagaccattcagattacccagaaacac
ctgctccatgaagcttcctcctacctgctggagaagaaaggagatgttcatggtgccttc
ctagtaatgcttgagcaactacgaagcaagttgttgatgcttacatatgaaattgaagaa
tcaacagaactccacttattaaaggatattgaagataccttggtgaaaacaattgcactt
tgccagaggaattcacatagtttaaaccagcagcagcgagaggcactctggtttcctctc
ctggaggctatgatgtcgccacagaagctatccagttcgacagtgttgtgtcagtattct
gaacctctgaagagtttgacaatgcaagtgctaaacaacatggctgcatttattgccctt
ccctcaatcttgcagagaattctccaggatccagtttatggtagagggaaacttggagaa
attcagggacttgtactggggatgctggacacatttaactatgagcaaacccttctagag
acaactaccaacctcctgaaccatgatctccactggtccttgtgtaacttgagagcctcc
atcactagaggacttaacccaaagcaggattactgctgtatctgtctgcagcaatacaag
agaaggcaagagatggctgatgaaatcattgttttcagttgtggccatttgtaccactca
ctctgtctgctgagtaaagagtgtggcatagaaaccaagggacagatgagatggacttgc
tataaatgcaactcgagtaacaaagggggaaaactgagtgagaatttctcagaactgaaa
aagggaaatggtgcatctctggcacagtcaagttcagagtccctgttggattcccagcaa
atccaggcttttgaccaactctgtcgactctatcgaggaacctccaggttagctctcctg
acagaattgtctcgaactcgtggtggtgaaaaacatgggctcctcaatgtctctcagggt
gaccctgcactgaacagtgtcttccagaacgagaatttccagctgcatctcgctccccct
ccactgacggaagagtag
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