Chrysemys picta (western painted turtle): 101942618
Help
Entry
101942618 CDS
T04662
Name
(RefSeq) squalene synthase-like isoform X2
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic00100
Steroid biosynthesis
cpic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
101942618
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cpic01006
]
101942618
Enzymes [BR:
cpic01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
101942618
Prenyltransferases [BR:
cpic01006
]
Terpene biosynthesis
Squalene/phytoene synthase
101942618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
Motif
Other DBs
NCBI-GeneID:
101942618
NCBI-ProteinID:
XP_005290732
UniProt:
A0A8C3I568
LinkDB
All DBs
Position
3:138550423..138578684
Genome browser
AA seq
418 aa
AA seq
DB search
MERVGKWLGRPREIYNLLRFKMGGGAAVMPPLDQDALSDGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTVEDDMTINLETKVPILHDFHSYLYQPDWRYLESKEKDK
QVLEDFPTISLEFRNLAKVYRDVIVDICHKMGAGMAEFLEKKVDTQHELDKYCHYVAGLV
GIGLSRLFSASELEDPIVGQDAELANSMGLFLQKTNIIRDYLEDQVEGREFWPREVWSRY
AKKLSDLAKTENIDVAVQCMNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNKQVFRGLVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKVPSTDPSSNKT
QQIIVSIRTMSLPNGVAVSRNHYSPIYLSCAMLLAALSWQYLSAMSKASEEYVQASEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtggggaagtggctgggccgcccccgggagatctacaacctgctgcggttt
aagatgggcggcggcgcggcggtgatgcccccgctggaccaggacgcgctcagcgacggc
ctcaggacctgctaccggtacctgaaccagaccagccggagcttcgccgccgtcatccag
gccctggacggggagctgcgtcatgctgtgtgcatattctatctggttctccgagctctg
gacacggtagaagatgatatgactatcaacttagaaaccaaggtcccaatattgcatgac
ttccactcctacctgtatcagccggactggagatatttggagagcaaggagaaggacaag
caggtgcttgaggacttcccaacgatctccttggagttcagaaacctggcaaaggtgtat
cgagatgtgattgtagatatttgtcacaagatgggagctggaatggccgagttcttggaa
aagaaggttgacacccagcatgagttggataagtattgtcactatgttgctgggctggtg
ggcattggcctttcccgtctgttctctgcatcagagctagaagaccctatcgtaggacag
gacgcagagcttgcaaattccatgggcctctttcttcagaaaaccaacatcattcgtgat
tatctggaggaccaggtggagggaagagagttctggcccagagaggtttggagcaggtat
gccaagaagctgtcggatctcgccaagacagagaacattgacgtggccgtccagtgtatg
aatgaactgatcacaaatgcattgcaccacgtccccgatgtcctcacctacttatctaga
ctgaaaaaccaaagtgtcttcaacttctgcgctattccgcaggtgatggccatcgccact
ctggcggcctgttacaataacaaacaggtgtttagaggtctagtgaagattcggaaagga
caagctgtcactttaatgatggacgccacaaacatacaagctgtcaaggctataatgtac
cagtatgtggaagagatctatcagaaggtcccaagcacagacccttcttctaacaagacc
cagcagatcatcgtctcaatacggacaatgagtttgcccaatggcgtcgcggtatcccgt
aaccattactcccctatctacctttcatgcgccatgcttctggcagccctgagctggcaa
tacctgagtgcgatgtcaaaggcatcagaggagtatgtgcaggccagcgagaactga
DBGET
integrated database retrieval system
