Chrysemys picta (western painted turtle): 101942753
Help
Entry
101942753 CDS
T04662
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X8
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101942753 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpic03000
]
101942753 (ARID1B)
03021 Transcription machinery [BR:
cpic03021
]
101942753 (ARID1B)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101942753 (ARID1B)
Transcription factors [BR:
cpic03000
]
Eukaryotic type
Helix-turn-helix
ARID
101942753 (ARID1B)
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101942753 (ARID1B)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101942753 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
101942753
NCBI-ProteinID:
XP_008175900
LinkDB
All DBs
Position
3:49080385..49486188
Genome browser
AA seq
2338 aa
AA seq
DB search
MIMAAQVAAAPAGAKNNKGKTSSLPGNLSQDLSSGGAAATATGGPGPGSMLGVGDGTNSS
SLNNVDHHLLHHHNELNMANNATSAAATGNNNNNANTSSSSSSSSESALKEGGSSSGLPS
SSSSSSSSSNPGSAMETGLLPNHKLKNVGGDHPAAPPHHHAHHPHHHAHHHHAHHQHHHH
HALQQQLNQFQQQQQPPPQHHPMQNNNSLGGGSSNNNNGGGGAAQPSADMEQQQHGGKDS
VLGNQAEPPPPPQQMLNKGGEEEELPSKMGEQIGGRYDHPSLGPLGGQQQQQPQSAGSGS
GSSSSSGGGGSGGGGGPSAVGVSEFNSYYGNPAPASSATASRAGPCFDQHGGQQSPGMGL
MHPTAAPNSMDPLQNSHDGYPNSQYNHYPGYGRPGGAAAGGVGAAAAAAAAASGAGGSGY
GGSSSGYGVLSSPRQQGSTMMMGPGGGASLGKAAATSGAGGFQRFSGQNQHPSGATPTLN
QLLTSPSPMMRSYGSSYPDYSNPSAPPQQQPQPQAATAAPGSQQAAAGMGMGMGKDMGSQ
YGSANPAWAAAQQRAHPAMSPGSTGQTINRTQGSPMDPMVMKRPQLYGMGNNPHSQTQQS
SPYPGQSYGPPGPQRYPMGMQGRTSGALGGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYN
QQPQPQHLPPQAQYLSQAQQRYQTQQDMSQEGYGTRSQPPIASGKPNHEDLNLIQQERPS
SLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQSPFSPHASPHLSGIPGGPS
PSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPSSQSESSSHPALSQSPMPQDRGFMAGI
QRNPQISQYGPQQTGPSMSPHPSPGGQMHPGIGSFQQSNSSGTYGPQMSQYGPQGNYSRP
STYSGVPNTSYSGPGPGMGINANSQMHGQGPSQPCGTMPLGRMPSAGMQSRPFPGNMGSM
TPNSPGMSLQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGIMGSS
SPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSTAPMGLADMMTPGESKLPLPLKADGKEEG
PPQPESKSKKSSSSTTTGEKITKVYELGSEPERKMWVDRYLTFMEERGTPVASLPAVGKK
PLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKI
ERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPA
STPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTPNAPYQQGMNMPDMMGRMPYE
PNKDPFGGIRKVPGSSEPFMAPGQMPNSGIQDIYNQTPSGAMSTISMSQRQQFSYGGGYD
RRSDHGLGPEGSMGPPGQSNMVPSNSDPSMYSPNRYPGQQRHEPYGQQYPGQGPPSGQPP
YGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGDMYNMQYGNQQQEMYNQYSNTYSGSDRR
PIQGQYPYPYNRERMQGPGQIQQHGIPPQMIGGPMQSSSTSEGPQQNMWPTRNDMPYPYQ
NRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRP
PQSSYQTPPSMPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQVTGP
PSQPPPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWAL
DTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKALDHNA
VKKDDSQSLAVDTGKEEENDECIDYFDEDEEEDEEEEEEDEIEKIEGEEKSTVFATPSAI
ADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQ
THFESKMEIPPRRRAPPPLNSPSKKKDLEGKGEPEEQQEKSITATIDDVLSARPGALPED
SNPGSQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDSLAKRCICVSNI
VRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEEEDKGVACSKDE
WWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVG
PNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMS
MALLSNLAQGDMLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPS
VDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggccgcgcaagtagcagcggctccggcgggtgcgaagaacaacaagggcaaa
acctcgagtttgccgggcaacttgagccaggatctcagctcggggggagcagcggccaca
gccaccgggggacctggaccgggctccatgctgggggtcggagatgggactaacagcagc
agcctgaataatgtagatcaccatctcctgcaccaccataatgaactgaacatggccaat
aatgcaacttctgctgctgccaccggtaataacaacaacaacgctaacaccagcagtagc
agcagctcctcttcggagtcggctctgaaagaaggtggaagctcatcggggttaccgtct
tcttcttcctcctcctcctcctcctccaacccgggctcggccatggagacggggctgctc
cccaaccacaaactgaaaaacgttggaggcgatcaccctgctgcacctccccaccaccat
gcccaccaccctcatcaccatgcccaccaccaccatgcccaccaccagcaccaccaccac
catgcactacagcagcaactaaatcaattccagcagcagcagcagccgccgcctcagcac
catccgatgcagaataacaacagcctcggcggcggcagcagcaacaacaacaacggcggt
ggcggcgctgctcagcccagtgcagacatggagcagcagcaacatggaggaaaagacagt
gttttgggaaatcaggccgagcccccgccgccgccgcagcaaatgctgaataaagggggc
gaggaggaagagctgcccagcaaaatgggcgagcagatcggcggccgctacgatcacccc
agcctgggacctttgggcggacagcagcagcagcagccccaaagcgctgggagcggcagc
ggcagtagtagcagcagcggcggcggcgggagtgggggaggcggcggcccctccgcggtg
ggtgtctcggagtttaatagctattacggcaaccctgcccctgccagcagcgctacagcg
agccgagccgggccttgctttgatcaacatggcggacaacaaagccccgggatggggctg
atgcaccccacggcggcccccaacagcatggaccccctgcagaactcccacgacggttac
cccaacagccagtacaaccactaccccggctacggccggcccggcggcgccgcagcagga
ggagtgggagcggcggcggcagccgccgcggctgcatcaggagccggaggaagcggctat
gggggctcgtcctctggctacggggtgctgagctcccccaggcagcagggcagcaccatg
atgatgggcccaggtggaggggccagccttggcaaggctgctgcgacttctggggctgga
ggctttcagagattttccgggcagaaccagcacccgtccggggccacccctaccttgaac
cagctgctcacttcccccagccccatgatgaggagctatggcagcagctaccctgattac
agcaaccccagtgccccaccacagcagcagccacaaccccaggcagcgacggcagcccca
ggaagccagcaggcagcagcgggcatgggcatgggcatgggcaaagacatgggctcccag
tatggatctgcaaacccagcctgggcagcagcacaacaaagagctcatccagctatgagt
cctggaagcactggtcagaccatcaacagaacccagggcagcccaatggatccaatggta
atgaagagacctcagttgtatggaatgggcaataaccctcattcacagacacagcaaagc
agtccatacccggggcagtcatatggccctccaggacctcagcgatatccgatgggaatg
cagggacggacctcgggagccctgggaggaatgcagtatccacagcaacagatgccgcct
cagtatggtcagcaaggtgtaagtggctactgccaacagggccaacagccatattacaac
cagcaaccgcaacctcagcatctgccgccccaggcacagtatctgtcgcaggctcagcag
aggtaccagacacagcaggacatgtctcaggaaggctatggaaccagatcccaaccccct
atagcctcaggaaagcctaaccatgaagacttaaacctaatacaacaagaaagaccatca
agcttaccagatttatccggctccattgatgacctgcccactggaactgaagcaacactg
agttcagcagttagtgcatcaggttctacaagcagccagggagagcagagtaaccctgca
cagtcacctttctcccctcatgcctccccacatctctctggcatcccagggggtccatca
ccttcccctgtaggctctcctgttggaagcaaccaatcaagatctggtccaatttctcct
gcaagtattccaggtagtcaaatgccacctcagcctcctagtagtcaatcagaatccagc
tcccatcctgccttgagccagtcaccaatgccccaagatcgaggttttatggcaggcata
caaaggaacccacaaatatcccaatatggacctcaacagactgggccttccatgtcacca
catccttcacctggaggccaaatgcatcctgggattggtagtttccagcagagtaattca
agtggtacttatgggcctcagatgagccagtatggaccacaaggaaactactccagacca
tcaacatacagtggggtgcctaacacaagttacagtggcccaggacccggcatgggtata
aatgccaatagtcagatgcatggacaggggccaagccagccatgtggtaccatgcccctg
ggacggatgccatcagctgggatgcaaagcagaccatttcctggaaacatgggcagtatg
acccccaattctcctggcatgtctctgcagggaggccctgggatgggcccacccatgcca
actgtgaaccgtaaggcacaggaggcagctgctgcagtgatgcaggctgctgcaaactcc
gctcagagcaggcaaggcagttttcctggcatgaatcagagtggtattatgggatccagt
tctccctacacacagccgatgaacaacagctctggcctgatgaacccacaagctcctcct
tacagcatggcacctaacatggtgaacagttcaacagcacctatgggtcttgcagatatg
atgacacctggtgagtccaaactgccccttcctctcaaagcagatggcaaagaagaagga
cccccacagcccgagagcaagtcaaagaaatcaagttcctccaccacaactggagaaaag
atcacaaaagtctatgagctgggaagtgagccagagcgcaagatgtgggtggatcgatac
ctcaccttcatggaagaaaggggcacgcctgtggccagtctgccagctgtaggcaagaag
ccactggacctcttcaggctttatgtctgtgtcaaagagattggaggtttagcacaggtt
aataaaaacaagaagtggcgcgagttggcaaccaacctgaatgttggcacttcaagcagc
gcagccagctccctgaaaaaacagtatattcagtacctgtttgcctttgagtgtaagata
gaacgaggggaggagccccctccagaggtcttcagcactggagatactaagaaacaacct
aagattcagccgccatctcctgctaattctggttccctacaaggtccacagactccccag
tctactggtagtaattccatgacagaagtgccgggcgacttgaagcctccaacaccagca
tcaacacctcatggacagatgacgcccatgcagggcggcagaaacagtgcagttagtgtg
cacgatcccttttctgatgtaagtgattctgcattcccgaagcgaaactccatgacgcca
aatgcaccataccagcaagggatgaacatgccagatatgatgggaaggatgccctatgaa
ccgaataaggacccttttggtgggataagaaaagtgcctggaagcagtgagcccttcatg
gcccctggacaaatgcccaatagtggaatacaggatatctataaccagactccatctgga
gcaatgtccaccataagcatgagccagcggcagcagttctcttatggaggtggctatgac
aggaggtcggatcatgggctgggtcctgaaggcagtatgggaccacctggtcagagcaac
atggtgccttcaaacagtgacccaagcatgtactctcctaatcgttaccctggccagcag
aggcatgaaccatatgggcagcagtatccagggcaaggacctccttcaggacaaccaccg
tatggaggacatcaacctggaatgtatccacagcagcagaactataagcgtcatatggat
ggcatgtatgggcctccagcaaaacgccatgaaggggatatgtataacatgcagtatggc
aatcagcagcaagaaatgtataaccagtacagcaacacttactctggatcagacaggagg
cctatccagggacagtatccatatccttataacagggagaggatgcagggccccggacaa
atccagcagcatggaatacccccacagatgattggtggccccatgcaatcatcatccacc
agtgaaggtcctcagcagaatatgtggccaacacgaaatgatatgccttacccttaccag
aacaggcaaggccctggaggccctgcacaggccccaccctatccagggatgaaccgcact
gatgatatgatggtacctgaccagagaataaaccatgagagtcagtggccttctcatgtc
aaccaacgtcagccttcttacatgtcatcctcagcctccatgcagcctatcactcgacct
cctcagtcgtcctaccagacaccaccctcaatgccaaaccacatctctagggctccaagt
ccagcatccttccagcgctctttagagaaccgtatgtctccaagcaagtctcctttccta
ccctctatgaagatgcagaaggttatacccacagttccagtgtcacaagtcacaggacct
ccatcccagccaccaccaattaggcgagaaattactttccctccaggctccgtagaagca
tcgcaaccagtcttaaaaccaagacgaaagattacctcaaaagatattgtaactcctgag
gcctggcgagtgatgatgtctcttaaatctggccttttggctgaaagtacctgggctcta
gacactattaatattcttctgtatgatgacagcactgttgctactttcaacctttcgcag
ttatctggatttcttgagcttttggtagaatattttagaaaatgcctgattgacattttt
ggaatccttatggaatatgaagtgggagatccaggtcacaaagcacttgatcacaacgca
gtcaagaaggatgacagccagtccttggcagtggatactggaaaagaggaggaaaatgat
gaatgtattgactactttgatgaagatgaggaggaggatgaagaggaggaggaggaagat
gaaattgaaaaaatagaaggagaagaaaagagcactgtttttgccactcccagtgccatt
gctgatccaagtgagaggccaaaacaagccagtaaatttgacaagctgccaataaagatt
gtaaagaaaaataatctatttgttgttgacagatctgacaaactggggcgtgttcaggaa
ttcaacagtgggcttctccactggcagcttggtgggggtgatactactgaacacatccag
actcactttgagagcaagatggagattcctccacgaaggagggcccctccgcccttgaac
tctccaagcaaaaagaaggatctggaagggaaaggtgaacctgaagaacaacaggaaaaa
agtataacagctaccatcgatgatgtcctgtcagctcgaccaggagcattgcccgaagat
tcaaaccctggttcccagacagagagcagtaaatttccctttgggatccatcaagccaaa
agccaccggaatattaaactgctagaagatgagccaaggagccgggatgagactcctcta
tgcaccataactcattggcaagactccttggctaaacgctgcatctgtgtgtcaaatatt
gtccgtagcttgtcttttgtgcctggcaatgacgccgaaatgtccaaacatccaggcttg
gtgctgatcctgggaaagttgatcctccttcaccatgagcatccggaaagaaagcgagca
ccacagacatatgagaaagaggaagaggaggacaaaggggtggcctgcagcaaggatgag
tggtggtgggactgcctcgaggtcttgagggataatacattggtcacattagccaacatt
tctgggcagctagacttgtctgcttatacagaaagcatctgtttgccaattttggatggc
ttgctgcactggatggtgtgcccatctgcagaggcacaggatccttttccaaccgtgggg
cccaactcagtcctatcgcctcaaagacttgtgctggagaccctgtgtaagctcagtatc
caagacaataatgtggaccttatcttggccactcccccattcagtcgtcaggagaaactc
tacgctactttagttaggtacgttggggaccgcaaaaacccagtctgccgagaaatgtcc
atggctctcttatcgaaccttgcccagggggacatgttagcagcaagggcaatagctgtg
cagaagggaagcattggaaatttgataagtttcttggaggatggggtcactatggcccag
taccaacagagccagcataacctcatgcacatgcagcctccacctctggagccacctagc
gtagacatgatgtgcagggcagccaaggctttgctagccatggctagagtggacgagaac
cgctcagagttccttttgcatgagggtcgtttgctggatatctcaatatctgctgtcctg
aactctctggttgcatctgtcatctgtgatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
