Chrysemys picta (western painted turtle): 101943074
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Entry
101943074 CDS
T04662
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101943074 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpic03021
]
101943074 (SMARCC2)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101943074 (SMARCC2)
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101943074 (SMARCC2)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101943074 (SMARCC2)
PBAF complex
101943074 (SMARCC2)
GBAF(ncBAF) complex
101943074 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_2
Chromo
Motif
Other DBs
NCBI-GeneID:
101943074
NCBI-ProteinID:
XP_008173469
UniProt:
A0A8C3HG74
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MDRNVEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLGKLKDIIKRHQGTVTEDRNNASH
VVCPVPGNLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEASVEDAPTPEKPRK
VHAKWILDTDTFNEWMNEEDYEVTDEKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNY
KKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVT
LPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENSAGNKGEQAKNPDLHEDN
VTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLN
PQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLAD
TPSGLVPLQPKTPQGRQSDGDAKAGRKSKEIEDLVPEAVKAKPELQTSASQQMLSFPDKG
KEKPTDLQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSE
HVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVD
PRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTS
DEPERIGEGGERGSFRALAREAPAISPPSDAAPGAASRKGNERRGEEPQETRAGLASGLE
LTLNRLAQEESGADETRVDPQPADEKKELKEPREGGAEEEAKEKLGEAPKKEEEKGKEGD
SEKESEKGDGDSMAEKEKEPKDGQEEVPKDLAEAEGERKTKVERDIGEGNLSTAAAAALA
AAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQL
LADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQQPPPPLPPGSQPIPSSGAPLAPAAHSM
PMAQAPGAPTAASLVPQPSLAQTEQIGQAVPAAPGAPHTVPAQQGQTPAGPHAQPPFPGQ
QPSSQMLPGTVGVSSHPGVPDQGPPLQTDPIAPSTATPVPPTQ
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaacgtggagatgttcatgaccatcgagaaatccttggtgcagaacaactgc
ctggcccggcctaacatctttctgcaccaggagatcgaacccaagctgctgggcaagctg
aaggacattatcaagcggcaccaggggacggtcaccgaggatcggaacaacgcctcccat
gttgtctgcccggtccccggcaacctggaggaagaagaatgggttcgacctgtcatgaag
agagacaagcaggtccttctgcactggggctacttcccggacagctacgacacctggatc
cccgcgagtgaaatcgaagcttctgtcgaggacgcgcccaccccggagaagccccggaag
gtccacgccaagtggatcctcgacacggacaccttcaacgagtggatgaatgaggaagac
tacgaggtgaccgatgagaagagccccgtctcccgcaggaagaaaatctccgccaaaacg
ctcactgacgaagtgaacagccccgactcggaccggcgcgacaagaagggtgggaactac
aaaaagagaaagcgctcaccctcgccgtccccgaccccagaagccaagaagaagaacgcc
aagaaaggcccgtcgaccccgtacaccaagtccaagcgcgggcaccgcgaggaggaacag
gaggacctgacgaaggacatggacgagccctcccccgtccccaatgtggaggaggtcacg
ctgcccaaaacagtgaacaccaagaaggactcggagtctgcacccgtgaaggggggcacc
atgaccgacctggacgagcaggaggatgagagcatggagactgccggcaaggatgaggag
gaaaacagtgcggggaacaaaggggagcaggccaagaacccagacctgcacgaggacaat
gtgacggagcagactcaccatattatcatccccagctacgccgcctggttcgactacaac
agcgtccacgccatcgagcgcagagccctgcccgaattcttcaacggcaagaacaaatcc
aagacccccgaaatatacctggcttatcgcaacttcatgatcgacacctaccggctgaac
ccccaggagtacctgacctccaccgcctgccgccggaacctggctggggacgtctgcgcc
atcatgcgggtccacgccttcctggagcagtgggggctgatcaactaccaggtggacgca
gagagccggccaacccccatgggacctccccctacatcgcatttccatgtcctggccgac
accccctcgggactggtgccgctgcagcccaagacgccccagggtcgccagagcgacggt
gacgcaaaggccggccgcaagagcaaagaaatcgaagacctagtcccggaggcggtgaaa
gcgaagcccgagctgcagacctcggcctcccaacagatgctcagcttccccgacaagggc
aaggagaagccgacggacctgcagaacttcggcctgcgcacggacatgtacaccaaaaag
aacgtcccttccaagagcaaagctgccgccagcgccactcgagagtggacggagcaggag
acgctgctgctgctggaggccctggagatgtacaaggacgactggaacaaggtgtcggag
cacgtgggcagccgcacgcaggacgagtgtatcctccacttcctgcgcctgcccatcgag
gacccctacctggaggactcggaggcgtcgcttgggcccctggcctaccagcccatcccc
ttcagccagtcgggcaaccctgtcatgagcaccgtggccttcctggcatccgtcgtggac
ccccgcgtggcctccgcggcagccaagtctgctctcgaggagttctccaagatgaaggag
gaggtgcccacggcgcttgtggaagctcacgtccgcaaggtggaggaggcggccaaggtt
acgggcaaggccgacccggccttcgggctggagagcagcgggatcgcggggaccacgtcc
gacgagccggagagaataggtgaggggggcgagcgaggctccttccgcgccttggcccgt
gaggcgcccgccatctcgcctccgtcggacgctgctccgggcgcggcgagtaggaagggt
aatgagcgaagaggggaggagccacaggagaccagagcgggcctggcctccggtctggag
ctcaccctcaatcggctggctcaggaggagagcggcgctgacgagacgcgggtcgaccct
cagccggcggacgagaagaaggagctgaaggagccccgggaaggaggcgcggaggaggaa
gcgaaggagaagctgggcgaagcacccaagaaagaggaggagaaaggcaaagagggggac
agcgagaaggagtcggagaagggtgacggtgacagcatggccgagaaggagaaggagccg
aaggacggccaggaggaggtgcccaaggacctggccgaggcagaaggtgagaggaagacc
aaggtggagcgagacattggtgaagggaacctgtccaccgcggccgccgctgccttggct
gctgctgccgtgaaggccaagcacctggccgcagtggaggagcgcaagatcaagtccctg
gtggccctgctggtggagacccagatgaagaagctggagatcaagctgcgacactttgag
gagctggagaccatcatggaccgggagcgcgaggcactggagtaccagaggcagcagctc
ctggcagaccgacaggccttccacatggagcagctcaaatacgccgagatgcgcgcccgg
cagcagcacttccagcagatgcaccagcagcagcagcagcagccgcctccgcccctcccg
cccggctcccagcccatcccgtcctccggggctcccttagcgccagccgcccactccatg
cccatggcccaggccccaggggcaccgaccgcggccagcctggtgccccagcccagcctg
gctcaaacggaacagatcggccaggcggtgccggccgcgccgggggctccgcacacagta
ccagctcagcagggacagacccctgccggccctcacgcccagcctccgttccccggccag
cagccctcctctcagatgctccccgggacggttggagtgagctctcaccccggcgtgccc
gaccagggcccccctctgcagacggaccccatcgcacccagcacagccaccccggtcccg
cccacgcagtga
DBGET
integrated database retrieval system
