Chrysemys picta (western painted turtle): 101943110
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Entry
101943110 CDS
T04662
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X4
KO
K12821
pre-mRNA-processing factor 40
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101943110 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpic03041
]
101943110 (PRPF40A)
Spliceosome [BR:
cpic03041
]
Complex A
U1 snRNP components
U1 related factors
101943110 (PRPF40A)
Complex B
101943110 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
101943110
NCBI-ProteinID:
XP_005296522
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MSGGDSAAAAASPQPLPFSLPKPPPLMQLTPGDAVRPVASAADQSPKSSRLGGRPDWPGG
KPVSLLAPLLPPRGEPEPLMPFGPSSRQQLRGRLLGRCGGGGLLNPSMRPGGVDRGSLMM
GHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSMMPGMMMS
HMSQAHMQPTVPPGVNSMDTQVGTTPPGTQITHQIVCAAQQTTTTNSSINEDPSKQKSMW
TEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKE
SRWAKPKELEDLEAMIKAEENSSKPEESTPTSSAPAVATEITDTVTAAAATTTTTTSEVE
TAVATTAATAIPAVTAAPEAEASTVAAVVENESTVTTTAEEQVQQTTTTTTAAAAATTIA
TPVVQEQNAEAVTNTVEETSKQEASVDVAPKKEEEDTQPVKKTYTWNTKEEAKQAFKELL
KEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAK
ESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAK
QLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEH
IRALEKEEEEEKQKSLLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPTISSDI
RFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFLVEVNTTFEDFV
TVISSTKRATTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPP
IELDAVWEDIRDRFVKEPAFEDITLESERKRIFKDFIHVLEHECQHHHSKNKKHSKKSKK
HHRKRSRSRSGSESDDDDSHSKKKRQRSESRSVSDRSSSAESERSYKKSKKHKKKNKKRR
HKSDSPESDTEREKDKKEKERENEKDRPRQRSESKHKSPPKKRPGKDSGNWDTSGSELSE
GELEKQRRTLLEQLDEDQ
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggggactcggcggcggctgcggcctcccctcagccgctccccttctccttg
ccgaagccccctcccctcatgcagctgacgccgggggacgccgtccgccccgttgcctcc
gctgcggaccaatcgccgaagagttcccggttgggaggccgcccggattggccgggtggg
aagcctgtcagcctcctggccccgctgctcccgccccgcggtgagcccgagcctctaatg
ccctttggcccctcgtcgcggcagcaacttagagggaggcttcttggcaggtgtggcggg
gggggcctcctgaacccctcgatgaggccgggcggagtggatagaggatccctcatgatg
gggcacccaggcatgccgcattatccacctatgggaatgcacccaatgggccagagacca
ccgaatatgccaccagttccgcatggaatgatgcctcagatgatgcctccaatgggagga
ccaccaatggggcagatgccaggaatgatgcagtcaatgatgcctggaatgatgatgtct
catatgtcccaagcgcatatgcagcctactgtaccgccaggagtaaacagtatggacaca
caagtaggcactacacctcctggaacacagatcacacatcaaatagtttgcgcagcccag
caaaccaccacaaccaacagttctataaatgaagatccttctaaacagaaatctatgtgg
actgaacataaatcaccagatggaagaacttattattataatactgaaacaaaacaatct
acatgggagaagccagatgatctcaaaacacctgctgagcaattgttatctaaatgccct
tggaaagagtacaaatctgactctggaaagccttattactacaattcccaaacaaaagaa
tcacgctgggcaaaacccaaagagcttgaagatcttgaagcaatgattaaagctgaagaa
aacagcagtaaaccagaagaatcaactccaacatcttctgctccagctgttgcaacagaa
attacagataccgtcactgccgccgccgccaccaccaccaccaccaccagtgaggttgaa
actgccgtggctactactgcagccactgccattcctgctgtaacagctgctcctgaggct
gaagcatctacagtagctgctgttgtagaaaatgaaagtacagtaactacaacagctgag
gaacaagtgcagcaaactactactaccaccaccgccgctgccgctgccacaaccatcgcc
acccctgttgtacaagagcagaatgcagaagctgtcactaacactgtagaggaaacttct
aaacaggaggcttcagtggatgttgctcccaaaaaagaggaagaggacacccagccagtt
aaaaaaacatatacatggaatacgaaagaagaagcaaagcaagcatttaaagaactgttg
aaagaaaagcgtgtaccatccaatgcctcatgggagcaagctatgaaaatgatcattaat
gatcctagatacagtgcattggcaaagttgagtgaaaaaaagcaagcctttaatgcttac
aaagtccagacggagaaagaagaaaaagaagaagcaagatcaaaatacaaagaagctaaa
gaatcctttcaacgtttccttgaaaaccatgaaaagatgacatctacaacgagatacaaa
aaagctgaacaaatgtttggtgagatggaggtctggaatgcaatatcagaacgtgatcgt
cttgaaatttatgaagatgtcttgttctttctgtctaaaaaagaaaaggagcaagccaag
cagttacgaaagaggaattgggaggctttgaaaaacatattggacaacatggctaatgta
acatactctaccacttggtcggaggcccaacagtatctgatggacaatcctacatttgca
gaggatgaagaacttcagaatatggataaagaagatgcactgatttgttttgaagaacac
atcagggctttggaaaaagaagaggaagaagaaaaacagaagagtttgcttagggaaagg
cgacgacaacgtaaaaatagagaatcttttcagttatttttggatgaattacatgaacat
gggcagttacattcaatgtcttcctggatggagttgtacccaaccataagttctgacatc
agatttactaacatgcttggtcagcctgttttttcattaggatcaactgcacttgatctt
ttcaagttttatgttgaagatttgaaagcacgttaccatgatgaaaagaagataataaag
gacatcttaaaggataaaggatttctggttgaagtgaatactacttttgaagactttgtt
acggtcatcagttcaactaaaagagctaccactttagatgctggaaatatcaaactggct
ttcaatagtttgctggaaaaggcagaagcccgtgaacgtgagcgggagaaagaagaggct
cgcaaaatgaagcggaaagagtctgcattcaagagcatgttaaaacaagctacgccccca
attgaattggatgctgtctgggaagatatcagagatagatttgttaaggaaccagcattt
gaagacatcactctagaatctgaaagaaaaagaatctttaaagactttatacatgtacta
gagcacgagtgtcaacatcatcattcaaagaataagaaacattctaaaaagtctaaaaag
catcacagaaaacggtctcgctcccgttcgggctcagagtctgatgatgatgatagccat
tcaaagaagaagaggcaacgctcagaatctagatcagtttctgatcgttcttccagtgca
gaatctgagagaagttacaagaagtcaaaaaaacacaagaagaaaaacaaaaagaggaga
cacaagtctgattcaccagaatctgatactgaacgagaaaaggataaaaaagaaaaagag
agagagaatgaaaaggatagacctagacaaagatcggaatcaaagcataaatctcctcct
aaaaaacgtcctggaaaagattctggtaattgggatacatctgggagtgaactgagcgaa
ggggaattagaaaaacagagaagaaccctcttggaacaactggatgaagatcaataa
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