Chrysemys picta (western painted turtle): 101943303
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Entry
101943303 CDS
T04662
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
101943303 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpic01009
]
101943303 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpic04515
]
101943303 (PCDH20)
Protein phosphatases and associated proteins [BR:
cpic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101943303 (PCDH20)
Cell adhesion molecules [BR:
cpic04515
]
Cadherins
Protocadherins
101943303 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
101943303
NCBI-ProteinID:
XP_005297006
UniProt:
A0A8C3IWQ3
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MTAVSEGMNYQGTGRRSQALGASWLPRSRHRQLEMGHLRSAGRTTSHRNLQHLFLFLLFI
GPFNCFASYSRATELFYSLNEGLPAGVLIGSLAQDLRLHGVAAEGLPTRRGEPVLSFSLA
SQGLGGQYVSLDNRSGELHTSALQIDREALCLETGAGLSASLPAPSSEPCLLLLDVLVLP
QEHFRLVKVKISIRDVNDNAPRFPVPNMRLWVPENAPIDTRLAIEHPALDPDLGTNAVQT
YRLKDDYGVFTLDVEENESGERTPYLIVMGALDREDREEYVTLIIAEDGGTPPLLGSATL
TIGISDINDNCPQFSDSQLNVTVYGNSSAGTHVATIHAVDMDLGSNAQISYSYSQKVPQP
SRDLFHLDESTGAIKLSSKIDGDAPRLHRLTILANGPGCIPAVTTVLVSIIKVMLRPPEV
VPRFIANEVEGVVYLKELEPVNTPIAFFTIKDPDEKYKVDCFLDGNGPFKLSPYKPYNNE
YLLETTRPLDYEVQQLYEISVVAWNSEGFHVNKIIKVQVLDDNDNSPIFPQQLIELSIEE
NNAPNAFLTKLHATDADSGERGKVSYFLGPDAPSYFSLDKTTGVLTVSTQLDREEKEKYR
YTVKAIDSGLPPRESLATVTITVLDKNDNSPRFINKDFSFFVPENFPGFGEIGVISVTDA
DSGQNGWVALSVVNGSDIFVIDTGKGVLRAKVSLDREQQSSYVLWVEAVDGGDPALSSTA
KITILLLDINDNPPLVLFPQSNTSYLLVLPSTLPGSPITEVYAVDKDTGMNAVIAYSIIG
RRGPRPESFRIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLHSTIMVNLFVNDT
VSNESYIESLLRKEPDINIEEKEPQISIEPTHKKMESPSCVPTLVALSIISLGSITLVTG
MGIYICLRKGKKHHRADENLEVQIPLNGRIDLHMLEKKPMEISNI
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagtttcagagggaatgaactaccaagggactggcaggcgctcgcaagcccta
ggagcaagctggcttccgaggagcaggcaccggcagctggagatggggcacctacgcagc
gctgggcgcaccaccagccacagaaacctgcagcatttgttccttttcctgctcttcatc
ggccctttcaactgctttgccagttacagccgcgccaccgagctcttctacagtctcaac
gaggggctgccggccggggtgctcatcgggagcctggcacaggacctgcggctacatggg
gtggctgcggagggtctgccgacccgtcgtggggagcctgtgctctccttcagcctggcc
tcccaggggctgggtggccagtacgtgagcctggacaaccgctcgggggagctgcacacc
tcagccctgcagatcgaccgcgaggcgctgtgcctggagaccggcgctggcttatctgcc
tctctgccagcgccatcctcggagccctgcctgctgctgctggacgtgctggtgctgccc
caggagcacttccgcctggtgaaggtgaagatctccatccgtgatgtcaatgacaatgcg
ccacgattccccgtgcccaacatgcgcctctgggtacccgagaacgcccccatcgacacc
cgcctggccatagagcacccggccctcgaccctgacctgggcaccaatgcggtccagacc
taccgccttaaggacgactatggggtcttcaccctagatgtggaggagaatgagagtggg
gagaggaccccctacctgattgttatgggggctctggacagggaggacagggaggagtat
gtcaccctcatcatcgcggaggatggggggaccccgccgttactgggcagtgccaccctc
accattggcatcagcgacatcaacgacaactgcccccagttcagtgattcccaactcaac
gttaccgtctatgggaattccagtgcagggacacacgtggccaccatccacgcagttgac
atggacctgggatccaatgcccagatctcttactcttacagtcaaaaggtcccccagcca
tcaagagacttgttccatctggatgaaagtacaggagccatcaagctctctagtaagatc
gatggtgatgctccccggctccataggttgactatattggccaacggtcctggttgtatc
cctgctgtgaccactgtgcttgtgtccatcatcaaagtcatgttgagaccccctgaagtg
gtccctcgttttatagctaatgaagtagaaggtgtggtttacttgaaagaattggagcct
gttaacacaccgatagcattttttactataaaagacccagatgaaaaatataaagtggat
tgctttttggatggcaatgggccattcaaactgtcaccatacaaaccatacaataatgaa
tatttattagagactacaaggcctttagactatgaggtacagcagctctatgaaatatca
gtggttgcatggaactcagagggatttcatgtaaacaagataattaaagtacaggttctg
gacgataacgacaactcaccaattttccctcaacaattaatagaattatctattgaagaa
aataatgctcccaatgcttttttgaccaaattgcatgcaacggatgctgacagtggagag
agagggaaagtgtcctattttctagggcctgatgccccttcatatttttctttagataaa
actacaggtgttcttacagtttccactcagctggacagagaagaaaaagagaaatacaga
tatactgttaaagcaatagattctggattgcctcccagagaatcgctagcaactgtcacc
atcacagttttggataaaaatgacaatagtcctagatttatcaataaggatttcagtttt
tttgtaccagaaaactttccaggttttggggaaattggagttatcagtgttacagatgct
gattcagggcaaaatggatgggtagccctttcagttgtaaatggaagtgatatttttgtg
atagatactggcaaaggagttttgagagctaaggtctccctcgacagggagcagcaaagt
tcctatgtcttgtgggttgaagctgttgatggaggtgatcctgccctttcttctactgcc
aaaataactatccttcttctggacattaatgacaaccccccactggtcttgtttcctcag
tctaatacatcttatttgttggtacttccttctactcttcctggctctcccatcacagaa
gtctatgctgtagataaagacactggcatgaatgctgtcatagcttacagcatcataggt
agaagaggtccacggcctgaatcatttaggattgaccctaaaactggtaatatcaccttg
gaagagtcactgatgcagaatgactatggtctctaccggctactcgtaaaagttagcgat
catggctatccagagcccctccattccacaatcatggtgaacctttttgtcaatgacaca
gtgagcaatgaaagctatattgaaagtttgttaagaaaggaacctgacattaatatagag
gaaaaagagccacaaatatctatagagcctacgcataaaaaaatggagtcaccatcttgc
gtgcctaccttagtagccctgtcaataataagcttgggctcaatcactttagtaactggg
atgggcatttacatctgtttacggaaagggaaaaagcatcacagagcagatgaaaatttg
gaagtacaaatcccactaaatggaagaattgaccttcatatgttggagaagaaaccaatg
gagatttctaatatttga
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