Chrysemys picta (western painted turtle): 101943537
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Entry
101943537 CDS
T04662
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101943537 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpic03041
]
101943537 (DHX38)
Enzymes [BR:
cpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101943537 (DHX38)
Spliceosome [BR:
cpic03041
]
Complex C
Other components
Step II factors
101943537 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
T2SSE
nSTAND3
PhoH
AAA_30
Flavi_DEAD
Microtub_bd
SRP54
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
101943537
NCBI-ProteinID:
XP_005310279
UniProt:
A0A8C3IU50
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MEDVPEDTSMHRLEGADLETQVGGLIIKKKSACSEQHVFKAPAPRTSLLGLDLLAAQKRR
EREEKEDAEDKKKSKVSSYKDWEEAKDDLGGSEEEGSDRASRSSRQDRHYRSAHVETPSH
TGGVSEEFWERSRQRERERREHGVYASSKEEKEHKRGRNRERDHDRKRDREERDRSRHSS
SRSEKDGSSERGSSRRGEPESPRHRPKDAATPSRSSWEEEDCGYGSSRRSQWESPSPTPS
YRDSERDRSHRASSARDADRRDRDRSVKSKYPDETPLPTPSYKYNEWADDRRHLGATPRL
SRGKGRREDAEEGISFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEEYVKK
REQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDNAAKVHLLVH
NLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKKAQHKHWEL
AGTKLGDIMGIKKEEEPDQTLTEDGKVDYRTEQKFADHMKEKSEASSEFAKKKSIVEQRQ
YLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAA
MSVAKRVSEEMGVSLGEEVGYAIRFEDCTSENTVIKYMTDGILLRESLREADLDHYSAII
MDEAHERSLNTDVLFGLLREVVARRADLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFP
VDVLFSKTPQEDYVEAAVKQALQVHLSGAPGDILIFMPGQEDIEVASEQIVEHLEELEKA
PALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKV
FNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTN
LANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGAMDNTGGLTSTGRLMVEFP
LDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLT
YLNVYLQWKNNSYSMLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGSDWDIVR
KCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYM
QCVTSVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREEQ
ERRNPLGSVRSLKIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgtccctgaggacacttcgatgcaccggctggaaggagctgatctggagaca
caggttggaggcttgatcatcaagaagaaaagtgcctgcagcgagcagcatgtcttcaaa
gctccagccccccgcacctcactgctggggttggacttgctggctgcgcagaaacgcagg
gagcgagaggagaaggaagacgcagaggacaagaagaagtccaaagtctcctcctacaaa
gattgggaggaggccaaagatgacttgggaggctctgaggaggaggggagcgacagggcc
agcaggagcagccggcaggacaggcattaccgctctgcccacgtggagacgccatcccac
acggggggcgtcagcgaggagttctgggagcgcagccggcagcgggagcgggaacggcga
gagcacggcgtctacgcctcttccaaggaggagaaggagcacaagcgggggcgcaataga
gagcgggaccacgaccgcaaacgggaccgagaggagcgggacaggagccgtcatagcagc
agccggtcagagaaggatggctcgtcagagaggggcagcagcaggaggggcgaaccagag
agccccagacaccgacctaaggatgcagccacgccatctcgctcgagctgggaggaagag
gactgcggctatggcagctcccggcgctcgcagtgggagtcgccctccccgacgccttcc
tatagggactccgagcgcgaccgcagccatcgagcatcctccgctcgtgatgcagacagg
agggaccgggacaggtcagtgaagagcaagtacccggatgagacaccgttgcccacccct
tcctacaaatacaatgaatgggctgatgaccggaggcacctgggggccacgccacggctt
tccaggggcaaagggaggcgtgaagatgcagaagagggtatttcctttgagacagaggag
gagcggcagcagtgggaggacgaccaacggcaagccgaccgggactggtacatgatggat
gagggttatgacgagttccacaaccccttggcctactcgtctgaggagtacgtgaagaag
cgggagcagcacttgcacaagcagaagcagaagcgcatctctgcacagcggaggcagatc
aatgaggacaatgagcgctgggagaccaatcgcatgttgacaagcggggtggtccatcgg
ctagaggtggatgaggactttgaggaagataacgcagccaaagtgcacctgctggtgcac
aacttggtgcccccattcttggatgggaggatcgtcttcaccaagcagccagagccagtc
atcccggtcaaggatgccacttcggatttggcgatcatcgcccgcaaaggcagccagctg
gtgcgcaaacacagggaacagaaggaacgcaagaaggctcagcacaagcactgggagctg
gctggcaccaaactgggagacattatgggcatcaagaaagaggaggagccagaccagact
ctgacagaagatggcaaggtggattacaggacagagcagaagtttgctgatcacatgaag
gagaagagtgaggccagcagcgagtttgctaagaagaagtcgattgtggagcagaggcag
tatctgcccatctttgctgtgcagcaggagctgctcaccatcatcagggataacagcatt
gtcattgtggtgggggagactggaagtggcaagaccacccagctgactcagtacctgcat
gaggacggctacaccgactacggcatgatcggctgcacccagccccgcagagtggctgcc
atgtcggtagccaagcgggtcagcgaggagatgggcgtgagcctgggagaagaggtgggc
tatgccatccgctttgaggactgcacgtcagagaacacagtcatcaagtacatgacggac
gggatcctgctgcgggagtccctgcgtgaggccgacctggaccattacagcgccatcatc
atggacgaggcacacgagcgctcgctcaacacggacgtgctcttcggcctgctgcgggag
gtggtggcgcggcgcgcggacctgaagctcatcgtcacctcggccaccatggatgcagag
aagtttgcctccttctttgggaacgttcccatcttccacattcctggccgcaccttccct
gtggatgtcctgttcagcaagaccccgcaggaggactacgtggaggctgcggtgaagcag
gccctgcaggtgcatctgtctggagcccctggagacatcctcatcttcatgccgggccag
gaggacatcgaggtggcctcggagcagatcgtggagcatctggaggaactggaaaaggcc
ccagctctggctgtgctgcccatctactctcagctgccctctgacctgcaggccaagatc
ttccagaaggctccggacggtgtcaggaaatgcattgtcgccaccaacattgcggagacc
tcgctgactgtggacggcatcatgtttgtcattgactccggctactgcaagctgaaggtc
ttcaacccccgcatagggatggacgccctgcagatctaccccatcagccaagccaacgcc
aaccagaggtcgggtcgcgctggccggacgggcccaggtcagtgcttcaggctctacacc
cagagcgcctacaagaatgagctgctgaccaccacggtgcccgagatccagcgcaccaac
ctggccaacgtggtgctgctgctcaagtctctgggcgtgcaggacctgctgcagttccac
ttcatggacccgccccctgaggacaacatgctgaactccatgtaccagctgtggattttg
ggagccatggacaacacgggtggcctgacctcaacggggcgcttgatggtggagttcccg
ctggacccggcgctctccaagatgctcattgtctcctgtgacatgggctgcagctccgag
atcctgctcatcgtctccatgctctctgtgcctgccatcttctaccggcccaagggccgg
gaggaagagagcgaccaggtgcgggagaagtttgctgtaccggagagcgatcacctgacc
tacctgaacgtttacctgcagtggaaaaacaacagctactccatgctgtggtgtaaccag
cacttcatccacgccaaggccatgaggaaggtgcgggaggtgcgtgcccagttgaaggac
atcatggtgcagcagcgcatgagcctggcgtcctgcggctcagactgggacatcgtcagg
aagtgcatctgtgccgcctacttccaccaggctgccaagctgaagggcatcggggagtat
gtgaacatccgcactggcatgccctgccacctgcaccccaccagctctctctttggcatg
ggctacactccagactacattgtgtatcatgagctggtcatgaccaccaaggagtacatg
cagtgtgtcacgtccgtggatggagagtggctagcggagctgggccccatgttctacagc
atcaagcatgcagggaagtcgcgccaggagaaccgccgtcgggccaaggaggaggtgtcg
gccatggaggaggagatggctctggctgaggagcagctgcgagcgcgccgggaagagcag
gagcgccgcaaccccctgggcagcgtgaggtctttgaagatctatactccggggcgaaag
gagcagggggagcccatgacgccgcgccgcactcctgcccgcttcggcctgtga
DBGET
integrated database retrieval system
