Chrysemys picta (western painted turtle): 101943713
Help
Entry
101943713 CDS
T04662
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X2
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101943713 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpic04040
]
101943713 (SCN8A)
Ion channels [BR:
cpic04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101943713 (SCN8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
ATP-synt_B
GPHH
Lustrin_cystein
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
101943713
NCBI-ProteinID:
XP_008172073
LinkDB
All DBs
Position
Unknown
AA seq
1988 aa
AA seq
DB search
MAAQLLAPPGPDSFKPFTPESLANIEKRIAEEKKKRPKQDSSHRDDDDDSKPKPNSDLEA
GKNLPFIYGDIPKGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILTPFNLL
RRIAIKILIHSLFSMIIMATILTNCVFMTFSNPPEWSKNVEYSFTGIYTFESLVKIIARG
FCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINLNESFLENGTRGFD
WQEYTNNVSNFYTIPGALDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFL
ALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQAT
LEEAEQKEAEFKAMLEQLKRQQEDAQAAAMATSAGTVSEDAVEDDGRGRGSRSSSEISKL
SSKSDKERRNRRKKRKQKELLEGEEKGDNEKVFKSESEDGMRRKTFRLPDNRLGRKFSIM
NQSLLSIPGSPFLSRHNSKSSIFSFRGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPF
RGRERRSSYSGYSGYSQGSRSSRIFPSIRRNVKRNSTVDCNGVVSLIGGPASNRPMGRLL
PEVKINKAATDDSGTTEVEIKKKPTGSLLVSMDQLNASYGRKDRTNSIMTVVTNTLVEEL
EESQRKCPPCWYRFANTFLIWECHPHWIRLKEIVNMIVMDPFVDLAITICIVLNTLFMAM
EHHPMTPEFQDVLTVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMEL
GLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVV
GMQLFGKSYKECVCKINVECVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAM
CLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQIAVIRIKQGIAWIK
AKAHEFMQAHFKQREGDEVKPLDELYEKKVNCIANHTGADINRDVDYQKNGNGTTSGIGS
SVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPNGSKEKLDDTSSS
EGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCVQRFKCCQVSIEDGLGKSWWTLRKTCF
LIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTMLEYADKVFTYIFILEMLLKWC
AYGFVKFFTNAWCWLDFLIVAVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEG
MRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFDIEIVNN
RTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQIATFKGWMDIMYAAVDSRKQEEQP
KYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNSIQGAVFDFVTQQAFDIFIMMLICFNMVTMMVETDTQSNRMSD
ILWWINLVFVILFTCECVLKMFALRHYYFTIGWNIFDFVVVILSVVGMFLADIIEKYFVS
PTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN
FAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSSF
KGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIW
EKFDPDATQFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFT
KRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEDVSAVVIQRAYRVRLAK
RGFICRKSASTKLENGGTNREKKEGTPSTASLPSYDSVTKPEKEKQLRVEEGRRERAKRQ
KDLKESKC
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcagctgctcgcaccaccaggccctgatagttttaaacctttcaccccagag
tctctggctaacattgagaagcgcattgcagaggaaaagaagaagcgtccaaagcaagac
agcagccatcgggatgacgacgacgacagcaaaccaaaaccgaacagtgacctggaggca
gggaaaaatctgcctttcatctatggggacatcccgaaaggtctggttgctgtaccactg
gaggactttgacccgtattatttgacccagaaaacctttgtagtactaaacagagggaaa
acactcttccgatttagtgccacacctgccttgtacattttaactccttttaatctgctt
aggagaatagctattaaaattttgatacattcattatttagcatgatcattatggccact
attttgaccaactgtgtattcatgacttttagtaacccacctgaatggtcgaagaatgtg
gagtactcattcactggtatttatacatttgaatcacttgtgaaaataattgcaagaggt
ttctgcatagatggttttactttccttcgcgatccatggaactggctagatttcagtgtc
atcatgatggcgtatataacagagtttgtaaacctaggcaatgtttcagctctgcgcact
ttcagggttctgagagctttgaaaactatttctgtaattccaggcttgaagaccattgtg
ggtgccctaattcagtctgtgaagaaactgtcagatgtaatgattttgacagtgttttgc
ctcagtgtctttgctttaatcggcctgcagctgtttatgggcaatttgaggaacaagtgt
gtaatatggccaattaacctcaatgagagcttcctagagaatggcaccagggggtttgac
tggcaagaatacaccaacaatgtctcaaacttttacacaatccctggggcccttgatcct
ctgctctgtggtaacagctcagatgcaggccaatgtccagagggttacacatgcatgaaa
gcaggaaggaatccaaactatggctacacaagctttgacactttcagctgggctttccta
gccttatttcgccttatgactcaggatttttgggaaaacttgtatcagttaactttgcga
gcagcaggaaaaacttacatgatattctttgtcctggttatctttgtggggtcattctat
ctggtcaatctgatcttggctgtggtagccatggcttatgaagagcagaaccaggccaca
ctggaggaagcggagcaaaaggaagcagaattcaaggccatgttggaacagctgaaaagg
cagcaggaagacgcacaggctgctgccatggccacttcggcagggacagtctcagaagat
gctgtggaggatgatggcagggggagagggtctcggagctcttctgagatttccaaactc
agttctaagagtgacaaggagcggcggaacaggaggaagaaacggaagcagaaggagctg
ttggaaggagaggagaagggtgacaacgaaaaggtgttcaagtctgaatcggaggatgga
atgaggagaaagacttttaggctgccagacaacaggctgggaaggaaattttccatcatg
aaccagtcccttctcagcatcccaggctccccgttcctctcccggcacaacagcaagagc
agcatcttcagcttcagagggcgcttccgtgatccaggttcagagaacgaatttgctgat
gacgagcacagcacggtggaggagagcgaaggcaggagagattcccttttcatccccttc
cgtggccgggaacggagaagcagctacagcggctacagtggctacagccagggcagccgg
tcctcacggatctttcccagcatccgccggaacgtgaaaaggaatagcacagtggattgt
aatggcgtggtgtcccttattggcggcccagcatccaataggcccatgggacgccttctg
cctgaggtgaaaataaataaggcagctaccgatgacagtggtactaccgaggtggaaatt
aaaaagaaacctaccgggtctctcttggtctcaatggatcaactgaatgcatcctatgga
agaaaggatcgaaccaacagtataatgactgttgtaactaatacccttgtagaagagttg
gaagagtcccagaggaagtgtcccccctgttggtacagatttgccaacaccttcctgatc
tgggagtgccacccacattggatcaggctgaaggagatagtgaacatgattgtcatggat
ccctttgtcgacctggccattaccatctgtattgtgctgaacactttgtttatggcgatg
gaacaccatcccatgacccctgagtttcaagacgttctgactgtaggaaatctggttttc
actggaattttcacagcagaaatgttcctgaagctcatagccatggacccctactattat
ttccaagaaggttggaacatttttgacggatttattgtctccctcagtttaatggaactg
ggtctagcagacgtggaagggctttcagtgctgcgatctttccgattgctgagagtcttc
aagctggcgaagtcctggcccactctgaacatgctgataaaaatcattggtaactcagtg
ggtgccttgggaaacctgaccttggtgctggccatcatcgtgttcatctttgctgtggtg
ggcatgcagctctttggcaagagctacaaggaatgtgtctgcaagatcaacgtggagtgt
gtgctgccccgatggcacatgcacgatttcttccactccttccttattgtcttccgtgtg
ctgtgtggggagtggattgagactatgtgggattgtatggaagtggcaggacaggccatg
tgcttgattgtcttcatgatggtcatggtcatcgggaatttggtggtgttgaacctgttc
ttggccttgctgctgagctctttcagtgcagataacttagcagcgactgatgatgatggg
gagatgaacaacctacaaatagcagtcattcgcatcaagcagggaatcgcctggatcaag
gcgaaagcacatgagttcatgcaagcgcatttcaagcagagagagggggatgaggtcaaa
cccttggatgagttgtatgaaaagaaggtgaactgcatcgctaaccacacaggggctgat
atcaacagggacgttgattatcaaaagaatggcaatggcaccaccagtgggattgggagc
agtgtggagaaatacatcatagacgaagaccacatgtcctttatcaataatcccaatctc
accgttcgggtacccattgccgtgggtgagtcagacttcgaaaacctcaacacagaagac
ttcagcagtgatacagatcccaatggcagcaaggagaaactggatgataccagctcttct
gagggcagcaccattgatataaagccagaggtagaggaagtccctgtggaggcaccagaa
gaatatctggacccagatgcatgcttcacagaaggttgtgtgcagcgctttaagtgctgt
caggtcagtattgaagatgggctgggcaaatcctggtggaccttgaggaagacctgcttt
ctgattgtggagcacaactggttcgagactttcatcatcttcatgatcctattgagcagt
ggagccctggcctttgaggatatttacatagaacagagaaagaccatccggaccatgctg
gagtacgcagacaaggtcttcacctatattttcattctggagatgttgctgaaatggtgc
gcctacggattcgtcaagttcttcaccaatgcctggtgctggctggatttcctcattgtg
gctgtctctttagtcagccttgtagctaatgccctgggctactcggaactaggtgccata
aagtcccttaggacactaagagctttgaggcctttaagagcgttgtcccgatttgagggg
atgagggtggttgtcaacgccctggttggcgctatcccttccattatgaatgtgttgttg
gtctgccttatcttctggctgattttcagcattatgggggttaacctgtttgctgggaaa
taccattactgctttaacgagacatctgaggagcgcttcgacatagagatagttaacaac
aggaccgattgtgaagcattgatgccacccaactccactgagatccgatggaagaatgtg
aaaattaactttgacaatgttggggcaggatacctggctcttctccaaattgctactttc
aagggctggatggatatcatgtatgcagcagtagattccagaaagcaagaagagcaaccc
aagtacgaggacaacatctacatgtacatctactttgtaatcttcatcatctttggctcc
tttttcaccctgaacttgtttatcggtgtcatcattgataacttcaatcaacaaaagaaa
aagtttggaggtcaggatattttcatgacagaagagcaaaagaaatactacaatgccatg
aaaaaactgggctcaaagaaacctcagaaacctattccccggcctctgaacagcatccaa
ggagcggtctttgactttgtcactcagcaagcattcgatatattcatcatgatgctcatc
tgcttcaacatggtgaccatgatggtggaaacagacacacagagtaaccggatgtcagac
atcctgtggtggatcaacctggtgtttgtcatcctcttcacctgtgagtgcgtgctgaag
atgtttgccttgcgacactattatttcaccattggatggaacatttttgacttcgtggtt
gtgattctgtccgttgtgggaatgttcctggctgatatcattgagaagtattttgtgtca
cccactctcttccgagtcatccgactggcccgtattggccgcatcctgcgtctgatcaaa
ggggccaaggggatccgcaccctgctttttgccttaatgatgtccttgcctgccttgttc
aacatcggcctcttgctgttcctggtcatgtttattttctccatctttggcatgtcgaac
ttcgcctacgtaaagcatgaggccggcatagacgacatgttcaactttgagaccttcggc
aacagcatgatctgtttgttccagatcaccacctcggctggctgggatggcttgctgttg
cctatcctgaaccggccgccggactgcgacctagataaggagcatcccgggagcagcttc
aagggagattgtggtaacccctccgtggggatctttttcttcgtcagctacatcatcatc
tcctttctgattgtggtgaacatgtacatcgctattattctggagaacttcagtgtggcc
acggaggagagtgctgacccgctgagtgaggacgacttcgaaaccttctatgagatctgg
gagaagtttgaccctgatgccacacagttcattgagtactgcaagctggcagactttgcc
gatgctttggagcacccactccgtgtccctaagcctaacactattgaactcatcgccatg
gacttgcctatggtaagcggggacagaatccactgcctggacatcctgtttgccttcacc
aagcgtgtgctgggggacagtggggagctggacatcctgaggcagcagatggaagaaagg
tttgtggcgtctaacccttccaaagtgtcttatgagcccatcacgaccacactccggcgc
aagcaggaagacgtctcggcagtggttatccaacgggcttacagggttcgcttagcaaaa
aggggctttatttgcaggaagtctgcctctactaagctggaaaacggaggaacaaatcgg
gagaaaaaagaaggcaccccatccaccgcatccctcccatcctatgacagtgtaactaaa
cctgaaaaggagaaacagctgcgggtggaggaaggaagacgagaacgagcaaaaagacaa
aaagatttaaaggaatccaagtgttga
DBGET
integrated database retrieval system
