Chrysemys picta (western painted turtle): 101943961
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Entry
101943961 CDS
T04662
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101943961 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpic03021
]
101943961 (TAF5)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101943961 (TAF5)
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101943961 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
101943961 (TAF5)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101943961 (TAF5)
STAGA complex
101943961 (TAF5)
TFTC complex
101943961 (TAF5)
SAGA complex
101943961 (TAF5)
SLIK complex
101943961 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
eIF2A
RAB3GAP2_N
LisH_TPL
VID27
Motif
Other DBs
NCBI-GeneID:
101943961
NCBI-ProteinID:
XP_008177989
UniProt:
A0A8C3IMA8
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MAALPEEPAEVVVKPDPDGGVPPQPQPPPAPPPAAPPTTAPAEGEAAAGAPGSGGEAAPP
KPAPPGPAASPAPTDRQTLLAVLQFLRRNNLHESEDILRREARLLGEEVAAAALSPAGPG
AQGTPGGETDATGGEALLSRVAAASGAAGGGVAAGASAAPGGAAVVAPPPGKVGGGVPVE
DQPDVSAVLSAYKQQGDPALYEEYYSGLKHFIECALDCHRAELSQLFYPLFVHMYLELVY
NQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDS
YQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVF
FGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKRESMGSKSKKQDPNAPPQTRIPLPELK
DSDKLDKIMNMKEATKRVRLGPECLPSICFYTFLNAYQGLTAVDVTDDSSMIVGGFADST
VRVWSVTPKKLRSVKSAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSP
DRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWA
TDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIH
SLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVYALRFSRDGEILASGSMDN
TVRLWDAVKVFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVIHLHFTRRNLLLA
SGAYSPQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctacctgaggagccggctgaagtggtggtgaagccggacccggacgggggt
gtcccgccccagccccagccccctccggctcccccgcccgccgctccccccaccacggcg
ccggcggagggggaggcggcggcgggggccccggggagcggaggggaggccgctcccccc
aagccggccccccccggtccggccgcctcccccgcccccacggaccggcagaccctcctg
gccgtgctccagttcctgcgtcgcaacaacctccacgagtccgaggacatcctgcgccgg
gaggcccggctgctgggggaggaggtggccgcggctgccctcagccccgcgggacccggc
gcccaggggaccccgggtggggagacagacgccaccgggggcgaggcgctgctcagccgg
gtcgccgccgcctctggagcggccggagggggcgtcgctgctggtgcctctgcagccccc
ggcggcgccgctgtagtcgcgccgccgccagggaaagttggaggaggtgttcctgtagaa
gatcagccagatgtgagtgcagtgttgtctgcctacaaacagcagggggacccagcgctg
tacgaggaatactacagtggactgaagcactttattgagtgtgccctagactgtcatcgg
gctgaattatcccagttgttttatcctctctttgtgcatatgtatttggaattggtctac
aaccagcatgagaatgaagcaaagtctttctttgaaaagtttcatggggatcaagagtgt
tattaccaggatgacctgcgtgtattatctagtttaaccaaaaaggagcacatgaaaggg
aacgagaccatgctggatttccgaacaagcaagtttgtgctgcgcatttctcgtgactct
taccaactcttgaagagacatcttcaggaaaaacagaacaatcaaatctggaacattgtt
caggagcatctgtacattgatatctttgatggaatgcctcgcagtaaacaacagatagat
gctatggtgggaagcttggcaggggaggctaaaagggaggctaataaagcaaaggttttc
tttggcttattaaaagaaccagagattgaggtgcctttggatgatgaagatgaagagggg
gagaatgaggaaggaaaaccaaaaaagaaaaaacctaaaagggagagcatgggatcaaaa
agtaaaaagcaagaccctaatgctcctccacaaaccagaattcctcttcctgaactgaaa
gactcggacaagctggataaaataatgaatatgaaggaagccacaaaacgtgtgcgtctt
ggtccagaatgtttgccttccatctgtttctacacattccttaatgcctatcagggtctt
actgcagtggatgtcactgatgactctagcatgattgtaggaggctttgctgactccact
gtaagagtatggtctgtgacaccaaaaaagctacgcagcgtgaaatcagcagcagatctc
agtctcatagacaaagaatcagatgatgtcttggagaggatcatggatgagaaaacagca
agcgagctgaagattttatatggtcacagcggacctgtctatggtaccagcttcagtcct
gataggaactacctcttgtcctgttcagaggatggcactgtcagattgtggagccttcaa
acattcacttgcctcgtgggatataaaggacacaactatccagtgtgggatacacagttc
tctccctatggatattactttgtatcaggtggacatgacagagtggctcgtctgtgggct
acggatcactatcagcctttacgaatatttgctggccatcttgctgatgtcacatgtacc
cggtttcaccccaactccaactatattgccacgggctcagcagacaggactgtacgactc
tgggatgttctgaacgggaactgtgtaagaatcttcactggacataagggaccaattcat
tcattggcattttctcctaatggacgattcctggccactggagcaacggatggaagagtg
cttctgtgggatattggccatggtttgatggtgggagagttgaaagggcacactgataca
gtctatgcactcagattcagtagagatggggaaattttagcatccggttcaatggataac
acagtccggctgtgggatgctgtgaaagtatttgaagacttagaaactgatgattttact
acagccactggacatataaatctgcctgaaaactcacaggacttgctgttgggtacatac
atgaccaaatcaactccagtcatacacctccattttacccgcagaaacttgctactagct
tcaggagcatatagtccacaataa
DBGET
integrated database retrieval system
