Chrysemys picta (western painted turtle): 101944039
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Entry
101944039 CDS
T04662
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X2
KO
K16498
protocadherin delta 1
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
101944039 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpic01009
]
101944039 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpic04515
]
101944039 (PCDH9)
Protein phosphatases and associated proteins [BR:
cpic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101944039 (PCDH9)
Cell adhesion molecules [BR:
cpic04515
]
Cadherins
Protocadherins
101944039 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
MAP17
V_ATPase_I
RCR
EphA2_TM
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
101944039
NCBI-ProteinID:
XP_005297007
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTST
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNKIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDIGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADVGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAIDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPALTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFH
LPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSD
GPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGPYQQPKSPLSTFAPQKEWVKKDKLV
NGHTLTRTWKEDSNRNQFSDRKQYGSGEGHFNTGNHMTDIPLANLKSYKQASGPAESPKE
HQL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattca
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaatgtacccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagcacc
agccttgtctacagactggtttctaaagcaggggatgcccctttggtcaaagtgtccagc
accaccggggaaatcttcaccacgtctaataaaatagacagagaaaaactctgtgctgga
gcctcctatgctgaagaaaatgagtgtttttttgaacttgaagtggtgattctccccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaagataccaatgacaatgcacct
atgtttccatcccctgtcatcaatatttccatacctgaaaacacgttgatcaacagccgc
tttccaattccatcagcaactgatccggacattggtttcaacggtgtacagcactatgaa
ctgttaaatgggcagagtgtctttggattggatattgttgaaactccggaaggagagaaa
tggcctcaactgatcgtacagcaaaacttggatagagagcagaaggacacctatgtgatg
aaaatcaaagtagaggatggaggaacccctcagaaatccagcacagccatactgcaagtc
acagtaagtgatgtcaatgataacaggccagttttcaaagagagtcaggtggaggttcac
ataccagagaatgccccagtaggcacctctgtaattcagcttcatgctacagatgcagat
gtaggaagcaatgcagaaatcagatatatttttggtgcccaagttgcccctgcaaccaaa
aggctctttgctttaaataacacaacagggctgattacagtgcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggccagtgacggtagctctactcctgct
cgggcaactgttaccatcaacgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacattataagtcccatcaatggcacagtatacttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaatggcaaagtgatc
tgttttattgagagagaggtcccatttcacttgaaggcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccaattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgtcgtggtctatacttaacaactattagtgccacagacgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag
acgggagttttgacagcctccagagtttttgacagagaagagcaagaacgtttcattttc
actgtaacagcaagggacaacggcacccctcctctgcagagtcaagcggctgtaattgtt
actgtgctggatgaaaatgacaacagtcccaaatttactcataatcactttcagtttttt
gtatctgagaacttaccaaagtatagcactgtgggagtgatcacagtgaccgatgcagat
gcaggggaaaataaagcagtgaccctttccatcctgaatgataatgagaactttgtgctg
gatccttactctggagttataaagtccaatgtttcttttgatcgagaacagcagagctcg
tacacctttgacgtcaaggccattgatggaggacaacctcctcgctcttctacagcgaaa
gtaacaataaatgtcatggacgttaatgataacagcccagttgtcatctacccaccttct
aatacttcttttaagttggtgccactctcagcaatcccaggctctgtcgtagcagaagta
tttgctgtggatatagacactggaatgaatgctgaacttaaatatacaattgtaagtgga
aataacaaaggtttatttcgtattgatccagtgacaggtaatattactctggaagaaaaa
ccagctcttactgatgtggggctgcatcgtttagtggtcaacataagtgacttgggttat
cctaaatccttgcatactcttgtgcttgtatttttgtatgtaaatgacactgctggaaat
gcctcttatatttatgacttgatacgtaggactatggaaacacccttggaccggaacata
ggggacagtagccaaccctatcaaaatgaggactatcttactatcatgattgctatagtg
gcaggtgctatggttgtgatagtggtgatatttgtcacggttctggttcgctgtcgacat
gcatctaggttcaaagcggcacaaaggagcaagcaaggtgctgaatggatgtctcccaat
caggagaacaaacagaacaagaaaaagaaaaggaagaaaaggaagtctcctaaaagttct
cttttgaactttgttaccattgaggagtcgaaacctgatgatgctgttcatgaacctatc
aacgggacaataagccttccagctgagctggaggagcaaagtataggaagatttgactgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgctaagcattacaaa
tctgcctctccacagtctgcttttcatcttaaacctgacactccagtatcagtgaaaaag
catcatgtgattcaggaacttccgttggacaacacctttgttggtggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtcccagcgccgtgttacgtttcac
ctccctgatggctcccaggaaagctgcagtgacagtggtctaggagaccatgagcctgtg
ggtagtggaaccctgatctcacaccctctccctctggttcagccacaggacgaattctac
gaccaggcctctccggacaagaggactgaagctgatggcaactctgaccccaactctgat
gggcctcttggtccacgaggattagctgaagctacagagatgtgtactcaagaatgcctg
gttttgggtcattccgataactgttggatgcctcccagcctgggtccataccagcagcca
aagtctcctctctccacctttgcacctcagaaagaatgggttaagaaggacaaactagtg
aatggacacacgttgacaagaacctggaaagaagatagcaacagaaaccagttcagtgac
cgaaagcagtatggttctggtgagggccatttcaacactggcaatcacatgactgacatt
cctttggctaacttgaagtcttataaacaggcctcaggacctgctgagagtccaaaggag
caccagctataa
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integrated database retrieval system
