Chrysemys picta (western painted turtle): 101944072
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Entry
101944072 CDS
T04662
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101944072 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpic03041
]
101944072 (DDX5)
03009 Ribosome biogenesis [BR:
cpic03009
]
101944072 (DDX5)
Enzymes [BR:
cpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101944072 (DDX5)
Spliceosome [BR:
cpic03041
]
Complex A
U1 snRNP components
U1 related factors
101944072 (DDX5)
Complex B
101944072 (DDX5)
Ribosome biogenesis [BR:
cpic03009
]
Eukaryotic type
Pre-60S particles
Helicases
101944072 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
101944072
NCBI-ProteinID:
XP_005282960
UniProt:
A0A8C3FWT4
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MCMSVSVRVLFRYRNRCLCLEQKQTKKNLHSNPLTGMLSLGFITPHPRTHTGFLQSLTHA
GSVPSIPKALGLSCFLIVLFEPLENYERLSVWDVGYLVTRPHLLGPLWFGGPRFGGSRGG
PLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTVQEVEQYRASKEVTVKGH
TCPKPLINFYEANFPANVMEVIQAQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLS
YLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPK
GPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD
QIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDD
KLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEF
KHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTP
NNIKQVSDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRDRYSAGKRGGFGSFREREN
FERTYGAVGKRDFGAKAQNGGYSAQTYSNGTPFGNGFAAAGMQASFRAAGNPAGAYQNGY
DQQYATNIATMHNGMNQQQYAYPATGAAPMIGYPMPAGYTQ
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatgagcgtctcagtgcgagttttatttcgttaccgaaatcgatgcctttgttta
gaacaaaaacaaaccaaaaaaaatctccacagcaacccacttacgggaatgttgtctctg
ggttttataactccccacccacgcacacacaccggctttcttcagtctctgacgcacgct
gggagtgtcccttctattcccaaggcgttggggctgtcctgttttttaatcgttttgttt
gagcccttagaaaattatgagcgcctttcagtttgggatgttgggtatttggtaactaga
ccacacctgctgggacctttgtggtttggtggtcctcgttttggaggaagcagaggtgga
cctctatctggaaagaaatttggaaaccctggagaaaaacttacaaaaaagaaatggaac
ctagatgaactgcccaaatttgagaagaatttttatcaagagcatcctgatgtagttaga
cgcactgtgcaagaggttgaacagtacagagcaagcaaagaagttacagtgaagggccat
acctgtccaaaaccacttataaatttctatgaagctaactttcctgcaaatgttatggaa
gtaattcaggcacagaatttcactgaaccaactgctattcaagcacaaggatggcctgtt
gctttgagtggactggatatggttggagtagcacaaactggatcaggaaaaaccctgtct
tacttgttgcctgccatagtgcatataaatcatcagccattcctagagcgaggggatgga
cctatttgtctggtgctggcaccaactcgagaactggctcaacaagtgcagcaagtggct
gctgaatatagcagagcatgtcgtttgaagtctacttgtatttatggaggcgctccaaag
ggaccacaaattcgtgatttagaaagaggtgtggaaatctgcattgcaacacctggaaga
ctcatagactttttagaagctggaaagaccaatctcaggagatgtacttaccttgtactt
gatgaagctgacagaatgcttgacatgggatttgagcctcagatcagaaaaatagtagat
cagataaggcctgacaggcaaactctaatgtggagtgcaacatggcccaaagaagttcga
caacttgctgaagatttcttgaaagaatatgtacacatcaacattggggcattggaacta
agtgcgaaccacaacattcttcaaattgtggatgtctgtcatgatgtagagaaggatgac
aaacttattcggttgatggaagaaattatgagtgagaaagaaaacaaaaccattgtgttc
gtggaaaccaaaagacgatgtgatgatcttaccagaaaaatgagaagagatgggtggcca
gcaatgggtatccacggtgacaaaagccagcaggagcgagactgggttctaaatgaattc
aaacatggaaaagctcctatcctgattgctacagatgttgcatccagaggtctagatgtg
gaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggactatatccac
cgaattggacgaactgcccgcagtaccaaaacaggcacagcctacacattctttactcct
aacaatataaagcaagtaagcgacctcatctctgtgcttcgggaggctaatcaagctatc
aaccccaaattgcttcagttgattgaagacagaggttcaggtcgttcccgaggtgatcga
cgtgacagatattctgcgggcaaaaggggtggatttggtagttttagagagagagagaat
tttgagagaacttacggtgcagtaggaaagagagactttggagcaaaagcccaaaacggt
ggctacagtgctcaaacctacagtaatggaactccgtttggaaatggctttgcagctgct
ggcatgcaggctagcttcagagctgctggtaatcctgcaggagcttaccagaatggttat
gatcaacagtatgcaactaacattgcgactatgcacaatggtatgaaccaacagcagtat
gcatatcctgccactggtgctgctcctatgataggttacccaatgccagcaggttatact
caataa
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