Chrysemys picta (western painted turtle): 101944103
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Entry
101944103 CDS
T04662
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101944103 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpic03000
]
101944103 (ATRX)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101944103 (ATRX)
Transcription factors [BR:
cpic03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
101944103 (ATRX)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
101944103 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
101944103
NCBI-ProteinID:
XP_005291849
LinkDB
All DBs
Position
8:complement(38776627..38916865)
Genome browser
AA seq
2440 aa
AA seq
DB search
MTKIFGNVLGRPSFKMSESKLNTLVQKLHDFLAHSSEESEDANSPPRLSVSKSIGKSSGP
ENSPTPMENNREEGNSSSERSKSLGSSRSKRKPTVVTKYVGSDDEQTLPETVNEDVSNEN
SENDVDMKSLPKGTVVVQPEPVLNEDKDDFKGPEFRSRNIVKMKPEAPKKRGEEGLHGIV
SCTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNL
ICCDFCHNAFCKKCILRNLGRKELSAIMDENNQWHCYICHPEPLLDLVTACDSVFENLEQ
LLQQNKKKIRVESEKSKIYDHTLKFSPKRNISNCNGEEKKLDDSYSGSLTYSYKALMVPK
DMLKKTKKLVETTTNMNASFVSFLKTAAENSEINSTIQLRQLKAFKSVLSDIKKVHLALE
EGLNQEIQALDVKIKEKNTKEKKTDIKLEKNEVKRDEGKEHAELKEDTVKSVKKAVSEQP
DNEPMDQNVPATQRTENKNTSSEDKKSETNEEPQYEPNSTEALDMDIVSVPSSVPEDIFE
TLESAMETQSAADEQGNGSTATELETVNVNIKCATASKDIKGGTKLKAPAKVRKELFVKL
TPVSLSDSPVKAEDQDSNPVKGDQNADVIPKAENCDSGKENHYIGNERSPENETVPLVEE
SDLRRSPRVKTTPLRRQTDMNPLTSNSEEDSNDAYCEKRKQKSSTQSMRKKDKRNSSDNT
TDHPKPNKLSKSKKSDILDQSSDSDEMPAVLKEVAMMSHSSSDIDSNSETSNNIQKNALN
DRTKQPVKYENGKRKRKSSTSGSDLVAKKGKSTKGSTSAKKKRQNPSDSSNYDSELEREI
KSLSKIESAKKAKKKYPRKEENYDSSEEEQNKKGSTSKKKINLKKQQVESSDDAEKSSPE
KEETNHSSEDKKIRKGTAVNEKKNRDLKERTPKGKHDGSSDTEKSSLEKEESCHSSDGKK
RVEAKEKKNRNLKKRKVQNDSSLDGTEKSAAKEQSCDSSEDKTKNKKGTEGKENKKENSK
KKNKKEQDGSSSDGDKSSPEKKSGISSENKSKNEMAVEEKRERNLRERTLKKLQNDSSSD
AEKSPKKEESSSEDVKQNKKRIEAKEKKKVSHKKKTSKKEQNDSLSSSDEEPYEDNKKKS
KKSSAKENKKGNLKVEKRISKKQKDDITCSSSSDEEENDDQNSAIDGSSDEQKIKPVTES
LILSSNTGFCQSSGDEGETKSGAVPMEEEEDDDDPENRIAKKMLLEEIKANLSSDEDASS
DEESDEGKKKTGKKNENAEDDEENEKEDNSESDSDDEESRKPRYRHRLLRHKLSMSDGES
EEEKKGKSKDTKEGKRRNRRKVSSDDSDDSEFHESGVSEEVSESEDEQRPRTRSAKKAEA
EENQRSYKQKKKRRRIKVQEDSSSENNNKSNSEDEDDNDSKSPGKGRKKIRKILKDDKLR
TETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPIV
QVHRNIVTKLKPHQVDGVQFMWDCCCESVKKTKKSAGSGCILAHCMGLGKTLQVVSFLHT
VLLCDKLDFSTALVVCPLNTALNWLNEFEKWQEGLEDDEKLEVSELATVKRPQERSYMLQ
RWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVICDEGHILKNEASA
VSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCA
DSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLAVRMTSIQCKLYQYY
LDHLTGVGSSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSLDEF
IASDSDETSMSLSSDDYAKKKKPKGKKAKKESSSSGSGSDNDVEVIKVWNSRSRGGGEGN
TEELANNPPLAVKSDEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRM
AEELGDKVLVFSQSLISLDLIEDFLELASRDKTDKDKPVIYKGEGKWFRNIDYYRLDGST
TAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFR
VYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTF
EPDLLDDPNSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEE
RKAAWAEYEAEKKGLTMRFNMPAGTNMPPINFNSQTPYIPFNLGALSAMSNQQLEDLINQ
GREKVVEATNSVTAVRIQPLEDIISTIWKENLTLTETQVQALALSRQASQELDIKRREAI
YNDVLTKQQMLISCVQRILMNRRLQQQYNQQQQQQMSYQQAAMSHLMMPKPPNLIMNPST
YQQIDMRGMYQAVSGGMQPPPLQRAPPPMRGKNPGPSQGK
NT seq
7323 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagatatttggcaacgtcctagggaggccttcattcaaaatgagtgaaagcaag
ttgaatacgttggtgcagaagcttcatgactttttggctcactcatccgaagaatctgag
gacgcaaactcgcctccaagactatctgtgagcaaaagtataggtaaaagtagtgggcct
gaaaatagtccaactccaatggaaaacaacagggaagagggcaatagctcttcagaaaga
tccaaatctttaggatcatcacgttcaaaaaggaaacctacagttgtaacaaagtatgtt
ggatcagatgatgaacaaaccttacccgaaactgtaaatgaagatgtttcaaatgaaaac
tcagaaaatgatgttgatatgaaaagcttacctaaaggtacagtggttgtacaaccagag
ccagtgctgaatgaagacaaagatgattttaaagggcctgaatttagaagcagaaatatc
gttaaaatgaaacctgaagctcccaaaaagcgtggagaggaaggattgcatggaattgtg
agctgtacagcctgtgggcaacaggtgaaccattttcaaaaggattcaatctatagacat
cctacactgaaagtccttatctgtaagacttgctacaaatattatatgagcgatgacatt
agccgtgattcagatggaatggatgaacagtgtagatggtgtgctgaaggtggaaattta
atttgctgcgacttttgccataatgccttctgcaaaaagtgcattttgcgcaatctgggc
cgaaaggagctctcagccataatggatgaaaataaccaatggcattgctacatttgccac
ccagaacctttgttggacttggtcactgcatgtgacagtgtttttgaaaatttagaacag
ttattgcaacaaaacaagaagaagatcagagttgagagtgagaaaagtaaaatatatgat
cacacgctcaaattttctccaaagagaaatatttcaaattgtaatggagaagaaaagaaa
ttagatgactcatattctggttctttaacctattcctataaagcactaatggtgccaaaa
gacatgcttaaaaagacaaaaaaactggttgagaccacaactaatatgaacgctagtttt
gtaagttttttgaaaacggcagcagaaaattcagaaataaactctaccatacagctacgt
cagctgaaagcttttaaatctgttttgagtgacataaaaaaagttcatttagcattagaa
gaaggtctgaatcaagagattcaagctttggatgttaaaatcaaagagaagaataccaaa
gagaaaaaaactgatattaaactagaaaaaaatgaagtgaaaagagatgaaggaaaggaa
catgcagagttgaaagaggacactgtaaagtcagtgaaaaaagctgtgtcagaacagcct
gacaatgagcccatggaccaaaatgttccagcaacgcaacgaacagaaaacaagaatact
agcagtgaagataaaaagtctgagacaaatgaagagcctcagtatgaacctaatagtact
gaggctttagacatggatattgtgtctgttccttcatcagtccctgaagatatttttgag
actctagaatcggctatggaaactcagagtgcagcagatgaacagggcaatggaagtaca
gcaacagagctggagacagtaaatgttaatataaaatgtgctacagcttcaaaagacatt
aaagggggtaccaagttaaaagcaccagctaaagtaagaaaagaattgtttgtaaaactg
actcctgtttccctttctgattctccagttaaagctgaagatcaagacagtaatccagta
aagggagatcagaatgctgatgtaatacccaaggcagaaaactgtgattctggaaaagaa
aatcattacattggtaatgaacgctcacctgaaaatgaaactgtccccttggtagaggaa
tctgatctcaggaggtctccacgtgtgaagactacacctctgaggcgtcaaacagacatg
aatcctttaacatctaactcagaagaggacagcaatgacgcatactgtgagaagcgcaag
caaaaatcatcaacccagtcaatgagaaaaaaagataaaagaaattcttctgacaacact
actgatcatcctaaacctaataagctttctaaatcaaaaaaatcagacatattggaccaa
agttcggattcagatgagatgccagcagtccttaaagaagtagccatgatgagtcatagt
tcctcggatattgatagcaatagtgagacatccaataatattcagaagaatgctttaaat
gatcgaacgaaacaaccagtgaagtatgagaatggaaagcgcaaaagaaaaagctccact
tctggttcagatttagttgccaaaaaaggcaaatcaactaaaggctccacttctgcaaaa
aagaaacgacagaacccttcagattcttcaaattatgactccgagttagaaagagagata
aagagtttgagtaaaatagagtctgcaaaaaaagccaaaaagaaataccccagaaaagaa
gagaattatgattcttctgaagaagaacagaataaaaaaggatctactagtaagaaaaaa
ataaatttgaagaaacagcaggttgaatcatctgatgatgctgagaagtcatccccagag
aaagaggagactaatcattcttctgaagataaaaaaattaggaaggggacagcagtcaat
gaaaagaaaaacagagatttaaaagaaagaactccgaaggggaagcatgacggatcatct
gatactgagaaatcatccctggagaaagaggagagttgccattcttctgatggtaaaaag
agagtagaagcaaaagaaaagaaaaacagaaatttgaaaaagagaaaggtacagaatgat
tcttctttggacggaactgagaagtctgcagcgaaggagcagagttgtgattcttcagaa
gacaaaaccaagaataaaaaaggaacagaaggtaaagaaaacaaaaaagaaaactcgaaa
aagaaaaataagaaagaacaagatggttcttcttctgatggagataaatcatccccagag
aaaaagagtggcatttcctctgaaaataagagtaaaaatgaaatggcagttgaggaaaag
agagagagaaatttgagagagagaacattgaaaaagttgcagaatgattcatcttcagat
gctgagaagtccccaaagaaagaggagagttcttctgaagatgttaaacagaataaaaaa
cgaatagaagctaaagaaaagaaaaaagtgagccacaaaaagaaaacttccaaaaaagaa
cagaatgactcattgtcctcttctgatgaggagccttatgaagacaataaaaaaaagagt
aaaaagagttccgctaaggagaataaaaagggtaacttaaaagtggaaaaaagaatttct
aaaaaacagaaggatgacatcacctgttcctcctcatcagatgaggaagaaaatgatgac
cagaattcagcaatcgatggaagcagtgatgagcagaagattaagccagtgactgaaagc
ttaatactgtcctccaacacaggattttgtcagtcttcaggggatgaaggagagactaaa
tcgggggctgttccaatggaggaggaggaggatgatgacgatcctgagaatagaattgcc
aagaaaatgcttttagaagaaatcaaagccaatctttcctctgatgaggatgcatcttca
gatgaagaatcagatgaaggaaaaaagaaaactggaaagaaaaatgaaaacgcagaagat
gacgaggagaatgaaaaggaagataattctgaatccgattcagatgatgaagagtctagg
aagcctagatatagacacagactgctgagacacaagctaagtatgagtgatggagaatct
gaggaagaaaaaaagggaaaatctaaagacacaaaagaaggcaaacgcagaaatagaagg
aaagtgagcagtgatgattcagatgactcagaatttcatgaatctggagttagtgaagaa
gtcagcgaatctgaagatgagcaacgtcctagaacaagatctgctaagaaagctgaggca
gaagaaaatcagcgcagttacaagcagaaaaagaaaagacgacgcataaaggttcaggag
gattcttctagcgaaaacaataataagagtaattctgaggatgaagatgacaatgattca
aaatctcctggaaaaggccggaagaaaatacgaaagattcttaaagatgataagcttaga
acagaaacacaaaatgcactgaaggaggaggaagagagaagaaaacgtattgcagaaaga
gaaagagagagagagaaattaagagaggtgatagaaatagaagatgcttcacctctaaag
tgtccgatcacaactaaactggttttagatgaagatgaagaaaccaaagaacctatagta
caggttcacagaaacatagttaccaaactgaaaccacatcaagtagatggtgttcagttc
atgtgggattgctgttgtgaatctgtgaaaaaaacaaagaaatctgcaggttccggatgc
attcttgcccattgcatgggtctaggaaaaacactgcaggtagtgagttttctccataca
gttctgttgtgtgataaactggatttcagcacagctctcgtggtgtgtcctctgaacact
gccttgaactggctgaatgagtttgaaaaatggcaagaaggtttagaagatgatgagaaa
ctagaggtctctgaactagcaactgtaaaacgccctcaagaaagatcctatatgctgcag
cgatggcaggaagatggaggagttatgatcataggctatgagatgtatcgtaatcttgca
caaggcaggaatgtcaaaagtagaaaacttaaggaaatatttaacaaggctctggttgat
ccaggccctgactttgttatatgtgatgaagggcacatattaaaaaatgaagcttctgct
gtttctaaggctatgaattctatacgatccaggaggaggataattcttacaggaacacca
ctgcagaataatcttatagaatatcactgcatggttaattttatcaaggaaaatttgctt
ggatcaattaaggaattcagaaatcggtttataaatccaatccagaatggtcagtgtgca
gactccaccatggtagatgttagggtaatgaagaagcgtgcccacatactgtatgagatg
ctagctggatgtgttcagaggaaagattacacagcattaacaaagttcctgccaccaaaa
tatgaatatgttctagcagttagaatgacatcgattcagtgtaagctgtatcagtactac
ttggatcacttgacaggtgtaggtagtagcagtgaaggtggaagaggcaaagctggagct
aagctcttccaggacttccagatgttaagcagaatctggactcacccttggtgtttgcag
ctggactatattagtaaagaaaataagggctactttgatgaagacagtttggatgagttc
atagcttcagattcagatgaaacttcaatgagtttaagctctgatgattatgctaagaaa
aaaaaacccaaggggaaaaaagcgaagaaagagagtagctcaagtggaagtggaagtgat
aatgatgttgaagtgattaaagtctggaattcaagatctcgtgggggtggagaagggaat
acagaggaacttgcaaacaaccctccattggctgtaaagtcagatgaaggtaaagccaca
tcctcttccaacccaggcagcccagctccagactggtacaaagattttgtcaccgatgca
gatgctgaagtattggaacattctgggaaaatggtgcttctctttgaaattcttcgcatg
gcggaggagcttggagataaagttctagtttttagccagtctctaatatcactggatttg
atagaagattttctggaactggcaagcagggacaaaactgacaaagataaacctgttatt
tataaaggtgaaggaaaatggttcagaaatattgactactatcgtttagatggttcaacc
acggctcagtcaagaaagaaatgggctgaagaatttaatgatgaaactaatgtgagaggc
cgtttgtttattatttccacaaaagcaggatcccttggaattaatctggtggctgctaat
agagtgattatctttgatgcctcttggaatccatcctatgatattcagagtatcttcagg
gtttaccgctttgggcagaacaaacctgtgtttgtgtacaggttcttggctcagggaaca
atggaggacaagatatatgatcgtcaagtaacgaagcagtcactgtctttccgagtagtt
gaccagcagcaggttgagcgtcactttaccatgaatgagcttacagagctttataccttt
gagccagacttgctggatgaccctaattcagaaaagaaaaagaagagggatacacccatg
ctgccaaaggatacaattctggcagaattgcttcagatccacaaagaacatatagtgggc
tatcatgaacatgattccctcctagaccataaagaggaagaagaattaactgaagaggaa
aggaaggcagcttgggcagaatatgaagctgaaaaaaagggtctgaccatgcgcttcaac
atgccagctgggactaatatgccccctatcaatttcaactctcaaactccatatattccg
ttcaatttgggagcattgtcggcaatgagtaaccaacagctagaggacctcattaatcaa
ggaagagaaaaagttgtggaagcaaccaacagtgtaactgcagtgagaattcagcccctt
gaagatataatttcaactatatggaaggagaatctgaccctgacagagacccaagtacag
gccttggccctaagcagacaggcaagccaggagcttgatattaagcgccgagaagccatc
tacaatgatgtcttgacaaaacaacagatgttaatcagttgtgttcagcggatacttatg
aacagaagactacagcagcagtacaatcagcagcagcagcagcaaatgtcttatcaacaa
gcagcaatgagtcatctcatgatgccaaagcctccaaatttaatcatgaatccttccacc
taccagcagatagatatgagaggaatgtatcaggcagtttctggtggtatgcagccaccg
ccattgcagcgtgcaccacccccaatgagaggcaaaaatccaggaccttcccaagggaaa
taa
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integrated database retrieval system
