Chrysemys picta (western painted turtle): 101944402
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Entry
101944402 CDS
T04662
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101944402 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101944402 (NUP54)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101944402 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
101944402
NCBI-ProteinID:
XP_008170025
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MENTIFFLFQTNAACSLSASHLLGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGV
STTSAPPFNFGNSLASAGAFGGFGTTTTAPGSAFSFSAPTNTGTTGLFGATQNKGFGFGT
GFGAAGTGTGLGTGLGTGLGFGGFSTQQQQPTLGGLFSQPAQAPSQSNQLINTASALSAP
TLLGDERDAILAKWNQLQAFWGAGKGYFNTNIAPVEFTQENPFCRFKAVGFSCMPNNKDE
DGLVVLVFNRKEVDIRNQQQQLVESLHKILGGNQTLTVNVEGVKTLPDDQTEVVIYVVER
SPNGTSRRVPATTLYAHFEQVNIKTTLQQLGVTLSMARTELSPAQIKQLLQNPPAGVDPI
IWEQAKVDNPDPEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQTT
TMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQF
KGRLNELMSQIRMQNHFGAVRAEERYYIDADLLQEIKQHLKQQQEGLSHLISIIKDDLED
IKLIEHGLNESIPIRGGIFS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacacaatattttttttgtttcaaactaatgctgcctgctctctttctgcttcc
cacctgttaggatttggtgggcttgagactgcaaactccactgccagtgggtttaatttt
gggggtttcggattaactgccaatcctgcagtgaattttaatattgggaatttcggtgtg
tccactacctcagcgccaccattcaattttggtaacagtctggcaagtgcaggtgcattt
ggaggatttgggacaactaccaccgctcctggatcagcatttagcttttctgctcctacc
aacacaggcaccactggactgtttggtgctacccaaaacaaaggttttggatttggtacc
ggttttggcgcagcaggaactggtaccggcctaggtactggtttaggaactgggttaggc
tttggaggattcagtacccaacagcagcagcccacattaggtggcttgttcagtcagccc
gctcaggcaccttcccagtccaaccagctgataaacacagccagtgctctttctgctccc
acactcttgggagatgagcgagatgctattttggcaaagtggaaccagttgcaagccttc
tggggggcaggcaaaggatattttaacaccaacattgctccggtggagttcacgcaggaa
aacccattttgcagatttaaggctgtgggcttcagttgcatgcccaacaacaaagatgaa
gatggcctggtggtcttagtcttcaatagaaaagaagtagacattcgaaaccagcagcag
cagctagtagaatcactgcacaaaattttgggaggaaaccagacccttacggtcaatgta
gaaggtgttaaaacactgccagatgaccagactgaagtggtcatttatgttgttgagcgg
tcaccaaatgggacttcaaggagagttccagccacgaccctgtacgctcattttgaacaa
gttaacataaaaacaacactgcagcagctcggcgttaccctctccatggccagaacggaa
ctttctccagcacaaatcaaacagcttctacagaatcctcctgctggtgttgatcctatt
atctgggaacaggccaaagtggataatcctgatcctgaaaagcttatccctgtgccaatg
gtaggtttcaaagagctgttgagacggttaaaggtccaagaccagatgactaagcagcat
cagaccagattagatataatatctgaagatattagtgagctgcagaaaaatcagaccaca
accatggcaaaaatagcccagtacaagaggaaactaatggatctttctcacagaacctta
caggtgttaattaaacaagagatccaaaggaaaagtggctatgctattcaggctgatgag
gaacaacttcgtgtacagttagacaccattcagtgtgaactcaatgcacctactcagttc
aagggtcgactaaatgaactgatgtctcagatcaggatgcaaaatcattttggagcagtt
agggctgaagagaggtactacattgatgcagatctcttacaagaaatcaagcaacatttg
aagcagcaacaagaaggcctgagtcatttgattagcataataaaagatgacctggaagat
ataaaactaatagaacatggattgaatgagagcatccctatcagaggaggaatcttcagt
tga
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