Chrysemys picta (western painted turtle): 101944413
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Entry
101944413 CDS
T04662
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101944413 (CSTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101944413 (CSTF1)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101944413 (CSTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WDR55
Beta-prop_EML_2
CSTF1_dimer
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_VPS8
Frtz
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
101944413
NCBI-ProteinID:
XP_023964958
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MAARTGVRRMSGRRVPSACDRRPLPRGLSNLGSPAPEPRPLRLPFLETEAPARHSLLTMY
RTKVSLKDRQQLYKLIISQLLYDGYINIANGLINEIKPQSVCAPSEQLLHLIKLGMENDD
SAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL
IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH
PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR
LYDINTFQCFVSCNPQDQHTDAICSVNYNASANMYVTGSKDACIKLWDGVSNRCITLKET
LLVLLTICPLSNATLLHVFTYTFNEYHIPAIIGAGLSGRQVHRTQAVFNHTEDYVLLPDE
RTISLCCWDSRTAERRNLLSLGHNSIVRCIVHSPTNPGFMTCSDDYRARFWYRRSTTD
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaggacaggtgtgaggaggatgtcaggccgtcgtgttccctcagcgtgtgat
aggcgtccgcttccacggggcctgagtaacttgggctcccccgctcctgagccacggcca
ctgcggctgcctttccttgagactgaggcacccgcaaggcattccttgctcacaatgtat
agaacaaaagtaagcttgaaagatcgtcaacaactttacaaactgattattagtcaattg
ctgtatgatggatacataaacattgccaatggcctgataaatgagataaaaccacaatca
gtctgcgcaccctctgaacaactgctgcatctgattaaactaggaatggagaatgatgac
agcgcagttcaatatgcaattggacgctccgacacagtagctccaggaacagggattgac
ttagaattcgatgcagatgtccagactatgtcccccgaggcttctgaatatgagacctgt
tacgtcacatctcataaaggaccatgtcgcgtagctacatacagcagagacgggcagtta
atagctacgggatctgctgatgcctcaataaaaattcttgatacagagagaatgttggca
aaaagtgctatgcccatcgaggtcatgatgaatgagacagcacagcagaatatggaaaat
catcctgttattcggactctatatgatcatgtggatgaggttacatgtttagctttccat
ccaacagaacagatcctggcatctggttcaagggactatacgcttaaattgtttgactat
tcaaaaccttctgccaaaagagccttcaagtatatccaggaagcagaaatgttacgctcc
atttcttttcatccttctggcgacttcatacttgttggtacccagcaccctaccttacgg
ctttatgatatcaatacattccagtgttttgtgtcttgcaatcctcaagatcaacacacc
gacgctatatgttcagtaaactataatgcaagtgctaacatgtatgtgacaggaagcaag
gatgcatgcatcaaattatgggatggtgtttcaaatcgatgtatcactctaaaagagaca
ctccttgtgcttttgacaatctgccccctaagcaacgctactctgttacacgtttttact
tacacctttaatgagtatcatatccctgctattataggagctggtttgagtggacgacaa
gtacacagaacacaggcagtctttaaccacacagaggactatgtgttacttcctgatgaa
aggaccataagtctctgctgctgggactcaagaactgcagaacggcgaaatcttctgtca
ttggggcataacagcattgttcggtgtattgttcattctcctaccaatcctggtttcatg
acctgcagtgatgactacagagctcgattttggtaccgaaggtcaaccacagactaa
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