Chrysemys picta (western painted turtle): 101944653
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Entry
101944653 CDS
T04662
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03030
DNA replication
cpic03420
Nucleotide excision repair
cpic03430
Mismatch repair
cpic03440
Homologous recombination
cpic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101944653 (RPA1)
03420 Nucleotide excision repair
101944653 (RPA1)
03430 Mismatch repair
101944653 (RPA1)
03440 Homologous recombination
101944653 (RPA1)
03460 Fanconi anemia pathway
101944653 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpic03000
]
101944653 (RPA1)
03032 DNA replication proteins [BR:
cpic03032
]
101944653 (RPA1)
03400 DNA repair and recombination proteins [BR:
cpic03400
]
101944653 (RPA1)
Transcription factors [BR:
cpic03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101944653 (RPA1)
DNA replication proteins [BR:
cpic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
101944653 (RPA1)
DNA repair and recombination proteins [BR:
cpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
101944653 (RPA1)
MMR (mismatch excision repair)
101944653 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
101944653 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
101944653
NCBI-ProteinID:
XP_005298337
UniProt:
A0A8C3I8V9
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MSARLSEGAIAAIMQGENNLKPVLQVINIRAIATGNGPSRYRVLMSDGVNTLSSFMLATQ
LNSLIEEERLSAHCICQVNRYIVNSLKDGRRVIILMDLDVLKTADVVGANIGNPVPYNEG
QGHQQQRSSAPAASPTHSKPQQQNGNSAVGPTTTKYLGPSKQFGKAGGTSFLSTPGGSQS
KVVPIASLNPYQSKWTICARVTQKGQVRTWSNSRGEGKLFSIELVDESGEIRATAFNDQV
DKFFPLIELNKVYYFTKGHLKTANKQYTAVKNDYEITFHNETSVVPCEDAQHLPSVQFEF
VPISDLENTCKDSIVDIIGVCKSYEDISKITVKSSNREVSKRNVHLMDTSGKMVTATLWG
DEAERFDGSRQPVVAIKGARVSDFGGRSLSVLSSSTVVVNPDSPEAFKLRGWFDSEGQLL
ECTSISDLRGGPTTGGNTNWKTLHEAKSENLGQGDKADYFSCVGTVVFLRKENCMYQACP
SQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADCQENQWVTCFQESAEVILGQ
NAAFLGELKEKNEQAFEEVFQNANFSSYEFRIRVKLETYNDESRIKATVMDVKPVNHKEY
SKRLIMNIRKNAVQLG
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcggctgagcgagggggccatcgcggccataatgcagggagaaaataattta
aagcctgtcctccaagtcattaacatccgtgccatcgccacaggaaatgggccatctcgt
taccgtgtgctgatgagcgatggggtgaacacgctttcctctttcatgttggctacacag
ctgaattctctaattgaagaggagcgcttgtctgcccactgtatctgccaggttaacaga
tacattgttaacagcctgaaagatggaaggagagtgattatattgatggatttagatgtt
ctgaaaacagctgatgtggttggtgcaaatattggcaatccagtaccatacaatgaagga
caggggcaccagcagcaacgttcctcagctccagcagccagcccaacacacagcaaacca
cagcagcagaatggaaattcagcagtaggccccactactactaagtaccttggtccctca
aagcagtttggtaaagcaggtggtactagcttcttgagcacccctggtggatcacagtcc
aaagtggtaccaattgccagtctgaacccataccaatccaaatggaccatttgtgctcgt
gttacccaaaaaggccaggttcgcacatggagcaactcccgtggtgaaggaaagctgttc
tctatagagctggttgatgaaagtggtgaaattagagctactgctttcaatgatcaagtg
gacaagttctttcccctcattgaattgaacaaggtgtattacttcaccaaaggccatctg
aagacggctaacaagcagtacacagctgtgaaaaatgactatgagatcacattccataat
gagacttctgttgtaccctgtgaggatgctcagcaccttccttcggttcagtttgagttt
gtgcccatctctgacttggagaacacatgcaaagactcaattgtcgacataattggagtc
tgtaagagctatgaagacatctctaaaattacagtaaaatctagcaatagggaggtgtcc
aagaggaatgtgcatttgatggatacatctgggaagatggtgacagctactctgtgggga
gatgaggctgaaagatttgatggttctagacaacctgtggtagccatcaaaggagccaga
gtctctgatttcggtggccggagtctctctgttctgtcctcgagcacagttgtggtgaac
ccagatagtccagaggcatttaagctccgaggatggtttgactctgaagggcagcttttg
gaatgtacctcaatctctgatctgagaggtggaccaacaactgggggaaataccaactgg
aaaactttgcatgaagctaaatctgaaaatttgggacaaggagataaggcagattatttt
agctgcgtgggcacagtggtattcctgcgcaaagagaactgcatgtaccaggcatgtccc
tctcaggactgcaataagaaagtgatagaccaacaaaatggactgtatcgctgtgagaaa
tgcgatcgcgagttccccaacttcaagtatcgcatgatactctcggtgaacattgcagac
tgtcaggagaatcagtgggtgacttgttttcaggagtcagcagaggtcattcttgggcaa
aatgctgctttcctgggagaactgaaagaaaagaatgagcaggcatttgaggaagtgttc
caaaatgccaacttcagctcatacgaattcaggatcagagtcaagctggagacttacaat
gatgaatctcgtattaaagccacagtaatggatgtgaagcctgtgaaccacaaagaatac
agcaagaggctgatcatgaacatcagaaaaaacgcagtacagctaggataa
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integrated database retrieval system
