Chrysemys picta (western painted turtle): 101944762
Help
Entry
101944762 CDS
T04662
Symbol
IFT88
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpic03037
]
101944762 (IFT88)
Cilium and associated proteins [BR:
cpic03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
101944762 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_12
TPR_19
TPR_6
TPR_7
TPR_14
TPR_16
ANAPC3
TPR_17
ARM_TT21_4th
TPR_11
TPR_9
TPR_CcmH_CycH
ARM_TT21_5th
TPR_10
TPR-S
TPR_15
HAT_PRP39_C
DUF6584
ARM_TT21
HEAT_Nup120
Consortin_N
ARM_TT21_2nd
ARM_TT21_C
Coatomer_E
TPR_21
Motif
Other DBs
NCBI-GeneID:
101944762
NCBI-ProteinID:
XP_005304444
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MMQNVHLAPKADEDDLYSGYNDYNPTFDTEDLENDTAFQQAVRTSHGRRPPMTAKIPGTS
ASRPLATGFGSKTALSSSMGRPMTGAVQDGVARPLTAVHAAGYTKAALRGSVFDPLGQAR
GPAPPLEMKNEDTPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQIASPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNGGRLKVNMA
NIYLKQRNYSKAIKFYRMALDQIPNVHKEMRIKIMQNIGVAFIKTGQYTDGISSFEHIMS
TSPNLKAGFNLILCYFAIGDREQMKKAFQKLITVPLEIDYDDKYISPNDDPHTNLLIEAI
KNDQLRQMERERKGMAEKYIMTAAKLIAPAIETSFAIGYDWCVEVVKASHYVELANDLEI
NKAITYLRQKDFYQAVETLKMFEKKDSRVKSAAATNLSFLYYLENELAQAANYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRIDEALD
CFLKLQAILRNSAQVLYQIASLYEIMEDPNQAIEWLMQLISVVPTDSHALSKLGELYDNE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIQPTQVKWQLM
VASCYRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDMGLKEVQEYVTKLKRVEKL
KEIREQRVKSGRDGSARSRREGSGSGDSGGSAKGERLSAKLRALPGTNEPYESSGNKEID
ASYVDPLGPQTERPKTAARKRMDEDEFADEELGEDLLPE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtccacctggcacctaaagcagatgaagatgatctttattctggctac
aatgactataaccccacctttgacacagaggatttagaaaatgacacagcttttcagcag
gctgtgagaactagtcatggtagaagacccccaatgacagccaaaattccaggcacatca
gcttcacgacctttagctactgggtttgggtcaaagaccgcattatcatcatcaatggga
agaccaatgacaggagctgtacaggatggagttgctcgacctctgacagcagttcatgca
gcaggttacactaaagcagctttgagaggttctgtatttgatccccttggtcaagcaaga
ggtcctgctcctcctttagaaatgaaaaatgaagatactccagaagaaaagattagacag
ttagaaaaaaaagtgaatgagttggttgaagaaagctgcattgccaacagctgtggagac
ttaaaattggctctggaaaaggcaaaagatgctggaagaaaggaaagagtgttggtgagg
caacgtgaacaaattgcatctccagaaaacatcaacttagatctcacttactcagttctt
ttcaacttggccagccaatattctgctaatgaaatgtatgctgaagcactaaatacatat
caagtcatagtgaaaaataagatgttcagcaatggaggcagactgaaggtgaatatggca
aacatttatttaaaacaacgaaactattcaaaagctatcaaattctaccgcatggctcta
gatcagattccaaatgtccataaagaaatgaggattaaaataatgcagaacattggagtt
gcatttattaaaactggccagtacactgatggcattagttcctttgaacacataatgagc
acatctccaaacctgaaagcaggcttcaacctgattctttgttattttgccattggagac
cgtgaacaaatgaaaaaagctttccaaaaactgatcactgttccactggaaattgattat
gatgacaaatatatttcaccaaatgatgatccacatactaacctattgattgaagccatt
aaaaatgatcaattacggcaaatggaacgtgaaaggaaaggcatggcagaaaaatatatc
atgacagctgcaaaattgattgcaccagcgattgaaacctcctttgctataggctatgac
tggtgtgttgaagtagtaaaagcttcccactatgtagagttagccaatgacctggaaata
aataaagcaattacatatttgaggcaaaaggacttctatcaggctgtggagactttaaaa
atgtttgaaaaaaaggatagcagagtaaaaagtgcagctgcaacaaacctttcatttctt
tattatttggagaatgaattagcacaagcagccaactatgcagatttagctgtgaattct
gatagatacaacccatcagctctcactaataaaggaaatactgtgtttgcaaatggagac
tatgaaaaagcagcagagttttataaggaagctctacggaatgattcctcatgcactgaa
gcactttacaatataggtttaacatataaaaagttaaacagaatagacgaggctttggat
tgttttctgaaacttcaggcaatccttcgaaacagtgcccaagttctctaccaaatagca
agcttatatgaaataatggaggatcccaaccaagccatagagtggctcatgcagcttatc
agtgtagttccaactgattcacatgcactgtcgaaactaggggaattgtatgataacgaa
ggcgataaatcccaagcttttcagtattactatgagtcatatcggtatttcccttcgaac
attgaggtcattgaatggcttggagcctattacattgatacccagttttgtgaaaaagcc
attcagtactttgagagagcagcgcttattcaaccaacacaagtaaaatggcaattgatg
gttgctagttgttacagaagaagtggtaactaccaaaaagctctagatacatataaggag
atacacagaaaatttccagagaatgttgaatgtctacggttcttagttcgactctgcaca
gatatggggctgaaggaagttcaagaatatgtgacaaagctcaagagagtggaaaaacta
aaagaaataagggaacagcgtgttaaatctggcagagatggcagtgcgcgtagccgcaga
gaagggagtggtagtggggatagtggcggtagtgctaagggggaacgactaagtgccaag
ctaagggctttgcctggaacaaatgagccttatgaaagcagcggtaataaagaaatagat
gcttcctatgtagatccacttggaccacaaacagagagaccaaaaactgcagcaagaaaa
agaatggatgaagatgagtttgctgatgaagaattaggagaggatttgcttccagaataa
DBGET
integrated database retrieval system
